Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 0.0e+00 1706.0 881 100.0
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 6.4e-155 552.4 1007 40.5
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.6e-132 477.2 700 45.7
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 6.1e-129 466.1 810 41.0
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 9.7e-127 458.8 767 42.6
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 1.4e-125 454.9 761 42.6
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 2.0e-124 451.1 887 39.8
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 3.4e-124 450.3 743 44.1
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 1.0e-123 448.7 1038 36.3
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 1.4e-122 444.9 902 40.0
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 4.2e-122 443.4 747 42.8
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 9.4e-122 442.2 863 39.7
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 3.6e-121 440.3 803 41.2
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 6.1e-121 439.5 970 36.1
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 7.9e-121 439.1 775 40.5
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 1.0e-120 438.7 964 37.2
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 1.4e-120 438.3 902 38.2
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 1.4e-120 438.3 761 41.7
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 2.3e-120 437.6 747 41.4
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 5.7e-119 433.0 1009 36.6
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 5.7e-119 433.0 760 41.7
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 9.7e-119 432.2 696 44.5
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 2.4e-117 427.6 1008 37.5
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 5.3e-117 426.4 749 41.8
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 2.6e-116 424.1 1000 38.0
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 7.7e-116 422.5 748 41.0
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 1.7e-115 421.4 1039 35.0
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 2.9e-115 420.6 969 35.7
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 3.8e-115 420.2 727 41.3
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 1.9e-114 417.9 731 41.6
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 2.5e-114 417.5 958 36.3
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 9.4e-114 415.6 785 40.5
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 6.7e-112 409.5 786 38.8
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 8.8e-112 409.1 779 39.9
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 1.1e-111 408.7 769 38.5
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 1.5e-111 408.3 782 38.2
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 2.6e-111 407.5 754 40.3
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 1.3e-110 405.2 862 37.4
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.7e-110 404.8 751 41.1
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 2.8e-110 404.1 754 40.7
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.8e-110 403.3 731 39.5
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 1.4e-109 401.7 802 38.5
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 2.9e-107 394.0 826 37.3
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 6.5e-107 392.9 864 35.9
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 6.5e-107 392.9 774 39.4
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 1.5e-106 391.7 756 40.2
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 2.5e-106 391.0 743 38.6
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 3.2e-106 390.6 990 35.2
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 9.4e-106 389.0 773 37.5
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 1.2e-105 388.7 774 40.8
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.6e-105 388.3 801 36.5
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 3.6e-105 387.1 929 34.4
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 8.0e-105 386.0 928 35.3
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 1.4e-104 385.2 734 38.3
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 1.8e-104 384.8 986 34.2
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 3.0e-104 384.0 951 34.2
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 6.8e-104 382.9 953 34.3
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.5e-103 381.7 642 41.4
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.5e-103 381.7 932 34.3
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 3.7e-102 377.1 997 33.4
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 3.5e-100 370.5 879 35.3
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 4.5e-100 370.2 913 34.7
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 5.9e-100 369.8 943 34.3
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 5.9e-100 369.8 900 34.6
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 1.0e-99 369.0 955 34.5
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 1.3e-99 368.6 815 37.1
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 6.5e-99 366.3 1008 33.6
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.7e-97 360.9 674 40.4
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 2.3e-96 357.8 717 37.9
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 3.4e-95 354.0 797 36.8
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 5.7e-95 353.2 980 32.7
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 7.5e-95 352.8 859 34.8
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 1.7e-94 351.7 793 37.1
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 2.2e-94 351.3 803 35.6
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 4.9e-94 350.1 517 44.9
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 5.4e-93 346.7 971 33.9
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 5.4e-93 346.7 956 33.4
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 2.0e-92 344.7 874 34.2
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 2.0e-92 344.7 874 34.2
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 1.3e-91 342.0 1050 31.8
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 2.3e-91 341.3 875 33.7
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 2.3e-91 341.3 875 33.7
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 5.0e-91 340.1 973 33.6
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 5.6e-90 336.7 950 32.7
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 2.1e-89 334.7 772 36.1
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 2.8e-89 334.3 803 35.2
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 1.4e-88 332.0 879 35.5
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 2.6e-87 327.8 677 38.1
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 2.9e-86 324.3 917 33.5
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 2.4e-85 321.2 951 31.0
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 2.4e-85 321.2 953 31.3
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 5.4e-85 320.1 736 34.6
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 2.5e-82 311.2 1013 31.3
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 4.7e-81 307.0 640 36.6
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 3.4e-79 300.8 773 33.2
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 2.5e-74 284.6 553 39.8
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 3.6e-73 280.8 811 32.4
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 9.2e-69 266.2 774 32.8
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 1.5e-66 258.8 726 32.8
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 8.1e-65 253.1 833 30.3
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 1.3e-62 245.7 560 35.9
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 7.8e-60 236.5 560 36.8
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 3.3e-58 231.1 594 34.5
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 2.5e-50 204.9 243 47.7
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.8e-49 201.4 243 47.7
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 8.1e-49 199.9 396 36.9
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.1e-48 199.5 360 43.1
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 5.4e-45 187.2 207 53.6
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 2.1e-44 185.3 240 48.3
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 6.0e-44 183.7 296 42.2
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.3e-43 181.8 326 43.3
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 1.1e-40 172.9 175 60.0
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 7.1e-37 160.2 211 47.9
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 6.9e-32 143.7 188 48.4
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 9.0e-32 143.3 274 38.0
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 1.3e-27 129.4 204 44.1
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 4.6e-20 104.4 108 52.8
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.3e-19 102.1 138 47.1
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 2.6e-15 88.6 67 59.7
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 3.8e-14 84.7 52 80.8
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 3.8e-14 84.7 213 31.5
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 1.4e-13 82.8 88 46.6
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 5.1e-11 74.3 144 34.0
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 2.0e-10 72.4 69 47.8
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 2.6e-10 72.0 260 29.6
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 9.7e-10 70.1 126 34.9
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 1.3e-09 69.7 221 29.0
Actinidia22990 Actinidia chinensis HOM05D002848 ORTHO05D003043 2.8e-09 68.6 95 42.1
Gorai.010G005700 Gossypium raimondii HOM05D002848 ORTHO05D003043 2.8e-09 68.6 142 35.9
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 6.3e-09 67.4 70 48.6
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.8e-08 65.9 258 27.5
Gohir.D06G001300 Gossypium hirsutum HOM05D002848 ORTHO05D003043 9.1e-08 63.5 142 34.5
Actinidia02760 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.9e-07 60.8 94 40.4
Phvul.002G110100 Phaseolus vulgaris HOM05D002848 ORTHO05D003043 7.7e-07 60.5 104 35.6
ECA233G1527 Erigeron canadensis HOM05D002848 ORTHO05D003043 1.7e-06 59.3 236 28.8
BraA08t34900Z Brassica rapa HOM05D002848 ORTHO05D003043 2.2e-06 58.9 314 29.0
Ca_19632_v3 Cicer arietinum L. HOM05D002848 ORTHO05D003043 2.2e-06 58.9 235 28.5
MD02G1134000 Malus domestica HOM05D002848 ORTHO05D003043 2.2e-06 58.9 116 36.2
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 2.9e-06 58.5 283 26.9
CiPaw.08G132900 Carya illinoinensis HOM05D002848 ORTHO05D003043 5.0e-06 57.8 131 33.6
Solyc09g074700.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 5.0e-06 57.8 60 56.7
Gohir.D02G097800 Gossypium hirsutum HOM05D002848 ORTHO05D003043 6.5e-06 57.4 233 30.9
Gorai.005G111400 Gossypium raimondii HOM05D002848 ORTHO05D003043 6.5e-06 57.4 233 30.9
BcaC07g39005 Brassica carinata HOM05D002848 ORTHO05D003043 8.5e-06 57.0 315 29.2
C08p19770 Brassica napus HOM05D002848 ORTHO05D003043 8.5e-06 57.0 315 29.2
BolC8t49614H Brassica oleracea HOM05D002848 ORTHO05D003043 8.5e-06 57.0 315 29.2
CARHR020360 Cardamine hirsuta HOM05D002848 ORTHO05D003043 8.5e-06 57.0 223 30.5


User provided reference genes

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