Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 0.0e+00 1300.8 653 100.0
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 4.7e-126 456.1 1006 33.0
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 9.4e-119 431.8 999 32.8
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 1.2e-105 388.3 1013 29.9
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 3.6e-102 376.7 907 30.8
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 1.0e-96 358.6 907 30.2
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 1.0e-96 358.6 1001 27.9
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 1.3e-96 358.2 1008 28.0
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 1.1e-95 355.1 984 29.1
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 1.2e-94 351.7 997 28.3
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 2.1e-94 350.9 940 29.1
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 2.8e-94 350.5 1005 28.2
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 4.7e-94 349.7 998 28.2
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 1.0e-93 348.6 1015 28.5
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 4.0e-93 346.7 962 30.0
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.7e-91 341.3 868 29.4
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 6.3e-91 339.3 1014 26.7
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 1.8e-90 337.8 936 29.3
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 2.0e-89 334.3 1013 27.7
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 2.0e-89 334.3 771 30.0
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 2.0e-89 334.3 1023 26.7
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 3.5e-89 333.6 1002 27.3
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 1.1e-87 328.6 947 28.2
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 3.3e-87 327.0 765 31.0
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 1.2e-86 325.1 954 27.5
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 6.1e-86 322.8 839 29.4
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 8.0e-86 322.4 971 27.5
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 1.2e-84 318.5 1011 27.9
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 1.3e-83 315.1 800 28.8
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 1.7e-83 314.7 948 27.4
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 1.4e-82 311.6 1008 26.1
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 5.4e-82 309.7 944 26.8
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 3.5e-81 307.0 1004 25.3
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 4.6e-81 306.6 1024 25.7
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 3.9e-80 303.5 1013 26.9
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 6.6e-80 302.8 930 27.2
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 6.6e-80 302.8 1009 25.8
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 5.6e-79 299.7 925 26.8
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 9.5e-79 298.9 999 25.1
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 9.5e-79 298.9 1007 25.7
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 1.6e-78 298.1 1005 25.8
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 2.8e-78 297.4 934 27.0
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.1e-77 295.4 937 26.4
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 1.4e-77 295.0 991 25.1
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.8e-77 294.7 937 26.1
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 3.1e-77 293.9 1014 25.9
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 2.6e-76 290.8 937 26.0
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 3.4e-76 290.4 1011 26.0
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 5.8e-76 289.7 934 26.2
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 2.9e-75 287.3 934 25.8
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 2.9e-75 287.3 1018 25.9
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 2.4e-74 284.3 964 26.5
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 5.4e-74 283.1 1008 24.9
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 5.4e-74 283.1 991 25.1
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.6e-73 281.6 964 26.0
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 3.5e-73 280.4 916 25.3
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 7.8e-73 279.3 922 25.4
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 2.3e-72 277.7 924 26.4
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 6.6e-72 276.2 916 25.3
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 1.9e-71 274.6 1002 25.1
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 7.3e-71 272.7 1005 25.6
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 9.5e-71 272.3 954 26.1
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 1.6e-70 271.6 844 27.5
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 2.3e-69 267.7 1008 24.8
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 5.2e-69 266.5 1021 23.9
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 2.9e-67 260.8 978 23.6
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 4.6e-65 253.4 926 24.6
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 1.0e-64 252.3 927 25.5
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 1.9e-63 248.1 973 24.8
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 1.2e-60 238.8 882 26.6
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 1.4e-58 231.9 837 24.7
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 3.5e-57 227.3 915 24.2
PGSC0003DMG401011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 3.9e-56 223.8 367 36.2
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 8.1e-54 216.1 375 34.9
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 3.4e-52 210.7 194 51.0
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 7.6e-52 209.5 945 22.4
Nn7g37820 Nelumbo nucifera HOM05D005971 ORTHO05D007459 2.4e-50 204.5 393 32.6
Cpa.g.sc10.38 Carica papaya HOM05D005971 ORTHO05D007459 9.3e-50 202.6 208 46.6
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 1.6e-49 201.8 194 46.4
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 1.7e-48 198.4 194 48.5
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.9e-47 194.9 194 46.9
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 2.5e-47 194.5 194 46.9
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 5.6e-47 193.4 366 33.9
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 7.3e-47 193.0 301 38.9
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 3.6e-46 190.7 198 46.5
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 4.8e-46 190.3 194 45.9
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 3.4e-44 184.1 194 43.8
Nn7g37821 Nelumbo nucifera HOM05D005971 ORTHO05D007459 3.2e-42 177.6 194 43.8
Cpa.g.sc10.37 Carica papaya HOM05D005971 ORTHO05D007459 5.5e-42 176.8 386 32.6
Hund12466 Selenicereus undatus HOM05D005971 ORTHO05D007459 1.8e-40 171.8 381 27.8
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 8.7e-40 169.5 372 32.8
FAN25G3291 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.1e-37 162.5 305 34.1
Gohir.A13G153099 Gossypium hirsutum HOM05D005971 ORTHO05D007459 2.4e-37 161.4 371 32.3
Peaxi162Scf00095g00013 Petunia axillaris HOM05D005971 ORTHO05D007459 2.4e-37 161.4 212 40.6
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 2.0e-36 158.3 147 51.7
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 4.2e-34 150.6 212 36.8
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 6.0e-33 146.7 194 35.6
Atru.chr12.2180 Acer truncatum HOM05D005971 ORTHO05D007459 5.1e-32 143.7 241 35.3
VMungo1080G1570 Vigna mungo HOM05D005971 ORTHO05D007459 4.3e-31 140.6 139 46.0
CARHR003730 Cardamine hirsuta HOM05D005971 ORTHO05D007459 2.4e-29 134.8 242 35.5
CDE12G0091 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 4.1e-29 134.0 284 31.7
arahy.Tifrunner.gnm1.ann1.Q40ZT9 Arachis hypogaea HOM05D005971 ORTHO05D007459 1.5e-28 132.1 148 41.2
Os06g0674800 Oryza sativa ssp. japonica HOM05D005971 ORTHO05D007459 2.6e-28 131.3 326 29.1
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 1.3e-27 129.0 194 37.6
Gohir.D13G157600 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.0e-24 119.4 179 37.4
Zm00001eb273960 Zea mays HOM05D005971 ORTHO05D007459 3.9e-24 117.5 323 27.2
GSVIVG01020426001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.4e-21 109.0 178 36.5
C03p00610 Brassica napus HOM05D005971 ORTHO05D040551 5.9e-20 103.6 153 36.6
Glyma.13G358366 Glycine max HOM05D005971 ORTHO05D007459 7.2e-18 96.7 146 37.7
Mapoly0060s0028 Marchantia polymorpha HOM05D005971 ORTHO05D007459 1.2e-17 95.9 168 32.1
Pp3c6_21780 Physcomitrium patens HOM05D005971 ORTHO05D007459 2.1e-17 95.1 174 32.8
Glyma.13G098800 Glycine max HOM05D005971 ORTHO05D007459 2.7e-17 94.7 146 37.0
BolC3t12626H Brassica oleracea HOM05D005971 ORTHO05D040551 1.3e-11 75.9 153 30.7
Glyma.08G171633 Glycine max HOM05D005971 ORTHO05D007459 1.7e-11 75.5 74 45.9
CDE12G0613 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 2.2e-11 75.1 83 39.8
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 1.1e-10 72.8 87 48.3


User provided reference genes

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