Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10043 Utricularia gibba HOM05D004843 ORTHO05D005833 6.5e-76 287.3 149 100.0
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 7.3e-19 97.8 151 40.4
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 1.6e-18 96.7 185 38.4
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 6.9e-17 91.3 151 40.4
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 3.8e-15 85.5 166 34.9
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 4.9e-15 85.1 150 38.7
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 4.2e-14 82.0 119 44.5
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 2.1e-13 79.7 110 46.4
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 3.5e-13 79.0 84 48.8
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 1.3e-12 77.0 84 47.6
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 2.3e-12 76.3 88 48.9
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 1.9e-11 73.2 149 34.9
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 7.4e-11 71.2 100 43.0
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 1.3e-10 70.5 81 48.1
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 8.1e-10 67.8 147 33.3
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 1.4e-09 67.0 87 44.8
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.8e-09 66.6 175 30.3
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 3.1e-09 65.9 78 48.7
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 3.1e-09 65.9 122 39.3
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 4.0e-09 65.5 78 44.9
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 6.9e-09 64.7 181 30.9
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.2e-08 63.9 148 32.4
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 1.2e-08 63.9 127 37.8
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 9.9e-08 60.8 79 44.3
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 9.9e-08 60.8 140 31.4
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 9.9e-08 60.8 146 30.1
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 2.9e-07 59.3 89 40.4
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 3.8e-07 58.9 83 41.0
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 4.9e-07 58.5 96 41.7
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 6.4e-07 58.2 82 41.5
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 6.4e-07 58.2 82 41.5
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 6.4e-07 58.2 81 42.0
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 1.1e-06 57.4 99 34.3
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 1.1e-06 57.4 87 40.2
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.4e-06 57.0 80 40.0
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 1.4e-06 57.0 120 35.0
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 1.4e-06 57.0 91 38.5
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.9e-06 56.6 98 40.8
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 2.4e-06 56.2 99 33.3
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 2.4e-06 56.2 94 36.2
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 3.2e-06 55.8 109 34.9
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 3.2e-06 55.8 103 40.8
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 5.5e-06 55.1 71 45.1
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 5.5e-06 55.1 76 42.1
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 9.3e-06 54.3 100 34.0


User provided reference genes

Program Settings