Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 2.2e-191 672.2 342 100.0
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 5.5e-110 401.7 349 63.6
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 8.4e-103 377.9 319 63.6
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 6.3e-98 361.7 331 58.9
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 1.4e-97 360.5 290 64.5
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 3.1e-97 359.4 288 63.9
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 5.3e-97 358.6 291 63.6
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 1.5e-96 357.1 283 65.4
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 2.0e-96 356.7 291 64.9
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 2.6e-96 356.3 283 65.7
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 2.6e-96 356.3 283 65.7
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 5.9e-96 355.1 317 60.3
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 5.9e-96 355.1 283 65.7
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 5.9e-96 355.1 283 65.7
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 7.6e-96 354.8 307 61.2
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 2.9e-95 352.8 290 62.8
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 8.5e-95 351.3 290 63.8
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.9e-94 350.1 307 62.2
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 2.5e-94 349.7 291 63.9
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 2.5e-94 349.7 306 62.1
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 3.2e-94 349.4 290 63.8
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 4.2e-94 349.0 291 63.6
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 5.5e-94 348.6 290 63.8
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 9.3e-94 347.8 290 63.1
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.6e-93 347.1 285 63.5
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.7e-93 346.3 313 60.4
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 3.6e-93 345.9 287 63.4
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 7.9e-93 344.7 290 62.1
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 1.0e-92 344.4 285 64.9
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 1.4e-92 344.0 288 64.6
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 2.3e-92 343.2 308 59.7
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 2.3e-92 343.2 293 63.1
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 3.0e-92 342.8 286 62.6
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 3.0e-92 342.8 290 62.8
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 8.8e-92 341.3 290 62.1
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 8.8e-92 341.3 319 57.1
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 8.8e-92 341.3 316 58.9
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.1e-91 340.9 286 62.2
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.1e-91 340.9 290 62.4
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 1.5e-91 340.5 284 63.0
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 1.9e-91 340.1 287 62.7
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 2.5e-91 339.7 290 61.4
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 3.3e-91 339.3 321 57.9
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 3.3e-91 339.3 324 56.8
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 4.3e-91 339.0 290 61.7
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 7.4e-91 338.2 311 60.5
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 7.4e-91 338.2 290 61.4
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 7.4e-91 338.2 346 54.9
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 7.4e-91 338.2 290 62.1
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 9.7e-91 337.8 285 63.5
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.7e-90 337.0 346 54.3
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.7e-90 337.0 346 54.3
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.7e-90 337.0 268 65.3
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 2.8e-90 336.3 291 61.9
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 2.8e-90 336.3 289 61.9
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 4.8e-90 335.5 290 62.1
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 4.8e-90 335.5 348 55.2
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 8.2e-90 334.7 289 61.2
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 8.2e-90 334.7 306 58.2
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 1.1e-89 334.3 346 54.3
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.4e-89 334.0 287 62.0
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.4e-89 334.0 283 62.9
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 6.9e-89 331.6 346 54.6
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 6.9e-89 331.6 293 61.1
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 1.2e-88 330.9 347 55.0
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 1.2e-88 330.9 347 55.0
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.2e-88 330.9 290 59.7
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 1.5e-88 330.5 316 57.3
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.0e-88 330.1 298 60.4
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 2.6e-88 329.7 346 54.0
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 2.6e-88 329.7 270 63.0
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 3.4e-88 329.3 347 54.8
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 7.7e-88 328.2 298 60.4
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.3e-87 327.4 321 56.7
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 2.2e-87 326.6 293 59.4
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 5.0e-87 325.5 348 53.7
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.0e-87 325.5 290 59.3
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.6e-85 320.5 287 60.3
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.1e-85 320.1 292 57.2
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.4e-84 317.4 298 58.1
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 7.4e-83 311.6 288 58.0
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 9.7e-83 311.2 313 55.3
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 2.2e-82 310.1 330 53.6
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 6.9e-81 305.1 323 53.6
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.5e-80 303.9 313 54.6
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 5.5e-78 295.4 287 57.1
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 4.7e-77 292.4 290 54.8
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.4e-76 290.8 283 58.7
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 2.3e-76 290.0 267 57.3
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 6.7e-76 288.5 234 65.8
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 8.8e-76 288.1 298 55.0
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 6.3e-74 282.0 254 59.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.1e-73 281.2 248 62.1
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 9.1e-73 278.1 234 65.0
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 2.0e-72 276.9 270 54.8
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.8e-68 263.8 230 63.0
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 3.0e-68 263.1 293 54.6
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 2.4e-65 253.4 302 47.0
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 1.3e-63 247.7 272 47.8
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 8.5e-63 245.0 255 54.5
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 7.2e-62 241.9 230 57.0
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 3.7e-58 229.6 241 56.4
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 1.8e-52 210.7 236 48.7
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.0e-51 207.2 291 44.0
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 4.4e-51 206.1 276 42.8
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 5.4e-49 199.1 214 56.1
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.7e-47 194.1 170 62.4
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 3.8e-47 193.0 158 64.6
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 8.6e-47 191.8 158 64.6
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.1e-46 191.4 156 68.6
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.9e-41 174.1 158 57.0
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 3.9e-39 166.4 154 53.9
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 6.4e-34 149.1 279 34.4
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 1.4e-33 147.9 289 36.3
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.0e-31 141.7 163 52.1
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 8.1e-13 79.0 63 55.6
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 1.5e-11 74.7 61 62.3
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 2.7e-08 63.9 37 73.0
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 3.9e-07 60.1 59 52.5


User provided reference genes

Program Settings