Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 0.0e+00 1782.7 934 100.0
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 9.2e-293 1010.4 949 59.6
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 1.4e-288 996.5 945 59.6
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 3.0e-283 978.8 884 60.4
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 5.2e-272 941.4 947 57.2
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 3.4e-271 938.7 942 56.9
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 4.7e-265 918.3 932 56.3
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 2.0e-263 912.9 957 55.8
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 9.9e-263 910.6 957 55.9
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 2.2e-262 909.4 888 56.5
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 2.2e-262 909.4 933 55.9
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 6.4e-262 907.9 908 55.8
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 4.1e-261 905.2 942 55.6
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 7.1e-261 904.4 922 56.3
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 1.8e-256 889.8 927 54.2
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 3.1e-256 889.0 939 54.0
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 8.4e-254 880.9 947 53.1
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 2.7e-252 875.9 899 54.6
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 1.0e-251 874.0 933 53.5
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 1.7e-251 873.2 954 52.9
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 1.3e-249 867.1 941 52.3
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 3.1e-248 862.4 844 56.6
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 1.5e-247 860.1 908 53.9
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 2.0e-247 859.8 905 53.9
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 2.6e-247 859.4 946 52.7
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 5.8e-247 858.2 943 52.0
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 1.9e-245 853.2 947 52.5
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 4.6e-244 848.6 930 52.5
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 3.9e-243 845.5 961 52.7
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 8.7e-243 844.3 924 52.4
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 2.5e-242 842.8 896 55.4
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 3.3e-242 842.4 954 52.7
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 5.6e-242 841.6 969 51.1
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 1.6e-241 840.1 924 52.4
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 5.8e-239 831.6 870 54.5
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 2.2e-238 829.7 880 52.5
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 2.2e-238 829.7 912 53.1
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 1.9e-237 826.6 946 51.5
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 1.9e-237 826.6 879 53.0
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 2.4e-237 826.2 927 51.3
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 1.2e-236 823.9 972 50.8
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 2.7e-236 822.8 968 52.2
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 3.5e-236 822.4 955 51.3
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 1.0e-235 820.8 950 50.5
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 1.8e-235 820.1 932 53.4
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 5.1e-235 818.5 934 51.3
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 3.3e-234 815.8 918 51.6
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 5.6e-234 815.1 905 51.6
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 7.4e-234 814.7 956 51.9
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.6e-233 813.5 955 51.7
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 4.8e-233 812.0 956 51.0
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 8.2e-233 811.2 930 51.4
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 1.4e-232 810.4 930 51.3
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 4.0e-232 808.9 937 49.8
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 9.0e-232 807.7 931 50.6
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 2.6e-231 806.2 931 50.7
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 4.5e-231 805.4 941 49.7
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 7.6e-231 804.7 810 54.0
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 8.4e-230 801.2 959 49.3
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 2.7e-228 796.2 919 50.2
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 3.9e-227 792.3 909 49.4
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 3.9e-227 792.3 909 49.4
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 1.1e-224 784.3 864 51.6
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 1.4e-224 783.9 902 51.9
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 3.1e-224 782.7 868 51.7
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 1.5e-223 780.4 948 50.1
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 2.6e-223 779.6 896 51.8
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 1.1e-221 774.2 894 50.2
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 5.5e-221 771.9 886 49.0
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 5.5e-221 771.9 846 52.5
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 4.6e-220 768.8 931 50.2
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 1.5e-218 763.8 872 51.8
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 1.9e-218 763.5 922 49.7
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 1.9e-218 763.5 911 50.3
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 3.7e-217 759.2 891 50.5
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 2.4e-216 756.5 757 55.4
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 1.5e-215 753.8 851 49.9
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 4.2e-213 745.7 838 51.3
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 5.5e-213 745.3 824 52.7
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 1.3e-209 734.2 944 48.4
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 6.3e-209 731.9 934 46.0
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 6.9e-208 728.4 665 59.4
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 2.6e-207 726.5 659 60.7
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 2.2e-206 723.4 936 47.4
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 1.4e-205 720.7 822 51.2
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 8.0e-204 714.9 905 47.7
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 1.3e-201 707.6 892 47.6
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 7.2e-197 691.8 653 56.7
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 9.4e-197 691.4 878 46.6
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 4.7e-196 689.1 904 44.9
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 4.0e-195 686.0 914 45.8
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.6e-188 664.1 660 56.4
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 1.4e-187 661.0 659 54.9
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 8.8e-187 658.3 653 54.1
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 7.5e-186 655.2 655 53.4
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 1.3e-185 654.4 649 54.9
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 2.0e-183 647.1 665 53.1
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 3.5e-183 646.4 670 53.3
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 3.8e-182 642.9 653 52.4
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 1.5e-149 534.6 669 48.4
Potri.002G128201 Populus trichocarpa HOM05D004348 ORTHO05D006191 2.2e-137 494.2 471 55.0
SEGI_03031 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 1.6e-124 451.4 601 45.1
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 7.1e-120 436.0 955 36.2
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 1.1e-104 385.6 854 33.3
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 9.7e-101 372.5 828 33.6
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.1e-99 369.0 906 32.6
MSTRG.22273 Avicennia marina HOM05D004348 ORTHO05D006191 1.2e-95 355.5 310 61.6
Lsat_1_v5_gn_1_21400 Lactuca sativa HOM05D004348 ORTHO05D006191 1.5e-93 348.6 341 56.0
Lsat_1_v5_gn_1_42721 Lactuca sativa HOM05D004348 ORTHO05D006191 1.5e-93 348.6 341 56.0
Lsat_1_v5_gn_9_17721 Lactuca sativa HOM05D004348 ORTHO05D006191 1.5e-93 348.6 341 56.0
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 1.2e-79 302.4 883 29.6
Lsat_1_v5_gn_3_76560 Lactuca sativa HOM05D004348 ORTHO05D006191 3.5e-66 257.7 242 58.7
Lsat_1_v5_gn_4_501 Lactuca sativa HOM05D004348 ORTHO05D006191 3.5e-66 257.7 242 58.7
Lsat_1_v5_gn_2_12981 Lactuca sativa HOM05D004348 ORTHO05D006191 3.0e-62 244.6 265 53.6
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 3.3e-56 224.6 212 54.2
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 5.4e-51 207.2 268 46.3
Lsat_1_v5_gn_9_98160 Lactuca sativa HOM05D004348 ORTHO05D005602 1.5e-48 199.1 209 56.0
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 4.4e-45 187.6 211 53.6
Aa31LG2G16170 Aethionema arabicum HOM05D004348 ORTHO05D006191 5.2e-38 164.1 251 45.8
SEGI_30856 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 4.4e-37 161.0 259 39.8
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 6.9e-22 110.5 971 20.7
SEGI_03645 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 1.2e-21 109.8 161 40.4
Atru.chr1.1667 Acer truncatum HOM05D004348 ORTHO05D006191 9.9e-21 106.7 123 53.7
Lsat_1_v5_gn_9_67901 Lactuca sativa HOM05D004348 ORTHO05D006191 4.9e-20 104.4 98 60.2
CAN.G371.43 Capsicum annuum HOM05D004348 ORTHO05D006191 2.1e-18 99.0 165 43.6
Mapoly0017s0011 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.5e-16 92.8 247 33.6
GSVIVG01009550001 Vitis vinifera HOM05D004348 ORTHO05D006191 5.6e-16 90.9 55 81.8
Sp7g06010 Schrenkiella parvula HOM05D004348 ORTHO05D006191 2.1e-10 72.4 74 52.7
Psat0s4914g0040 Pisum sativum HOM05D001376 ORTHO05D003384 2.4e-06 58.9 45 68.9


User provided reference genes

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