Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10191 Utricularia gibba HOM05D001741 ORTHO05D002196 2.5e-50 201.8 105 100.0
unitig_22.g5542 Utricularia gibba HOM05D001741 ORTHO05D002196 3.7e-17 91.7 57 84.2
SGA_v2.0_scaffold63G21667 Striga asiatica HOM05D001741 ORTHO05D002196 9.5e-13 77.0 56 71.4
Oeu000634.1 Olea europaea HOM05D001741 ORTHO05D002196 6.1e-12 74.3 56 69.6
SalBow8G5527 Salvia bowleyana HOM05D001741 ORTHO05D002196 6.1e-12 74.3 56 69.6
Migut.E00110 Erythranthe guttata HOM05D001741 ORTHO05D002196 1.4e-11 73.2 56 66.1
COL.COLO4_23038 Corchorus olitorius HOM05D001741 ORTHO05D002196 3.0e-11 72.0 56 66.1
Nn3g17147 Nelumbo nucifera HOM05D001741 ORTHO05D002196 3.0e-11 72.0 57 63.2
Cc11_g13370 Coffea canephora HOM05D001741 ORTHO05D002196 4.0e-11 71.6 56 66.1
CSS0002275 Camellia sinensis var. sinensis HOM05D001741 ORTHO05D002196 5.2e-11 71.2 56 66.1
Cpa.g.sc183.19 Carica papaya HOM05D001741 ORTHO05D002196 5.2e-11 71.2 56 64.3
ECA246G1643 Erigeron canadensis HOM05D001741 ORTHO05D002196 5.2e-11 71.2 57 63.2
TPR.G13768 Trifolium pratense HOM05D001741 ORTHO05D002196 5.2e-11 71.2 57 66.7
ClCG05G024530 Citrullus lanatus HOM05D001741 ORTHO05D002196 6.8e-11 70.9 56 66.1
DCAR_027392 Daucus carota HOM05D001741 ORTHO05D002196 6.8e-11 70.9 56 66.1
Gohir.A13G071600 Gossypium hirsutum HOM05D001741 ORTHO05D002196 6.8e-11 70.9 56 64.3
Peaxi162Scf00026g02513 Petunia axillaris HOM05D001741 ORTHO05D002196 6.8e-11 70.9 56 66.1
Thecc.02G353700 Theobroma cacao HOM05D001741 ORTHO05D002196 6.8e-11 70.9 56 66.1
HanXRQChr17g0544801 Helianthus annuus HOM05D001741 ORTHO05D002196 8.8e-11 70.5 57 61.4
DCAR_031047 Daucus carota HOM05D001741 ORTHO05D002196 1.2e-10 70.1 56 62.5
MD16G1077600 Malus domestica HOM05D001741 ORTHO05D002196 1.2e-10 70.1 56 62.5
TWI75G0813 Tripterygium wilfordii HOM05D001741 ORTHO05D002196 1.2e-10 70.1 56 64.3
Gohir.D13G071900 Gossypium hirsutum HOM05D001741 ORTHO05D002196 1.5e-10 69.7 56 62.5
Gorai.013G082400 Gossypium raimondii HOM05D001741 ORTHO05D002196 1.5e-10 69.7 56 62.5
Actinidia31187 Actinidia chinensis HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 62.5
Aqoxy3G03306 Aquilegia oxysepala HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 62.5
AT1G69800 Arabidopsis thaliana HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 62.5
MSTRG.2356 Avicennia marina HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 64.3
CAN.G38.23 Capsicum annuum HOM05D001741 ORTHO05D002196 2.0e-10 69.3 57 63.2
FvH4_4g31760 Fragaria vesca HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 66.1
FAN12G1673 Fragaria x ananassa HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 66.1
FAN17G1528 Fragaria x ananassa HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 66.1
Nn4g23072 Nelumbo nucifera HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 64.3
RcHm_v2.0_Chr4g0440361 Rosa chinensis HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 64.3
TAR371G0100 Trochodendron aralioides HOM05D001741 ORTHO05D002196 2.0e-10 69.3 56 62.5
ATR1120G113 Amborella trichopoda HOM05D001741 ORTHO05D002196 2.6e-10 68.9 56 62.5
Ciclev10033729m.g Citrus clementina HOM05D001741 ORTHO05D002196 2.6e-10 68.9 56 62.5
MD13G1077700 Malus domestica HOM05D001741 ORTHO05D002196 2.6e-10 68.9 56 62.5
Solyc01g010700.3 Solanum lycopersicum HOM05D001741 ORTHO05D002196 2.6e-10 68.9 57 63.2
Sopen01g006320 Solanum pennellii HOM05D001741 ORTHO05D002196 2.6e-10 68.9 57 63.2
PGSC0003DMG400000861 Solanum tuberosum HOM05D001741 ORTHO05D002196 2.6e-10 68.9 57 63.2
VMungo1215G1576 Vigna mungo HOM05D001741 ORTHO05D002196 2.6e-10 68.9 59 59.3
CiPaw.05G138800 Carya illinoinensis HOM05D001741 ORTHO05D002196 3.4e-10 68.6 56 60.7
Dinv34211 Davidia involucrata HOM05D001741 ORTHO05D000654 3.4e-10 68.6 56 64.3
Rhsim12G0130600 Rhododendron simsii HOM05D001741 ORTHO05D002196 3.4e-10 68.6 56 62.5
AL2G29070 Arabidopsis lyrata HOM05D001741 ORTHO05D002196 4.4e-10 68.2 56 62.5
CsaV3_5G032420 Cucumis sativus L. HOM05D001741 ORTHO05D002196 4.4e-10 68.2 56 64.3
Duzib251G0381 Durio zibethinus HOM05D001741 ORTHO05D002196 4.4e-10 68.2 56 62.5
Lsat_1_v5_gn_3_51321 Lactuca sativa HOM05D001741 ORTHO05D002196 4.4e-10 68.2 57 57.9
Manes.01G189100 Manihot esculenta HOM05D001741 ORTHO05D002196 4.4e-10 68.2 56 58.9
Prupe.1G269400 Prunus persica HOM05D001741 ORTHO05D002196 4.4e-10 68.2 56 62.5
PGR119G0661 Punica granatum HOM05D001741 ORTHO05D002196 4.4e-10 68.2 56 62.5
QL03p065432 Quercus lobata HOM05D001741 ORTHO05D002196 4.4e-10 68.2 56 64.3
CSS0017018 Camellia sinensis var. sinensis HOM05D001741 ORTHO05D002196 5.7e-10 67.8 53 66.0
Carub.0002s1650 Capsella rubella HOM05D001741 ORTHO05D002196 5.7e-10 67.8 56 62.5
Glyma.02G020200 Glycine max HOM05D001741 ORTHO05D002196 5.7e-10 67.8 56 64.3
vmacro16332 Vaccinium macrocarpon HOM05D001741 ORTHO05D002196 5.7e-10 67.8 56 62.5
Nitab4.5_0000141g0350 Nicotiana tabacum HOM05D001741 ORTHO05D002196 7.5e-10 67.4 57 59.6
Nitab4.5_0002752g0140 Nicotiana tabacum HOM05D001741 ORTHO05D002196 7.5e-10 67.4 57 59.6
Sed0010202 Sechium edule HOM05D001741 ORTHO05D002196 9.8e-10 67.0 56 62.5
THA.LOC104822927 Tarenaya hassleriana HOM05D001741 ORTHO05D002196 9.8e-10 67.0 56 64.3
CSS0014423 Camellia sinensis var. sinensis HOM05D001741 ORTHO05D002196 1.3e-09 66.6 56 62.5
PSO832G3125 Papaver somniferum HOM05D001741 ORTHO05D002196 1.3e-09 66.6 56 60.7
Atru.chr11.1894 Acer truncatum HOM05D001741 ORTHO05D002196 1.7e-09 66.2 56 60.7
BcaB05g24489 Brassica carinata HOM05D001741 ORTHO05D002196 1.7e-09 66.2 58 60.3
A02p16170 Brassica napus HOM05D001741 ORTHO05D002196 1.7e-09 66.2 58 60.3
C02p26950 Brassica napus HOM05D001741 ORTHO05D002196 1.7e-09 66.2 58 60.3
DCAR_007137 Daucus carota HOM05D001741 ORTHO05D002196 1.7e-09 66.2 56 60.7
MBI01_g12908_MAGBIO Magnolia biondii HOM05D001741 ORTHO05D002196 1.7e-09 66.2 56 60.7
MSTRG.13404 Avicennia marina HOM05D001741 ORTHO05D002196 2.2e-09 65.9 57 57.9
MELO3C012073.2 Cucumis melo HOM05D001741 ORTHO05D002196 2.2e-09 65.9 56 62.5
arahy.Tifrunner.gnm1.ann1.78AWB5 Arachis hypogaea HOM05D001741 ORTHO05D002196 2.8e-09 65.5 56 64.3
Cfa009018 Carpinus fangiana HOM05D001741 ORTHO05D002196 2.8e-09 65.5 56 60.7
Haze_12052 Corylus avellana HOM05D001741 ORTHO05D002196 2.8e-09 65.5 56 60.7
FAN22G2407 Fragaria x ananassa HOM05D001741 ORTHO05D002196 2.8e-09 65.5 56 62.5
Lj2g0016570 Lotus japonicus HOM05D001741 ORTHO05D002196 2.8e-09 65.5 56 62.5
unitig_8.g3949 Utricularia gibba HOM05D001741 ORTHO05D002196 2.8e-09 65.5 56 66.1
Glyma.01G043400 Glycine max HOM05D001741 ORTHO05D002196 3.7e-09 65.1 56 62.5
Lj3A1041T82 Lonicera japonica HOM05D001741 ORTHO05D002196 3.7e-09 65.1 56 57.1
Atru.chr11.1908 Acer truncatum HOM05D001741 ORTHO05D002196 4.9e-09 64.7 56 58.9
BcaC03g15132 Brassica carinata HOM05D001741 ORTHO05D002196 4.9e-09 64.7 58 60.3
BolC2t08757H Brassica oleracea HOM05D001741 ORTHO05D002196 4.9e-09 64.7 58 60.3
Lalb_Chr04g0256291 Lupinus albus HOM05D001741 ORTHO05D002196 4.9e-09 64.7 56 62.5
Lalb_Chr17g0340421 Lupinus albus HOM05D001741 ORTHO05D002196 4.9e-09 64.7 56 62.5
Zm00001eb160610 Zea mays HOM05D001741 ORTHO05D002196 4.9e-09 64.7 56 57.1
arahy.Tifrunner.gnm1.ann1.075A5E Arachis hypogaea HOM05D001741 ORTHO05D002196 6.3e-09 64.3 56 62.5
BraA02t06676Z Brassica rapa HOM05D001741 ORTHO05D002196 8.3e-09 63.9 58 58.6
CDE04G0971 Ceratophyllum demersum HOM05D001741 ORTHO05D002196 8.3e-09 63.9 56 57.1
Duzib248G0957 Durio zibethinus HOM05D001741 ORTHO05D002196 8.3e-09 63.9 56 60.7
Thhalv10018543m.g Eutrema salsugineum HOM05D001741 ORTHO05D002196 8.3e-09 63.9 56 60.7
Sp5g24920 Schrenkiella parvula HOM05D001741 ORTHO05D002196 8.3e-09 63.9 56 62.5
Aa31LG4G11010 Aethionema arabicum HOM05D001741 ORTHO05D002196 1.1e-08 63.5 56 58.9
Ca_04749_v3 Cicer arietinum L. HOM05D001741 ORTHO05D002196 1.1e-08 63.5 56 62.5
Medtr5g038570 Medicago truncatula HOM05D001741 ORTHO05D002196 1.1e-08 63.5 56 62.5
CARHR062870 Cardamine hirsuta HOM05D001741 ORTHO05D002196 1.4e-08 63.2 56 58.9
CDE06G0312 Ceratophyllum demersum HOM05D001741 ORTHO05D002196 1.4e-08 63.2 56 55.4
SMO367G0709 Selaginella moellendorffii HOM05D001741 ORTHO05D002196 1.4e-08 63.2 57 52.6
GSVIVG01020059001 Vitis vinifera HOM05D001741 ORTHO05D002196 1.4e-08 63.2 56 58.9
MD13G1077800 Malus domestica HOM05D001741 ORTHO05D002196 1.8e-08 62.8 56 58.9
Mapoly0009s0230 Marchantia polymorpha HOM05D001741 ORTHO05D002196 1.8e-08 62.8 56 53.6
Psat2g120160 Pisum sativum HOM05D001741 ORTHO05D002196 1.8e-08 62.8 64 56.2
Sabra17G0045600 Salix brachista HOM05D001741 ORTHO05D002196 1.8e-08 62.8 56 57.1
Eucgr.G02534 Eucalyptus grandis HOM05D001741 ORTHO05D002196 3.1e-08 62.0 56 57.1
Phvul.002G089600 Phaseolus vulgaris HOM05D001741 ORTHO05D002196 3.1e-08 62.0 56 58.9
Psat2g132640 Pisum sativum HOM05D001741 ORTHO05D002196 4.1e-08 61.6 64 54.7
BcaB03g14759 Brassica carinata HOM05D001741 ORTHO05D002196 5.4e-08 61.2 56 58.9
BcaC08g46427 Brassica carinata HOM05D001741 ORTHO05D002196 5.4e-08 61.2 56 58.9
A07p36250 Brassica napus HOM05D001741 ORTHO05D002196 5.4e-08 61.2 56 58.9
C06p43610 Brassica napus HOM05D001741 ORTHO05D002196 5.4e-08 61.2 56 58.9
BolC6t39433H Brassica oleracea HOM05D001741 ORTHO05D002196 5.4e-08 61.2 56 58.9
BraA07t31197Z Brassica rapa HOM05D001741 ORTHO05D002196 5.4e-08 61.2 56 58.9
Psat1g002200 Pisum sativum HOM05D001741 ORTHO05D002196 5.4e-08 61.2 53 62.3
SEGI_38493 Sequoiadendron giganteum HOM05D001741 ORTHO05D002196 5.4e-08 61.2 56 51.8
Potri.017G053600 Populus trichocarpa HOM05D001741 ORTHO05D002196 7.0e-08 60.8 56 55.4
HPP92_007637 Vanilla planifolia HOM05D001741 ORTHO05D002196 1.2e-07 60.1 56 53.6
Psat4g058440 Pisum sativum HOM05D001741 ORTHO05D002196 2.7e-07 58.9 57 57.9
FvH4_4g31780 Fragaria vesca HOM05D001741 ORTHO05D002196 4.5e-07 58.2 55 54.5
FAN07G0115 Fragaria x ananassa HOM05D001741 ORTHO05D002196 4.5e-07 58.2 55 54.5
FAN07G0918 Fragaria x ananassa HOM05D001741 ORTHO05D002196 4.5e-07 58.2 55 54.5
FAN12G0099 Fragaria x ananassa HOM05D001741 ORTHO05D002196 4.5e-07 58.2 55 54.5
RcHm_v2.0_Chr4g0440371 Rosa chinensis HOM05D001741 ORTHO05D002196 1.0e-06 57.0 56 53.6
AUR62005737 Chenopodium quinoa HOM05D001741 ORTHO05D002196 2.9e-06 55.5 57 50.9
Peaxi162Scf00536g00118 Petunia axillaris HOM05D001741 ORTHO05D002196 2.9e-06 55.5 62 45.2
AUR62028824 Chenopodium quinoa HOM05D001741 ORTHO05D002196 3.8e-06 55.1 57 49.1
EL10Ac6g13161 Beta vulgaris HOM05D001741 ORTHO05D002196 5.0e-06 54.7 57 49.1
Atru.chr9.1110 Acer truncatum HOM05D001741 ORTHO05D002196 8.6e-06 53.9 62 45.2


User provided reference genes

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