Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 3.2e-78 295.0 153 100.0
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 1.5e-30 136.7 158 58.9
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 1.6e-29 133.3 150 56.0
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 1.6e-29 133.3 150 56.0
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 1.6e-29 133.3 157 56.7
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 8.0e-29 131.0 161 52.8
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 1.0e-28 130.6 152 55.9
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 3.1e-28 129.0 159 54.7
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 5.2e-28 128.3 159 52.8
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 8.9e-28 127.5 146 56.8
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 8.9e-28 127.5 152 56.6
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 8.9e-28 127.5 162 52.5
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 8.9e-28 127.5 161 54.7
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 1.2e-27 127.1 152 55.3
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 7.5e-27 124.4 145 56.6
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 7.5e-27 124.4 145 56.6
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 9.8e-27 124.0 152 53.3
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 9.8e-27 124.0 155 54.8
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 9.8e-27 124.0 97 72.2
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 9.8e-27 124.0 161 52.2
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 9.8e-27 124.0 161 54.0
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 1.3e-26 123.6 97 72.2
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 1.7e-26 123.2 165 53.3
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 2.2e-26 122.9 155 55.5
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 2.2e-26 122.9 161 51.6
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 2.2e-26 122.9 97 71.1
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.2e-26 122.9 97 71.1
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 2.2e-26 122.9 117 64.1
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 2.9e-26 122.5 139 57.6
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 4.9e-26 121.7 138 55.8
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 4.9e-26 121.7 162 50.6
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 6.4e-26 121.3 147 57.1
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 6.4e-26 121.3 147 57.1
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 6.4e-26 121.3 147 57.1
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 8.3e-26 120.9 168 54.8
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 8.3e-26 120.9 165 53.3
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 1.1e-25 120.6 161 54.0
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 1.1e-25 120.6 162 55.6
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 1.1e-25 120.6 142 55.6
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 1.9e-25 119.8 138 55.8
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 3.2e-25 119.0 163 54.0
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 3.2e-25 119.0 153 51.0
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 3.2e-25 119.0 158 53.8
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 4.1e-25 118.6 164 50.0
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 4.1e-25 118.6 151 53.6
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 4.1e-25 118.6 157 52.9
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 5.4e-25 118.2 141 56.0
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 7.0e-25 117.9 156 51.9
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 7.0e-25 117.9 165 50.9
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 7.0e-25 117.9 165 50.3
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.2e-24 117.1 162 50.0
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.2e-24 117.1 155 53.5
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 1.2e-24 117.1 160 53.8
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 1.2e-24 117.1 166 50.0
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.0e-24 116.3 162 50.6
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 2.0e-24 116.3 162 48.8
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 2.7e-24 115.9 141 53.9
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 4.6e-24 115.2 108 63.0
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 4.6e-24 115.2 156 54.5
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 6.0e-24 114.8 162 48.8
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 6.0e-24 114.8 135 56.3
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 6.0e-24 114.8 154 53.2
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 7.8e-24 114.4 138 56.5
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 7.8e-24 114.4 136 55.9
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 7.8e-24 114.4 105 64.8
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 7.8e-24 114.4 110 61.8
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 7.8e-24 114.4 110 61.8
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 1.0e-23 114.0 154 51.9
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.0e-23 114.0 166 49.4
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 1.3e-23 113.6 136 55.1
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 1.7e-23 113.2 168 51.2
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 2.3e-23 112.8 160 49.4
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 2.3e-23 112.8 158 53.8
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 3.0e-23 112.5 146 53.4
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 3.9e-23 112.1 138 55.8
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 5.0e-23 111.7 139 55.4
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 6.6e-23 111.3 138 52.2
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 8.6e-23 110.9 148 51.4
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 1.5e-22 110.2 168 47.6
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.5e-22 110.2 153 53.6
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.5e-22 110.2 163 49.1
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.5e-22 110.2 163 49.1
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 1.9e-22 109.8 149 49.7
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 1.9e-22 109.8 155 49.7
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 3.3e-22 109.0 139 52.5
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 5.6e-22 108.2 138 54.3
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 9.5e-22 107.5 150 51.3
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.2e-21 107.1 161 46.0
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 2.1e-21 106.3 86 69.8
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 3.6e-21 105.5 132 53.0
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 3.6e-21 105.5 162 46.9
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 6.2e-21 104.8 90 65.6
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 1.4e-20 103.6 163 47.9
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 4.0e-20 102.1 134 50.7
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 4.0e-20 102.1 139 50.4
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 5.2e-20 101.7 158 46.2
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 1.2e-19 100.5 147 53.1
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.5e-19 100.1 150 46.7
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 4.4e-19 98.6 77 70.1
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 5.8e-19 98.2 97 58.8
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 7.5e-19 97.8 153 44.4
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 1.3e-18 97.1 89 64.0
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 1.7e-18 96.7 110 56.4
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 2.9e-18 95.9 75 69.3
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 4.9e-18 95.1 135 50.4
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 4.9e-18 95.1 97 55.7
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 6.4e-18 94.7 135 49.6
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 6.4e-18 94.7 140 47.9
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 6.4e-18 94.7 74 70.3
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 8.3e-18 94.4 113 56.6
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 8.3e-18 94.4 93 62.4
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 8.3e-18 94.4 93 62.4
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 2.4e-17 92.8 93 58.1
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 3.2e-17 92.4 99 57.6
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 4.1e-17 92.0 108 57.4
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 5.4e-17 91.7 69 66.7
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 9.2e-17 90.9 107 54.2
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 7.8e-16 87.8 63 73.0
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 1.3e-15 87.0 138 46.4
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 3.6e-13 79.0 59 69.5
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.3e-12 76.3 133 45.9
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 5.2e-12 75.1 94 53.2
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 8.9e-12 74.3 94 54.3
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 9.9e-11 70.9 53 71.7
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.7e-10 70.1 105 46.7
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 4.9e-10 68.6 129 45.0
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 9.2e-09 64.3 66 57.6


User provided reference genes

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