Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6856 Utricularia gibba HOM05D002914 ORTHO05D003196 9.3e-39 163.3 97 100.0
unitig_699.g19875 Utricularia gibba HOM05D002914 ORTHO05D003196 7.4e-12 73.9 98 44.9
Solyc01g108330.2 Solanum lycopersicum HOM05D002914 ORTHO05D003196 1.3e-08 63.2 79 46.8
Sopen01g050550 Solanum pennellii HOM05D002914 ORTHO05D003196 1.3e-08 63.2 79 46.8
Rhsim05G0080600 Rhododendron simsii HOM05D002914 ORTHO05D003196 3.8e-08 61.6 64 43.8
Nitab4.5_0000876g0190 Nicotiana tabacum HOM05D002914 ORTHO05D003196 6.5e-08 60.8 82 40.2
PGSC0003DMG400025804 Solanum tuberosum HOM05D002914 ORTHO05D003196 6.5e-08 60.8 79 44.3
Nitab4.5_0002462g0040 Nicotiana tabacum HOM05D002914 ORTHO05D003196 1.1e-07 60.1 60 51.7
Nitab4.5_0002673g0030 Nicotiana tabacum HOM05D002914 ORTHO05D003196 1.4e-07 59.7 95 37.9
Peaxi162Scf00016g00161 Petunia axillaris HOM05D002914 ORTHO05D003196 2.5e-07 58.9 60 51.7
CDE02G0277 Ceratophyllum demersum HOM05D002914 ORTHO05D003196 3.2e-07 58.5 76 42.1
Nitab4.5_0000876g0210 Nicotiana tabacum HOM05D002914 ORTHO05D003196 3.2e-07 58.5 82 39.0
Lalb_Chr16g0384551 Lupinus albus HOM05D002914 ORTHO05D003196 4.2e-07 58.2 105 32.4
ClCG08G015580 Citrullus lanatus HOM05D002914 ORTHO05D003196 5.5e-07 57.8 80 47.5
Lj1g0002449 Lotus japonicus HOM05D002914 ORTHO05D003196 5.5e-07 57.8 55 47.3
Glyma.04G036500 Glycine max HOM05D002914 ORTHO05D003196 7.2e-07 57.4 72 41.7
Sed0019897 Sechium edule HOM05D002914 ORTHO05D003196 7.2e-07 57.4 91 38.5
Medtr4g086780 Medicago truncatula HOM05D002914 ORTHO05D003196 9.3e-07 57.0 75 37.3
Oeu003693.1 Olea europaea HOM05D002914 ORTHO05D003196 9.3e-07 57.0 52 48.1
Oeu010582.1 Olea europaea HOM05D002914 ORTHO05D003196 9.3e-07 57.0 52 48.1
arahy.Tifrunner.gnm1.ann1.HH3ECB Arachis hypogaea HOM05D002914 ORTHO05D003196 1.2e-06 56.6 74 40.5
Glyma.06G036600 Glycine max HOM05D002914 ORTHO05D003196 1.2e-06 56.6 70 41.4
Ca_15973_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 1.6e-06 56.2 77 37.7
DCAR_022064 Daucus carota HOM05D002914 ORTHO05D003196 1.6e-06 56.2 57 43.9
Duzib052G1256 Durio zibethinus HOM05D002914 ORTHO05D003196 1.6e-06 56.2 95 34.7
Lalb_Chr09g0328151 Lupinus albus HOM05D002914 ORTHO05D003196 1.6e-06 56.2 71 47.9
HPP92_003444 Vanilla planifolia HOM05D002914 ORTHO05D003196 2.1e-06 55.8 76 38.2
Eucgr.I01175 Eucalyptus grandis HOM05D002914 ORTHO05D003196 2.7e-06 55.5 93 48.4
Nn5g30169 Nelumbo nucifera HOM05D002914 ORTHO05D003196 2.7e-06 55.5 44 54.5
Psat7g121600 Pisum sativum HOM05D002914 ORTHO05D003196 2.7e-06 55.5 35 54.3
Potri.014G035400 Populus trichocarpa HOM05D002914 ORTHO05D003196 2.7e-06 55.5 91 38.5
CDE01G0545 Ceratophyllum demersum HOM05D000767 ORTHO05D003196 3.6e-06 55.1 77 37.7
VMungo0251G3532 Vigna mungo HOM05D002914 ORTHO05D003196 3.6e-06 55.1 59 57.6
CSS0043526 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 4.6e-06 54.7 77 40.3
TAR628G0868 Trochodendron aralioides HOM05D002914 ORTHO05D003196 4.6e-06 54.7 79 51.9
MELO3C010895.2 Cucumis melo HOM05D002914 ORTHO05D003196 6.1e-06 54.3 95 43.2
CsaV3_2G028190 Cucumis sativus L. HOM05D002914 ORTHO05D003196 6.1e-06 54.3 96 43.8
Lalb_Chr23g0266911 Lupinus albus HOM05D002914 ORTHO05D003196 6.1e-06 54.3 54 44.4
Cpa.g.sc62.45 Carica papaya HOM05D002914 ORTHO05D003196 7.9e-06 53.9 45 53.3
Ca_18662_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 7.9e-06 53.9 37 51.4
Glyma.07G210000 Glycine max HOM05D002914 ORTHO05D003196 7.9e-06 53.9 78 47.4
Medtr3g101240 Medicago truncatula HOM05D002914 ORTHO05D003196 7.9e-06 53.9 36 58.3
Psat5g044840 Pisum sativum HOM05D002914 ORTHO05D003196 7.9e-06 53.9 36 58.3


User provided reference genes

Program Settings