Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 2.4e-190 668.7 340 100.0
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 4.6e-93 345.5 377 52.3
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 2.5e-91 339.7 379 51.5
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 9.6e-91 337.8 379 50.9
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 7.6e-88 328.2 380 48.7
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 6.5e-87 325.1 380 48.2
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 4.2e-86 322.4 381 48.6
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 1.2e-85 320.9 381 49.6
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 2.7e-85 319.7 380 48.9
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 2.3e-84 316.6 376 47.6
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 5.1e-84 315.5 371 49.6
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 1.5e-83 313.9 381 46.2
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 1.5e-83 313.9 375 49.1
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 1.9e-83 313.5 380 48.9
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 3.3e-83 312.8 375 48.5
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 5.7e-83 312.0 372 47.0
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 9.6e-83 311.2 401 45.4
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 3.7e-82 309.3 370 48.6
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 4.8e-82 308.9 374 46.0
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 1.4e-81 307.4 393 46.3
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 2.4e-81 306.6 379 48.3
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 9.0e-81 304.7 380 47.6
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 1.2e-80 304.3 378 47.1
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.5e-80 303.9 380 47.6
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 5.8e-80 302.0 381 45.9
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 5.8e-80 302.0 379 47.8
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 5.8e-80 302.0 380 47.1
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 7.6e-80 301.6 403 45.4
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 1.3e-79 300.8 380 47.9
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 1.3e-79 300.8 377 45.4
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 1.7e-79 300.4 379 47.2
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 2.2e-79 300.1 383 46.5
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 3.8e-79 299.3 377 45.9
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 5.0e-79 298.9 377 46.4
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 6.5e-79 298.5 409 45.0
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 6.5e-79 298.5 389 46.5
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 8.4e-79 298.1 388 45.6
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 8.4e-79 298.1 390 45.9
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 1.4e-78 297.4 392 45.2
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 2.5e-78 296.6 380 46.8
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 5.5e-78 295.4 399 44.1
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 9.3e-78 294.7 386 47.4
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 9.3e-78 294.7 378 47.1
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 1.2e-77 294.3 390 45.9
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 2.1e-77 293.5 380 45.8
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 2.7e-77 293.1 377 45.9
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 2.7e-77 293.1 378 45.0
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 2.7e-77 293.1 378 45.0
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 7.9e-77 291.6 380 45.8
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 1.3e-76 290.8 375 44.5
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 3.9e-76 289.3 375 44.0
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 8.7e-76 288.1 392 43.6
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 1.1e-75 287.7 378 44.7
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 7.4e-75 285.0 378 44.7
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 1.3e-74 284.3 358 46.6
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.3e-74 284.3 360 46.4
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 1.3e-74 284.3 379 45.1
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 2.8e-74 283.1 374 46.3
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 1.1e-73 281.2 380 44.2
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 3.1e-73 279.6 374 43.0
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 6.9e-73 278.5 380 43.7
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 2.6e-72 276.6 414 42.8
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 7.7e-72 275.0 359 46.5
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 7.7e-72 275.0 380 44.2
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 1.0e-71 274.6 418 43.1
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 2.2e-71 273.5 381 43.0
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 9.4e-70 268.1 362 42.8
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 6.1e-69 265.4 367 45.0
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 8.8e-68 261.5 368 42.7
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 2.5e-67 260.0 340 46.5
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 4.8e-66 255.8 365 41.9
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 4.8e-66 255.8 365 40.8
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 1.1e-65 254.6 365 41.9
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.4e-65 254.2 378 41.0
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 1.8e-65 253.8 384 41.9
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 3.1e-65 253.1 363 41.3
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 6.9e-65 251.9 373 41.6
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 4.5e-64 249.2 367 40.9
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 7.7e-64 248.4 367 40.6
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 1.7e-63 247.3 367 40.1
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 8.5e-63 245.0 363 40.5
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 9.4e-62 241.5 376 41.0
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 1.2e-61 241.1 367 39.5
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 2.7e-61 240.0 364 39.0
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 3.6e-61 239.6 367 39.5
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 4.7e-61 239.2 252 52.4
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 2.3e-60 236.9 379 36.9
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 3.0e-60 236.5 376 38.8
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 3.0e-60 236.5 302 46.4
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 1.1e-59 234.6 367 39.0
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 4.4e-59 232.6 380 39.2
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 7.4e-59 231.9 378 39.2
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 2.8e-58 229.9 397 39.8
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 3.1e-57 226.5 297 45.1
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 3.2e-54 216.5 338 40.5
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 3.2e-54 216.5 231 51.5
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 3.6e-53 213.0 274 45.3
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 6.1e-53 212.2 307 43.3
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 6.1e-53 212.2 342 40.6
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 2.0e-51 207.2 272 45.2
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 1.8e-49 200.7 241 46.1
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 6.8e-44 182.2 252 42.1
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 2.0e-43 180.6 373 34.6
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 2.8e-42 176.8 347 36.3
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 4.8e-42 176.0 378 34.4
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 2.4e-41 173.7 188 51.6
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 1.2e-40 171.4 350 34.6
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 2.9e-39 166.8 394 31.0
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 5.4e-33 146.0 225 39.6
CARHR039340 Cardamine hirsuta HOM05D005911 ORTHO05D007565 3.8e-31 139.8 183 44.8
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 6.1e-29 132.5 295 33.2
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.2e-27 128.3 284 33.8
A05p20720 Brassica napus HOM05D005911 ORTHO05D007565 2.9e-26 123.6 160 45.6
BraA05t20979Z Brassica rapa HOM05D005911 ORTHO05D007565 2.9e-26 123.6 160 45.6
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 1.1e-25 121.7 324 28.7
Ciclev10013569m.g Citrus clementina HOM05D005911 ORTHO05D007565 8.0e-21 105.5 72 68.1
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 5.8e-19 99.4 360 27.8
TAR371G0586 Trochodendron aralioides HOM05D005911 ORTHO05D007565 5.8e-19 99.4 158 41.1
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 2.7e-16 90.5 343 26.2
Nitab4.5_0000776g0050 Nicotiana tabacum HOM05D005911 ORTHO05D007565 6.0e-16 89.4 88 48.9
CARHR039370 Cardamine hirsuta HOM05D005911 ORTHO05D007565 1.0e-15 88.6 106 44.3
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.3e-15 88.2 136 41.2
Ciclev10003801m.g Citrus clementina HOM05D005911 ORTHO05D007565 3.0e-15 87.0 59 67.8
Lj9A367G53 Lonicera japonica HOM05D005911 ORTHO05D007565 5.0e-15 86.3 61 65.6
Gorai.008G153200 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.9e-14 84.3 133 39.8
Ciclev10018182m.g Citrus clementina HOM05D005911 ORTHO05D007565 2.1e-13 80.9 55 67.3
Sc14g0001900 Simmondsia chinensis HOM05D005911 ORTHO05D007565 2.0e-11 74.3 62 58.1
Cre17.g701100 Chlamydomonas reinhardtii HOM05D005911 ORTHO05D007565 8.3e-10 68.9 193 29.5
Gohir.D04G144225 Gossypium hirsutum HOM05D005911 ORTHO05D007565 2.4e-09 67.4 55 61.8
Gorai.012G129900 Gossypium raimondii HOM05D005911 ORTHO05D007565 2.4e-09 67.4 55 61.8
TAR371G0927 Trochodendron aralioides HOM05D005911 ORTHO05D007565 2.1e-08 64.3 80 46.2
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 7.3e-06 55.8 51 51.0


User provided reference genes

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