Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 5.3e-78 294.3 147 100.0
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 7.2e-43 177.6 123 77.2
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 8.8e-41 170.6 99 82.8
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.5e-40 169.9 99 83.8
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 2.0e-40 169.5 99 82.8
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.0e-40 169.5 100 81.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 4.4e-40 168.3 154 66.2
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 7.4e-40 167.5 99 84.8
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.7e-39 166.4 99 81.8
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.7e-39 166.4 99 81.8
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.7e-39 166.4 99 81.8
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 2.2e-39 166.0 144 66.7
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 3.7e-39 165.2 99 80.8
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 6.3e-39 164.5 139 63.3
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.1e-38 163.7 99 79.8
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 1.4e-38 163.3 95 83.2
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.8e-38 162.9 114 71.1
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.8e-38 162.9 106 75.5
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.4e-38 162.5 157 59.9
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 3.1e-38 162.2 106 74.5
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.1e-38 161.8 136 62.5
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 4.1e-38 161.8 94 81.9
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 5.3e-38 161.4 109 74.3
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 5.3e-38 161.4 134 62.7
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 7.0e-38 161.0 93 83.9
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 7.0e-38 161.0 99 78.8
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 9.1e-38 160.6 97 81.4
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 9.1e-38 160.6 104 78.8
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.2e-37 160.2 97 78.4
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.6e-37 159.8 100 77.0
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.6e-37 159.8 93 82.8
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.6e-37 159.8 93 82.8
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.6e-37 159.8 93 82.8
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.0e-37 159.5 93 82.8
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 2.0e-37 159.5 96 81.2
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.6e-37 159.1 135 63.0
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.6e-37 159.1 93 82.8
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 2.6e-37 159.1 93 79.6
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 4.5e-37 158.3 110 72.7
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 4.5e-37 158.3 94 79.8
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 4.5e-37 158.3 126 66.7
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 4.5e-37 158.3 93 81.7
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 5.9e-37 157.9 137 59.9
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 7.7e-37 157.5 96 80.2
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 7.7e-37 157.5 96 80.2
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 7.7e-37 157.5 96 80.2
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.0e-36 157.1 96 79.2
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.0e-36 157.1 96 79.2
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.0e-36 157.1 148 60.8
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.0e-36 157.1 148 60.8
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.3e-36 156.8 96 79.2
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.3e-36 156.8 96 79.2
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.3e-36 156.8 96 78.1
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 1.3e-36 156.8 131 62.6
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.7e-36 156.4 93 79.6
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.7e-36 156.4 144 59.7
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 2.9e-36 155.6 124 65.3
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 2.9e-36 155.6 94 78.7
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 5.0e-36 154.8 96 78.1
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 6.5e-36 154.5 94 78.7
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 6.5e-36 154.5 128 64.8
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.1e-35 153.7 96 77.1
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.5e-35 153.3 104 75.0
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.5e-35 153.3 93 78.5
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.5e-35 153.3 110 71.8
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.5e-35 153.3 110 73.6
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.5e-35 152.5 102 75.5
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 3.2e-35 152.1 99 77.8
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 5.5e-35 151.4 93 76.3
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 7.2e-35 151.0 93 77.4
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 7.2e-35 151.0 102 74.5
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 9.4e-35 150.6 94 76.6
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 9.4e-35 150.6 94 76.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 2.1e-34 149.4 94 75.5
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.1e-34 149.4 94 75.5
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.1e-34 149.4 94 75.5
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 2.7e-34 149.1 117 67.5
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 5.2e-33 144.8 100 71.0
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 6.7e-33 144.4 100 73.0
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.8e-33 144.1 99 71.7
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.5e-32 143.3 138 55.1
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 3.3e-32 142.1 98 67.3
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.3e-31 140.2 105 67.6
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.3e-31 140.2 116 60.3
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 2.2e-31 139.4 93 72.0
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.1e-30 135.6 99 71.7
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.0e-28 130.6 98 64.3
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 5.0e-28 128.3 71 85.9
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 6.5e-28 127.9 79 77.2
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 7.2e-27 124.4 99 62.6
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 3.6e-26 122.1 73 76.7
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 5.2e-25 118.2 127 52.8
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 7.5e-24 114.4 64 84.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 4.8e-23 111.7 87 63.2
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 6.3e-23 111.3 76 72.4
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 5.4e-22 108.2 63 81.0
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.6e-21 106.7 63 77.8
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.0e-21 106.3 62 79.0
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.0e-17 94.0 70 64.3
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 7.0e-06 54.7 48 60.4
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 9.2e-06 54.3 73 43.8


User provided reference genes

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