Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 7.5e-118 427.2 211 100.0
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 7.0e-100 367.5 210 82.9
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 1.3e-98 363.2 204 84.8
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 6.6e-98 360.9 204 82.4
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 2.5e-97 359.0 206 83.0
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 2.8e-96 355.5 204 79.4
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 1.4e-95 353.2 204 81.4
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 1.8e-95 352.8 205 81.0
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 4.0e-95 351.7 203 81.8
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 5.2e-95 351.3 204 81.9
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 6.8e-95 350.9 201 81.6
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 8.9e-95 350.5 204 80.9
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 8.9e-95 350.5 204 81.4
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 8.9e-95 350.5 204 79.9
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 1.2e-94 350.1 203 80.8
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 1.5e-94 349.7 204 81.4
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 2.0e-94 349.4 204 80.9
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 2.6e-94 349.0 204 80.9
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 3.4e-94 348.6 202 81.2
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 4.4e-94 348.2 207 78.3
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 4.4e-94 348.2 203 80.3
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 7.5e-94 347.4 203 81.3
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 7.5e-94 347.4 203 81.3
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 7.5e-94 347.4 203 80.8
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 7.5e-94 347.4 213 80.3
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 9.8e-94 347.1 202 80.7
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 9.8e-94 347.1 207 77.8
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 1.3e-93 346.7 203 80.8
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 1.7e-93 346.3 203 79.8
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.7e-93 346.3 203 80.8
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 3.7e-93 345.1 204 78.4
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 4.9e-93 344.7 219 77.2
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 8.3e-93 344.0 204 77.9
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 8.3e-93 344.0 205 79.0
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 8.3e-93 344.0 203 79.3
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 8.3e-93 344.0 203 79.3
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 8.3e-93 344.0 204 79.9
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 1.1e-92 343.6 204 78.9
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 1.1e-92 343.6 204 81.9
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 1.1e-92 343.6 202 79.7
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 1.4e-92 343.2 204 78.4
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 1.9e-92 342.8 203 77.3
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 1.9e-92 342.8 211 76.3
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 1.9e-92 342.8 203 79.3
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 1.9e-92 342.8 203 79.3
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.4e-92 342.4 204 77.5
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.4e-92 342.4 204 77.5
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 2.4e-92 342.4 203 78.8
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 3.2e-92 342.0 203 78.3
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 4.1e-92 341.7 204 77.9
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 4.1e-92 341.7 204 77.9
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 4.1e-92 341.7 204 77.9
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 4.1e-92 341.7 204 77.9
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 5.4e-92 341.3 204 77.9
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 5.4e-92 341.3 204 77.9
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 5.4e-92 341.3 203 78.8
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 9.2e-92 340.5 203 80.3
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 1.6e-91 339.7 202 79.7
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 1.6e-91 339.7 203 79.3
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 2.1e-91 339.3 204 77.0
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 3.5e-91 338.6 203 79.8
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 4.6e-91 338.2 203 78.3
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 6.0e-91 337.8 208 76.9
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 6.0e-91 337.8 203 77.8
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 7.8e-91 337.4 209 76.1
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 1.3e-90 336.7 204 76.0
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 1.3e-90 336.7 203 76.4
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 1.7e-90 336.3 203 77.3
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 1.7e-90 336.3 203 77.3
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 3.0e-90 335.5 204 78.4
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 3.0e-90 335.5 203 77.8
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 5.1e-90 334.7 204 75.5
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 1.9e-89 332.8 205 76.1
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 7.3e-89 330.9 210 77.1
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 1.6e-88 329.7 202 76.2
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 4.7e-88 328.2 208 76.0
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 6.2e-88 327.8 203 77.3
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 1.7e-85 319.7 216 72.7
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 3.5e-83 312.0 213 70.0
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 3.0e-82 308.9 203 72.9
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 3.9e-82 308.5 211 72.0
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 5.6e-81 304.7 204 70.6
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 7.3e-81 304.3 180 79.4
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 7.3e-81 304.3 204 71.6
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 2.1e-80 302.8 171 83.6
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 2.8e-80 302.4 208 66.8
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 4.7e-80 301.6 170 84.1
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 5.2e-79 298.1 171 83.0
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 1.2e-78 297.0 195 70.8
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 2.2e-77 292.7 193 72.0
CiPaw.16G046800 Carya illinoinensis HOM05D004348 ORTHO05D006191 2.4e-76 289.3 179 74.9
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 7.8e-75 284.3 207 64.3
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 1.1e-73 280.4 227 62.6
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 1.2e-70 270.4 165 77.6
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 7.6e-70 267.7 203 66.0
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 1.4e-68 263.5 203 61.1
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 2.1e-67 259.6 208 65.9
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 2.7e-67 259.2 170 74.1
HPP92_028299 Vanilla planifolia HOM05D004348 ORTHO05D006191 6.0e-67 258.1 162 72.8
MD08G1105800 Malus domestica HOM05D004348 ORTHO05D006191 3.9e-66 255.4 156 75.6
SHI08298 Sapria himalayana HOM05D004348 ORTHO05D006191 9.6e-65 250.8 151 78.1
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 6.2e-56 221.5 134 76.9
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 6.9e-55 218.0 173 64.7
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 3.4e-54 215.7 128 76.6
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 2.9e-53 212.6 129 78.3
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 5.5e-44 181.8 104 80.8
MSTRG.22274 Avicennia marina HOM05D004348 ORTHO05D006191 1.2e-43 180.6 109 78.9
HPP92_019296 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.2e-43 180.6 112 74.1
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 1.8e-42 176.8 104 78.8
TPR.G40548 Trifolium pratense HOM05D004348 ORTHO05D006191 1.8e-42 176.8 100 81.0
Haze_18739 Corylus avellana HOM05D004348 ORTHO05D006191 2.3e-42 176.4 175 52.0
PRCOL_00001182 Prasinoderma coloniale HOM05D004348 ORTHO05D006191 3.7e-32 142.5 237 38.0
Cre16.g686501 Chlamydomonas reinhardtii HOM05D004348 ORTHO05D006191 1.5e-25 120.6 203 37.9
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 4.4e-25 119.0 82 64.6
Lsat_1_v5_gn_5_11760 Lactuca sativa HOM05D004348 ORTHO05D006191 4.8e-24 115.5 72 79.2
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 1.6e-14 84.0 54 77.8
Mapoly1060s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.2e-13 80.1 219 30.1
Mapoly0200s0002 Marchantia polymorpha HOM05D004348 ORTHO05D000239 8.5e-13 78.2 198 29.3
Mapoly0049s0015 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.5e-12 76.6 224 28.1
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.2e-12 76.3 194 27.3
Mapoly0893s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.2e-12 76.3 215 29.8
SGA_v2.0_scaffold6G03459 Striga asiatica HOM05D004348 ORTHO05D006191 3.2e-12 76.3 46 71.7
Mapoly2546s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.1e-11 73.6 198 27.3
Mapoly0031s0035 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.7e-11 73.2 190 27.4
Mapoly0064s0093 Marchantia polymorpha HOM05D004348 ORTHO05D000239 6.8e-10 68.6 192 29.2
Mapoly0107s0021 Marchantia polymorpha HOM05D004348 ORTHO05D000239 8.8e-10 68.2 214 28.0
Mapoly0120s0019 Marchantia polymorpha HOM05D004348 ORTHO05D000239 8.8e-10 68.2 214 27.1
Mapoly0637s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.5e-09 67.4 203 27.1
Mapoly0062s0120 Marchantia polymorpha HOM05D004348 ORTHO05D000239 2.0e-09 67.0 207 26.6
Mapoly0007s0015 Marchantia polymorpha HOM05D000005 ORTHO05D000239 9.8e-09 64.7 217 27.6
Mapoly0067s0038 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.3e-08 64.3 200 29.5
Lsat_1_v5_gn_9_17240 Lactuca sativa HOM05D004348 ORTHO05D006191 2.2e-08 63.5 64 53.1
SGA_v2.0_scaffold162G37946 Striga asiatica HOM05D004348 ORTHO05D006191 2.2e-08 63.5 38 73.7
Mapoly0080s0029 Marchantia polymorpha HOM05D011080 ORTHO05D000239 4.8e-08 62.4 198 26.3
Mapoly0067s0036 Marchantia polymorpha HOM05D011080 ORTHO05D000239 6.3e-08 62.0 225 27.6
Mapoly0062s0059 Marchantia polymorpha HOM05D000005 ORTHO05D000239 1.8e-07 60.5 176 28.4
Mapoly0041s0095 Marchantia polymorpha HOM05D011080 ORTHO05D000239 3.1e-07 59.7 188 29.8


User provided reference genes

Program Settings