Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 0.0e+00 1782.7 880 100.0
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.5e-159 567.8 1044 37.4
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 1.3e-142 511.5 1104 35.0
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 1.3e-136 491.5 1124 34.3
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 4.2e-122 443.4 1153 33.1
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 9.1e-117 425.6 1011 34.2
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 5.2e-112 409.8 1018 33.8
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 1.2e-95 355.5 1188 27.9
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 1.3e-94 352.1 1156 29.7
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 2.0e-92 344.7 1048 30.9
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 2.7e-92 344.4 1154 28.0
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 4.7e-89 333.6 1177 27.3
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.0e-88 330.5 1207 28.2
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 3.4e-87 327.4 1234 27.9
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 9.2e-85 319.3 1305 26.7
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 1.6e-84 318.5 1259 25.6
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 4.7e-81 307.0 1329 25.9
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 8.9e-80 302.8 1333 25.7
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 2.2e-78 298.1 1357 25.9
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 2.9e-78 297.7 1307 25.6
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.3e-75 288.9 1290 25.6
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 1.7e-75 288.5 1216 26.3
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 1.6e-73 282.0 1290 26.4
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 2.8e-73 281.2 1306 25.0
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 4.7e-73 280.4 1179 26.3
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 1.4e-72 278.9 1314 25.3
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 3.1e-72 277.7 1233 26.8
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 5.2e-72 276.9 1285 25.1
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 1.3e-70 272.3 1303 25.0
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 4.9e-70 270.4 1216 26.2
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 4.6e-68 263.8 1256 25.3
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 8.6e-67 259.6 1287 24.0
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 1.5e-66 258.8 1250 25.1
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 4.3e-66 257.3 1235 24.7
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 4.3e-66 257.3 1392 24.3
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 7.3e-66 256.5 1206 26.0
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 9.5e-66 256.1 1323 25.0
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 1.6e-65 255.4 1354 24.7
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 2.8e-65 254.6 1250 24.4
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 1.1e-64 252.7 1243 25.3
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 1.1e-64 252.7 1158 25.4
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.8e-64 251.9 1540 23.2
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 5.2e-64 250.4 1182 24.5
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 3.4e-63 247.7 1335 24.0
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 3.4e-63 247.7 1017 25.9
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 2.9e-62 244.6 1299 24.1
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 4.9e-62 243.8 1152 25.1
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 1.1e-61 242.7 1020 25.3
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.9e-61 241.9 1194 25.3
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.2e-60 239.2 1258 24.2
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.6e-60 238.8 1121 25.5
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 2.1e-60 238.4 1295 24.2
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 2.1e-60 238.4 1270 25.7
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 4.6e-60 237.3 1230 25.4
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 3.9e-59 234.2 1295 23.9
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 2.5e-58 231.5 1280 24.0
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 2.5e-58 231.5 1300 23.6
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 1.6e-57 228.8 1220 24.5
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 4.7e-57 227.3 1277 24.3
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 4.7e-57 227.3 1277 24.3
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.2e-57 226.9 1322 23.3
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 1.1e-56 226.1 1281 24.9
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 2.4e-56 224.9 1253 24.4
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 4.0e-56 224.2 1249 23.1
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 1.2e-55 222.6 1198 24.7
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 1.2e-55 222.6 438 35.2
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 1.5e-55 222.2 1091 24.6
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 4.4e-55 220.7 1286 24.2
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 3.8e-54 217.6 1444 22.0
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 3.2e-53 214.5 1266 24.0
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 7.1e-53 213.4 1216 23.8
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 3.9e-51 207.6 1396 22.7
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.5e-50 205.7 415 33.0
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 1.5e-50 205.7 472 33.1
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 5.3e-48 197.2 851 24.9
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 1.2e-47 196.1 426 32.9
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 1.7e-46 192.2 520 32.7
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 4.9e-46 190.7 455 34.3
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.4e-45 189.1 462 32.7
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.9e-45 188.7 381 35.4
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 4.2e-45 187.6 1117 23.8
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 7.8e-44 183.3 420 31.9
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 2.5e-42 178.3 1161 23.2
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 1.3e-41 176.0 461 32.1
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.8e-41 174.9 371 32.9
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 6.2e-41 173.7 458 32.5
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 3.1e-40 171.4 466 30.5
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 9.0e-40 169.9 1191 23.7
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 7.6e-39 166.8 375 35.2
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 9.9e-39 166.4 1167 22.6
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.3e-38 166.0 458 29.0
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 1.3e-38 166.0 445 32.8
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.7e-38 165.6 208 46.6
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 4.9e-38 164.1 435 33.1
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.9e-37 162.2 230 42.2
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 5.4e-37 160.6 223 44.4
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 4.6e-36 157.5 481 31.4
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 6.0e-36 157.1 429 29.1
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.0e-35 156.4 233 40.3
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 1.1e-34 152.9 386 28.2
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 1.9e-34 152.1 514 27.8
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 9.6e-34 149.8 129 61.2
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 2.2e-30 138.7 460 30.4
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 3.5e-28 131.3 283 31.8
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 6.7e-27 127.1 149 43.6
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 6.2e-25 120.6 384 25.8
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 1.8e-24 119.0 208 39.9
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 2.6e-23 115.2 125 49.6
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 1.0e-22 113.2 233 31.8
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.0e-22 113.2 123 48.8
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 9.3e-21 106.7 267 28.1
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 3.0e-19 101.7 190 35.3
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.1e-16 93.2 124 39.5
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.1e-16 93.2 124 39.5
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 5.3e-16 90.9 89 53.9
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 9.0e-16 90.1 335 29.3
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.5e-15 87.8 149 37.6
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.7e-12 78.6 154 36.4
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 6.1e-12 77.4 84 50.0
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 6.1e-12 77.4 116 36.2
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 5.1e-11 74.3 77 51.9
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.5e-10 72.8 57 63.2
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 2.0e-10 72.4 90 44.4
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 2.8e-09 68.6 160 30.0
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.8e-09 67.8 61 57.4
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.4e-08 66.2 57 57.9
Eucgr.G02429 Eucalyptus grandis HOM05D004942 ORTHO05D005687 2.4e-08 65.5 63 54.0
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 3.1e-08 65.1 132 31.1


User provided reference genes

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