Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g8909 Utricularia gibba HOM05D003503 ORTHO05D003885 1.8e-108 396.0 200 100.0
unitig_749.g14030 Utricularia gibba HOM05D003503 ORTHO05D003885 2.2e-42 176.4 122 73.0
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.4e-33 147.1 137 57.7
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 3.5e-32 142.5 136 57.4
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 5.6e-30 135.2 150 56.7
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 2.8e-29 132.9 186 45.2
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 2.4e-25 119.8 158 46.8
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 3.0e-23 112.8 146 49.3
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 5.6e-22 108.6 165 43.0
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 4.0e-20 102.4 151 46.4
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.2e-19 100.9 146 47.3
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 5.8e-19 98.6 147 46.3
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 4.9e-18 95.5 142 48.6
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 6.4e-18 95.1 168 41.1
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 2.1e-16 90.1 158 38.6
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 7.8e-16 88.2 148 43.9
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.3e-15 87.4 151 41.7
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 1.3e-15 87.4 153 42.5
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 1.3e-15 87.4 153 42.5
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 1.7e-15 87.0 150 41.3
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.3e-15 86.7 144 42.4
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 2.3e-15 86.7 132 45.5
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 8.6e-15 84.7 136 41.9
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 8.6e-15 84.7 155 41.3
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 1.5e-14 84.0 145 42.8
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 2.5e-14 83.2 147 44.2
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 3.3e-14 82.8 154 37.7
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 5.6e-14 82.0 151 38.4
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 7.3e-14 81.6 142 40.1
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 9.5e-14 81.3 138 42.0
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.2e-13 80.9 137 43.8
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 2.8e-13 79.7 155 39.4
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.8e-13 79.7 156 40.4
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 3.6e-13 79.3 139 38.8
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 4.7e-13 79.0 152 44.1
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 8.1e-13 78.2 146 41.1
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 8.1e-13 78.2 141 39.0
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.4e-12 77.4 95 47.4
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 1.8e-12 77.0 128 42.2
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 1.8e-12 77.0 151 36.4
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.4e-12 76.6 153 35.9
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 3.1e-12 76.3 130 41.5
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 5.2e-12 75.5 146 37.7
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 1.2e-11 74.3 147 39.5
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 1.2e-11 74.3 154 35.1
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 1.5e-11 73.9 135 39.3
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 1.5e-11 73.9 147 40.1
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.0e-11 73.6 146 36.3
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 4.4e-11 72.4 151 37.1
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.4e-11 72.4 151 37.7
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 4.4e-11 72.4 150 40.0
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 4.4e-11 72.4 144 41.7
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 5.8e-11 72.0 147 42.2
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 7.6e-11 71.6 104 46.2
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 7.6e-11 71.6 146 37.0
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.7e-10 70.5 146 39.0
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.7e-10 70.5 146 39.0
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 2.2e-10 70.1 136 37.5
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 2.9e-10 69.7 141 39.0
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 3.8e-10 69.3 147 40.8
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 4.9e-10 68.9 138 37.7
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 4.9e-10 68.9 146 37.7
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 4.9e-10 68.9 147 38.1
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 4.9e-10 68.9 130 40.0
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 4.9e-10 68.9 146 36.3
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.4e-10 68.6 155 38.1
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 8.4e-10 68.2 132 40.2
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.1e-09 67.8 94 47.9
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 1.1e-09 67.8 120 38.3
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 1.9e-09 67.0 156 37.2
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 1.9e-09 67.0 136 41.2
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 2.4e-09 66.6 154 37.0
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 3.2e-09 66.2 136 39.0
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 3.2e-09 66.2 151 39.1
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 3.2e-09 66.2 135 37.8
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 4.1e-09 65.9 142 34.5
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 5.4e-09 65.5 142 34.5
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 5.4e-09 65.5 133 39.1
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 7.1e-09 65.1 136 39.7
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 7.1e-09 65.1 139 38.8
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 9.2e-09 64.7 143 37.1
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 9.2e-09 64.7 140 36.4
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.6e-08 63.9 151 37.1
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.6e-08 63.9 151 37.1
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 1.6e-08 63.9 144 34.0
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 2.1e-08 63.5 134 38.1
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.1e-08 63.5 155 36.1
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 2.1e-08 63.5 128 40.6
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 2.1e-08 63.5 138 38.4
CSS0008617 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.7e-08 63.2 85 47.1
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 3.5e-08 62.8 152 36.8
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 6.0e-08 62.0 130 38.5
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 6.0e-08 62.0 141 36.2
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.8e-08 61.6 155 35.5
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.8e-08 61.6 145 37.9
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 7.8e-08 61.6 144 33.3
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 1.0e-07 61.2 130 37.7
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 1.0e-07 61.2 130 37.7
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 1.0e-07 61.2 106 38.7
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 1.7e-07 60.5 152 34.9
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 1.7e-07 60.5 139 38.1
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 1.7e-07 60.5 157 35.0
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 3.0e-07 59.7 149 33.6
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 3.0e-07 59.7 137 37.2
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 3.0e-07 59.7 146 34.9
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 3.0e-07 59.7 79 49.4
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 3.9e-07 59.3 147 33.3
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 5.1e-07 58.9 138 34.8
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 5.1e-07 58.9 133 36.1
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 5.1e-07 58.9 147 34.0
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 5.1e-07 58.9 136 33.1
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 6.6e-07 58.5 139 34.5
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.1e-06 57.8 155 31.6
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 1.5e-06 57.4 129 37.2
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 1.5e-06 57.4 129 37.2
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 1.5e-06 57.4 129 37.2
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 1.5e-06 57.4 141 36.9
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 1.9e-06 57.0 144 34.0
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 1.9e-06 57.0 140 36.4
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 2.5e-06 56.6 145 36.6
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 2.5e-06 56.6 162 34.6
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 2.5e-06 56.6 144 34.0
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 3.3e-06 56.2 162 34.6
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 3.3e-06 56.2 72 44.4
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 3.3e-06 56.2 137 38.0
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 4.3e-06 55.8 149 29.5
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 4.3e-06 55.8 134 36.6
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 4.3e-06 55.8 137 32.8
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 5.6e-06 55.5 141 35.5
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 5.6e-06 55.5 123 32.5
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 5.6e-06 55.5 138 34.8
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 9.6e-06 54.7 144 33.3


User provided reference genes

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