Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 3.9e-64 248.1 131 100.0
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 5.3e-29 131.3 112 60.7
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 7.6e-28 127.5 142 49.3
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 9.9e-28 127.1 126 53.2
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 1.0e-24 117.1 108 54.6
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 1.3e-22 110.2 143 47.6
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.3e-22 110.2 141 46.1
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.3e-22 110.2 133 48.9
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 2.1e-22 109.4 136 46.3
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 2.8e-22 109.0 134 50.0
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 8.1e-22 107.5 129 45.7
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.4e-21 106.7 144 47.2
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 1.4e-21 106.7 123 47.2
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 1.8e-21 106.3 146 43.8
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 1.8e-21 106.3 120 48.3
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 4.0e-21 105.1 146 43.8
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 6.9e-21 104.4 146 43.8
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 9.0e-21 104.0 144 44.4
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.2e-20 103.6 146 43.8
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.5e-20 103.2 137 48.2
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 2.6e-20 102.4 118 44.9
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.6e-20 102.4 140 42.9
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 3.4e-20 102.1 119 44.5
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 4.5e-20 101.7 144 43.8
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 4.5e-20 101.7 115 47.0
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 5.8e-20 101.3 145 44.8
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.0e-19 100.5 141 43.3
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.3e-19 100.1 135 43.7
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 1.7e-19 99.8 97 56.7
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 2.9e-19 99.0 145 41.4
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 2.9e-19 99.0 137 44.5
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 8.4e-19 97.4 144 39.6
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 8.4e-19 97.4 139 43.2
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.4e-18 96.7 117 45.3
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.4e-18 96.7 145 40.7
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 1.9e-18 96.3 118 46.6
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 2.5e-18 95.9 142 44.4
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.5e-18 95.9 133 42.9
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.5e-18 95.9 133 42.9
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 2.5e-18 95.9 122 45.9
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 3.2e-18 95.5 145 40.0
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 5.5e-18 94.7 120 44.2
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 5.5e-18 94.7 142 44.4
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 5.5e-18 94.7 141 44.7
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 7.1e-18 94.4 144 45.1
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.1e-18 94.4 144 45.1
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.1e-18 94.4 144 45.1
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 7.1e-18 94.4 122 44.3
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 7.1e-18 94.4 145 40.7
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 9.3e-18 94.0 141 39.7
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 9.3e-18 94.0 144 46.5
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.2e-17 93.6 105 45.7
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 2.1e-17 92.8 140 40.7
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 2.7e-17 92.4 137 41.6
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 2.7e-17 92.4 117 46.2
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 2.7e-17 92.4 131 44.3
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 3.5e-17 92.0 141 41.1
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 4.6e-17 91.7 141 41.8
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 4.6e-17 91.7 145 40.7
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 4.6e-17 91.7 129 43.4
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 4.6e-17 91.7 143 39.2
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 6.0e-17 91.3 129 41.1
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 7.9e-17 90.9 144 39.6
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 2.3e-16 89.4 135 37.8
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.0e-16 89.0 121 46.3
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 3.0e-16 89.0 130 44.6
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 3.9e-16 88.6 133 37.6
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 3.9e-16 88.6 98 42.9
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 8.7e-16 87.4 149 37.6
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.9e-15 86.3 137 43.8
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.9e-15 86.3 141 41.8
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 2.5e-15 85.9 133 40.6
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.5e-15 85.9 141 41.1
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 2.5e-15 85.9 99 45.5
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 5.7e-15 84.7 141 39.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 7.4e-15 84.3 136 36.0
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 7.4e-15 84.3 125 38.4
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 9.6e-15 84.0 141 39.0
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 9.6e-15 84.0 141 39.0
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 9.6e-15 84.0 96 49.0
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.3e-14 83.6 138 37.7
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 1.3e-14 83.6 141 38.3
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.6e-14 83.2 136 35.3
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 2.8e-14 82.4 151 37.1
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.8e-14 82.4 151 37.1
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 4.8e-14 81.6 121 42.1
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 6.3e-14 81.3 119 42.9
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 8.2e-14 80.9 146 37.0
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.4e-13 80.1 131 38.2
SalBow1G0981 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.4e-13 80.1 83 51.8
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 2.4e-13 79.3 138 37.0
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 9.0e-13 77.4 109 43.1
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.2e-12 77.0 147 34.7
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.2e-12 77.0 147 34.7
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 1.5e-12 76.6 104 40.4
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.5e-12 76.6 137 36.5
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 2.0e-12 76.3 102 42.2
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 5.9e-12 74.7 135 35.6
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 2.9e-11 72.4 101 41.6
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 2.9e-11 72.4 118 39.0
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.4e-10 70.1 82 46.3
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 4.2e-10 68.6 82 46.3
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 7.2e-10 67.8 76 50.0
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 6.7e-08 61.2 89 38.2
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 2.2e-06 56.2 111 32.4
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 4.8e-06 55.1 131 30.5


User provided reference genes

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