Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 2.7e-109 398.7 203 100.0
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 2.3e-79 299.3 203 73.4
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 2.3e-79 299.3 203 73.4
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 8.6e-79 297.4 203 72.9
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 3.3e-78 295.4 203 72.9
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 3.3e-78 295.4 202 71.8
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.2e-75 287.0 201 73.6
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 1.5e-75 286.6 203 71.4
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 1.5e-75 286.6 202 70.8
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 2.0e-75 286.2 203 70.0
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 2.6e-75 285.8 203 71.4
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 4.4e-75 285.0 201 73.1
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 5.8e-75 284.6 203 71.4
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 9.8e-75 283.9 201 69.7
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.3e-74 283.5 201 70.1
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 1.7e-74 283.1 201 71.6
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 1.7e-74 283.1 202 70.8
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 3.7e-74 282.0 201 71.6
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 3.7e-74 282.0 201 69.2
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.1e-73 280.4 200 71.0
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 1.1e-73 280.4 198 71.2
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 1.1e-73 280.4 203 69.0
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 2.4e-73 279.3 200 70.5
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 4.1e-73 278.5 198 70.7
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 1.2e-72 276.9 201 70.6
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 1.6e-72 276.6 198 70.2
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 1.6e-72 276.6 203 67.5
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 1.6e-72 276.6 201 69.7
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 2.1e-72 276.2 203 70.0
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 2.1e-72 276.2 200 70.0
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 2.7e-72 275.8 203 67.5
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 2.7e-72 275.8 203 70.4
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 3.5e-72 275.4 200 70.0
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 3.5e-72 275.4 198 70.2
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 4.6e-72 275.0 203 69.0
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 1.0e-71 273.9 199 71.4
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 1.0e-71 273.9 203 70.4
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 1.0e-71 273.9 198 69.2
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.3e-71 273.5 200 69.5
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.3e-71 273.5 203 67.0
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.7e-71 273.1 200 69.5
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.7e-71 273.1 200 68.0
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 1.7e-71 273.1 201 68.7
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 1.7e-71 273.1 201 68.7
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 2.3e-71 272.7 198 69.7
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 2.3e-71 272.7 202 67.8
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 3.0e-71 272.3 199 68.8
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 3.9e-71 271.9 200 69.0
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 3.9e-71 271.9 203 69.0
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 3.9e-71 271.9 199 67.3
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 5.1e-71 271.6 200 66.0
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 5.1e-71 271.6 200 69.0
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 6.6e-71 271.2 188 71.8
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 8.6e-71 270.8 193 69.4
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 8.6e-71 270.8 213 66.7
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.9e-70 269.6 201 69.7
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 1.9e-70 269.6 193 68.9
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 2.5e-70 269.2 198 68.2
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 3.3e-70 268.9 198 69.7
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 4.3e-70 268.5 202 65.3
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 4.3e-70 268.5 199 68.8
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 5.6e-70 268.1 202 65.3
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 5.6e-70 268.1 202 65.3
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 2.8e-69 265.8 202 64.9
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 3.6e-69 265.4 201 67.2
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 4.7e-69 265.0 202 64.9
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 8.1e-69 264.2 196 65.3
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 8.1e-69 264.2 203 66.0
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 8.1e-69 264.2 203 64.0
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 1.4e-68 263.5 204 68.1
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 1.8e-68 263.1 193 66.8
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 1.8e-68 263.1 198 68.7
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 5.2e-68 261.5 203 63.1
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 6.8e-68 261.2 201 67.7
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.2e-67 260.4 195 66.2
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 1.2e-67 260.4 203 62.1
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 1.2e-67 260.4 203 62.1
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 1.5e-67 260.0 203 63.1
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 1.5e-67 260.0 203 63.1
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 1.5e-67 260.0 195 65.1
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 1.5e-67 260.0 198 64.6
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 2.0e-67 259.6 195 65.6
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 2.0e-67 259.6 203 62.1
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.0e-67 259.6 200 66.5
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 2.0e-67 259.6 200 66.5
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 2.0e-67 259.6 201 65.7
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 3.4e-67 258.8 200 66.0
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 5.8e-67 258.1 195 64.6
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.7e-66 256.5 181 70.7
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 2.2e-66 256.1 193 65.8
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 6.4e-66 254.6 206 60.7
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 1.1e-65 253.8 199 64.3
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 2.4e-65 252.7 198 65.2
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 3.2e-65 252.3 178 70.8
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 3.2e-65 252.3 196 64.8
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 4.1e-65 251.9 198 64.1
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 5.4e-65 251.5 182 70.3
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 1.0e-63 247.3 203 62.1
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 1.0e-63 247.3 200 64.0
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 1.3e-63 246.9 203 64.0
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 1.5e-62 243.4 200 61.5
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 9.6e-62 240.7 175 71.4
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 3.6e-61 238.8 179 65.4
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 3.6e-61 238.8 198 61.6
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 4.7e-61 238.4 205 63.4
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 6.2e-61 238.0 205 60.5
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 1.1e-60 237.3 200 60.5
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 3.1e-60 235.7 200 62.0
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 6.8e-60 234.6 176 67.6
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 1.5e-59 233.4 193 58.5
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 8.4e-58 227.6 181 64.6
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 8.4e-58 227.6 184 62.0
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 1.1e-57 227.3 199 60.8
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 1.1e-57 227.3 329 43.8
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 1.9e-57 226.5 198 58.1
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 1.2e-56 223.8 240 54.2
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 4.6e-56 221.9 168 70.2
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 5.1e-55 218.4 251 50.2
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.4e-52 210.3 222 51.4
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 9.0e-52 207.6 235 52.8
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 2.0e-51 206.5 191 53.9
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 2.1e-48 196.4 222 50.0
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 7.9e-48 194.5 188 52.7
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 1.0e-47 194.1 167 62.3
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 6.2e-45 184.9 225 48.0
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 1.1e-41 174.1 128 69.5
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 1.4e-41 173.7 197 49.7
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 2.7e-40 169.5 120 70.0
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 7.9e-40 167.9 200 47.5
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.8e-39 166.8 116 74.1
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 2.1e-37 159.8 184 46.7
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 8.1e-37 157.9 112 70.5
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 1.3e-34 150.6 112 66.1
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 2.9e-34 149.4 165 50.9
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 2.3e-31 139.8 112 61.6
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 3.1e-28 129.4 204 37.3
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 5.3e-28 128.6 103 63.1
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 4.5e-27 125.6 195 41.0
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 2.2e-26 123.2 87 70.1
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 5.0e-26 122.1 85 69.4
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 8.4e-26 121.3 94 61.7
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 2.5e-25 119.8 85 71.8
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.2e-25 119.4 83 71.1
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.2e-24 117.5 84 67.9
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.1e-24 116.7 129 53.5
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 1.4e-20 104.0 130 43.8
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 4.1e-20 102.4 100 54.0
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 9.0e-20 101.3 74 68.9
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.2e-18 96.7 67 71.6
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.9e-18 96.3 72 62.5
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 6.5e-18 95.1 67 70.1
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 1.9e-17 93.6 74 60.8
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 7.2e-17 91.7 70 62.9
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 6.1e-16 88.6 195 32.8
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 1.4e-15 87.4 75 60.0
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 3.9e-15 85.9 193 33.2
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 4.8e-13 79.0 117 42.7
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 1.8e-12 77.0 102 45.1
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 3.2e-09 66.2 49 63.3
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 3.6e-08 62.8 45 64.4
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 1.0e-07 61.2 45 68.9
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 1.1e-06 57.8 48 56.2
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 9.7e-06 54.7 42 61.9
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 9.7e-06 54.7 70 41.4


User provided reference genes

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