Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10455 Utricularia gibba HOM05D000094 ORTHO05D001414 5.9e-55 217.2 106 100.0
MSTRG.15758 Avicennia marina HOM05D000094 ORTHO05D001414 3.4e-10 68.6 74 51.4
MSTRG.23304 Avicennia marina HOM05D000094 ORTHO05D001414 4.4e-10 68.2 70 51.4
CAN.G860.7 Capsicum annuum HOM05D000094 ORTHO05D001414 7.6e-10 67.4 68 45.6
Nitab4.5_0000184g0090 Nicotiana tabacum HOM05D000094 ORTHO05D001414 1.3e-09 66.6 69 47.8
Nitab4.5_0005374g0010 Nicotiana tabacum HOM05D000094 ORTHO05D001414 1.7e-09 66.2 70 47.1
TAR625G0241 Trochodendron aralioides HOM05D000094 ORTHO05D001414 2.2e-09 65.9 71 45.1
PGSC0003DMG400019698 Solanum tuberosum HOM05D000094 ORTHO05D001414 4.9e-09 64.7 69 46.4
Dinv19462 Davidia involucrata HOM05D000094 ORTHO05D001414 8.4e-09 63.9 74 48.6
TAR381G0723 Trochodendron aralioides HOM05D000094 ORTHO05D001414 8.4e-09 63.9 68 44.1
Nn5g28822 Nelumbo nucifera HOM05D000094 ORTHO05D001414 1.9e-08 62.8 71 39.4
MSTRG.2522 Avicennia marina HOM05D000094 ORTHO05D001414 2.4e-08 62.4 51 56.9
Cc07_g16580 Coffea canephora HOM05D000094 ORTHO05D001414 2.4e-08 62.4 56 58.9
Dinv04770 Davidia involucrata HOM05D000094 ORTHO05D001414 2.4e-08 62.4 72 45.8
Actinidia04637 Actinidia chinensis HOM05D000094 ORTHO05D001414 3.2e-08 62.0 67 46.3
CDE06G1427 Ceratophyllum demersum HOM05D000094 ORTHO05D001414 3.2e-08 62.0 68 38.2
Lsat_1_v5_gn_2_67280 Lactuca sativa HOM05D000094 ORTHO05D001414 3.2e-08 62.0 69 40.6
Peaxi162Scf00025g00342 Petunia axillaris HOM05D000094 ORTHO05D001414 4.1e-08 61.6 65 47.7
Ah.03g140050 Amaranthus hybridus HOM05D000094 ORTHO05D001414 7.1e-08 60.8 76 39.5
Oeu028358.1 Olea europaea HOM05D000094 ORTHO05D001414 1.2e-07 60.1 71 47.9
AUR62012211 Chenopodium quinoa HOM05D000094 ORTHO05D001414 2.1e-07 59.3 54 42.6
Migut.H02451 Erythranthe guttata HOM05D000094 ORTHO05D001414 2.1e-07 59.3 55 50.9
EL10Ac6g15221 Beta vulgaris HOM05D000094 ORTHO05D001414 2.7e-07 58.9 55 40.0
MBI04_g08944_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D001414 2.7e-07 58.9 78 38.5
Ah.02g123710 Amaranthus hybridus HOM05D000094 ORTHO05D001414 3.5e-07 58.5 76 39.5
CDE07G2067 Ceratophyllum demersum HOM05D000094 ORTHO05D001414 3.5e-07 58.5 60 40.0
Eucgr.I00303 Eucalyptus grandis HOM05D000094 ORTHO05D001414 4.6e-07 58.2 84 41.7
Solyc04g051510.1 Solanum lycopersicum HOM05D000094 ORTHO05D001414 4.6e-07 58.2 70 44.3
Sopen04g022890 Solanum pennellii HOM05D000094 ORTHO05D001414 4.6e-07 58.2 70 44.3
Ah.16g103160 Amaranthus hybridus HOM05D000094 ORTHO05D001414 6.0e-07 57.8 72 34.7
Glyma.04G218300 Glycine max HOM05D000094 ORTHO05D001414 7.8e-07 57.4 72 41.7
Lj2C568T3 Lonicera japonica HOM05D000094 ORTHO05D001414 7.8e-07 57.4 72 44.4
Actinidia01378 Actinidia chinensis HOM05D000094 ORTHO05D001414 1.0e-06 57.0 76 40.8
Cfa002779 Carpinus fangiana HOM05D000094 ORTHO05D001414 1.0e-06 57.0 72 40.3
MD15G1336800 Malus domestica HOM05D000094 ORTHO05D001414 1.3e-06 56.6 51 51.0
AUR62003647 Chenopodium quinoa HOM05D000094 ORTHO05D001414 1.7e-06 56.2 73 38.4
Lsat_1_v5_gn_4_138061 Lactuca sativa HOM05D000094 ORTHO05D001414 1.7e-06 56.2 69 39.1
Lj4P862T5 Lonicera japonica HOM05D000094 ORTHO05D001414 1.7e-06 56.2 52 44.2
SGA_v2.0_scaffold2G01278 Striga asiatica HOM05D000094 ORTHO05D001414 2.3e-06 55.8 51 52.9
SGA_v2.0_scaffold51G18761 Striga asiatica HOM05D000094 ORTHO05D001414 2.3e-06 55.8 74 41.9
CiPaw.03G132300 Carya illinoinensis HOM05D000094 ORTHO05D001414 3.0e-06 55.5 49 53.1
FAN26G1281 Fragaria x ananassa HOM05D000094 ORTHO05D001414 3.0e-06 55.5 69 40.6
CDE02G3463 Ceratophyllum demersum HOM05D000094 ORTHO05D001414 5.1e-06 54.7 72 37.5
Aa31LG6G15880 Aethionema arabicum HOM05D000094 ORTHO05D001414 6.6e-06 54.3 69 39.1
AUR62022844 Chenopodium quinoa HOM05D000094 ORTHO05D001414 6.6e-06 54.3 75 40.0
Duzib147G1056 Durio zibethinus HOM05D000094 ORTHO05D001414 8.6e-06 53.9 58 41.4
Rhsim08G0005000 Rhododendron simsii HOM05D000094 ORTHO05D001414 8.6e-06 53.9 71 40.8
Sc07g0001590 Simmondsia chinensis HOM05D000094 ORTHO05D001414 8.6e-06 53.9 55 41.8


User provided reference genes

Program Settings