Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6690 Utricularia gibba HOM05D004053 ORTHO05D005065 8.8e-145 516.9 259 100.0
unitig_8.g3318 Utricularia gibba HOM05D004053 ORTHO05D005065 8.7e-84 314.3 263 64.6
Oeu011173.1 Olea europaea HOM05D004053 ORTHO05D005065 1.7e-26 124.0 265 36.6
MSTRG.21579 Avicennia marina HOM05D004053 ORTHO05D005065 1.4e-25 120.9 275 35.6
SalBow6G4695 Salvia bowleyana HOM05D004053 ORTHO05D005065 3.1e-25 119.8 272 36.8
Gorai.008G005800 Gossypium raimondii HOM05D004053 ORTHO05D005065 1.8e-20 104.0 270 32.6
Gohir.D12G005800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 5.2e-20 102.4 269 31.2
Gohir.A12G006400 Gossypium hirsutum HOM05D004053 ORTHO05D005065 2.0e-19 100.5 270 32.6
Migut.D00258 Erythranthe guttata HOM05D004053 ORTHO05D005065 7.5e-19 98.6 265 34.0
Atru.chr5.1352 Acer truncatum HOM05D004053 ORTHO05D005065 1.4e-17 94.4 282 29.8
Nitab4.5_0008204g0020 Nicotiana tabacum HOM05D004053 ORTHO05D005065 1.4e-17 94.4 278 33.5
Sopen09g028800 Solanum pennellii HOM05D004053 ORTHO05D005065 1.4e-17 94.4 257 32.3
Peaxi162Scf00777g00211 Petunia axillaris HOM05D004053 ORTHO05D005065 1.8e-17 94.0 264 36.4
Nn4g26160 Nelumbo nucifera HOM05D004053 ORTHO05D005065 2.4e-17 93.6 278 30.2
PGSC0003DMG400003799 Solanum tuberosum HOM05D004053 ORTHO05D005065 2.4e-17 93.6 257 32.3
Manes.01G210500 Manihot esculenta HOM05D004053 ORTHO05D005065 5.4e-17 92.4 270 28.9
Solyc09g072990.3 Solanum lycopersicum HOM05D004053 ORTHO05D005065 5.4e-17 92.4 257 31.5
TAR362G1031 Trochodendron aralioides HOM05D004053 ORTHO05D005065 1.6e-16 90.9 278 30.6
Dinv11260 Davidia involucrata HOM05D004053 ORTHO05D005065 2.0e-16 90.5 267 31.8
SGA_v2.0_scaffold1G00444 Striga asiatica HOM05D004053 ORTHO05D005065 2.0e-16 90.5 264 31.8
GSVIVG01011074001 Vitis vinifera HOM05D004053 ORTHO05D005065 3.5e-16 89.7 275 28.7
Nitab4.5_0001323g0010 Nicotiana tabacum HOM05D004053 ORTHO05D005065 5.9e-16 89.0 286 32.2
CSS0023044 Camellia sinensis var. sinensis HOM05D004053 ORTHO05D005065 2.9e-15 86.7 270 30.7
Cc01_g19820 Coffea canephora HOM05D004053 ORTHO05D005065 3.8e-15 86.3 269 31.2
Duzib133G0805 Durio zibethinus HOM05D004053 ORTHO05D005065 3.8e-15 86.3 272 29.4
Ciclev10020315m.g Citrus clementina HOM05D004053 ORTHO05D005065 1.5e-14 84.3 270 27.4
Haze_04757 Corylus avellana HOM05D004053 ORTHO05D005065 1.9e-14 84.0 273 30.0
Lalb_Chr06g0163121 Lupinus albus HOM05D004053 ORTHO05D005065 4.2e-14 82.8 275 28.7
QL12p022856 Quercus lobata HOM05D004053 ORTHO05D005065 9.5e-14 81.6 276 26.8
Actinidia00729 Actinidia chinensis HOM05D004053 ORTHO05D005065 2.1e-13 80.5 178 34.8
Lj2A1179G44 Lonicera japonica HOM05D004053 ORTHO05D005065 2.1e-13 80.5 288 29.2
Duzib138G0912 Durio zibethinus HOM05D004053 ORTHO05D005065 1.0e-12 78.2 270 30.0
Actinidia24316 Actinidia chinensis HOM05D004053 ORTHO05D005065 1.8e-12 77.4 269 28.3
FvH4_2g24050 Fragaria vesca HOM05D004053 ORTHO05D005065 1.8e-12 77.4 267 27.7
FAN24G1933 Fragaria x ananassa HOM05D004053 ORTHO05D005065 1.8e-12 77.4 267 27.7
Cfa006097 Carpinus fangiana HOM05D004053 ORTHO05D005065 2.3e-12 77.0 275 29.1
DCAR_005821 Daucus carota HOM05D004053 ORTHO05D005065 2.3e-12 77.0 280 30.4
Phvul.001G148300 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 2.3e-12 77.0 269 29.4
Glyma.19G153300 Glycine max HOM05D004053 ORTHO05D005065 3.0e-12 76.6 272 29.8
Rhsim13G0022200 Rhododendron simsii HOM05D004053 ORTHO05D005065 4.0e-12 76.3 278 28.4
Prupe.8G245900 Prunus persica HOM05D004053 ORTHO05D005065 5.2e-12 75.9 267 29.2
FAN20G0349 Fragaria x ananassa HOM05D004053 ORTHO05D005065 6.8e-12 75.5 267 27.3
Lalb_Chr21g0306591 Lupinus albus HOM05D004053 ORTHO05D005065 6.8e-12 75.5 261 28.7
MD11G1290800 Malus domestica HOM05D004053 ORTHO05D005065 6.8e-12 75.5 267 28.1
VMungo0720G1290 Vigna mungo HOM05D004053 ORTHO05D005065 6.8e-12 75.5 272 30.5
CANSAT25G0924 Cannabis sativa HOM05D004053 ORTHO05D005065 8.9e-12 75.1 271 26.2
FAN15G3549 Fragaria x ananassa HOM05D004053 ORTHO05D005065 8.9e-12 75.1 267 27.0
Thecc.01G284500 Theobroma cacao HOM05D004053 ORTHO05D005065 1.2e-11 74.7 270 28.9
Gohir.A11G120100 Gossypium hirsutum HOM05D004053 ORTHO05D005065 1.5e-11 74.3 271 29.2
Oeu041712.1 Olea europaea HOM05D004053 ORTHO05D005065 1.5e-11 74.3 121 44.6
Gorai.007G133800 Gossypium raimondii HOM05D004053 ORTHO05D005065 2.0e-11 73.9 274 28.5
Hma1.2p1_0257F.1_g103830 Hydrangea macrophylla HOM05D004053 ORTHO05D005065 2.6e-11 73.6 283 27.9
arahy.Tifrunner.gnm1.ann1.K8THJN Arachis hypogaea HOM05D004053 ORTHO05D005065 3.4e-11 73.2 248 28.6
Carub.0006s3417 Capsella rubella HOM05D004053 ORTHO05D005065 3.4e-11 73.2 268 29.1
FAN27G0975 Fragaria x ananassa HOM05D004053 ORTHO05D005065 3.4e-11 73.2 267 27.3
Gohir.D11G124800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 3.4e-11 73.2 274 28.5
RcHm_v2.0_Chr6g0291821 Rosa chinensis HOM05D004053 ORTHO05D005065 5.7e-11 72.4 201 29.9
Aqoxy2G03230 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 9.8e-11 71.6 275 29.1
arahy.Tifrunner.gnm1.ann1.V8R19R Arachis hypogaea HOM05D004053 ORTHO05D005065 9.8e-11 71.6 248 28.2
CARHR251290 Cardamine hirsuta HOM05D004053 ORTHO05D005065 9.8e-11 71.6 266 27.8
Glyma.03G150700 Glycine max HOM05D004053 ORTHO05D005065 9.8e-11 71.6 272 28.3
Lj1C43T4 Lonicera japonica HOM05D004053 ORTHO05D005065 9.8e-11 71.6 275 30.2
MD03G1269800 Malus domestica HOM05D004053 ORTHO05D005065 9.8e-11 71.6 280 27.9
Psat3g065760 Pisum sativum HOM05D004053 ORTHO05D005065 9.8e-11 71.6 264 29.9
CiPaw.08G102900 Carya illinoinensis HOM05D004053 ORTHO05D005065 1.3e-10 71.2 269 28.3
BraA03t12252Z Brassica rapa HOM05D004053 ORTHO05D005065 1.7e-10 70.9 259 25.9
DCAR_012450 Daucus carota HOM05D004053 ORTHO05D005065 1.7e-10 70.9 269 27.1
Eucgr.K03405 Eucalyptus grandis HOM05D004053 ORTHO05D005065 1.7e-10 70.9 271 26.9
Glyma.02G149700 Glycine max HOM05D004053 ORTHO05D005065 1.7e-10 70.9 271 30.6
Glyma.10G024200 Glycine max HOM05D004053 ORTHO05D005065 1.7e-10 70.9 178 35.4
BolC3t16035H Brassica oleracea HOM05D004053 ORTHO05D005065 2.2e-10 70.5 261 27.2
A03p30730 Brassica napus HOM05D004053 ORTHO05D005065 2.8e-10 70.1 259 25.5
Duzib211G0472 Durio zibethinus HOM05D004053 ORTHO05D005065 2.8e-10 70.1 270 26.7
PSO832G4321 Papaver somniferum HOM05D004053 ORTHO05D005065 2.8e-10 70.1 283 28.3
Phvul.007G169200 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 2.8e-10 70.1 270 29.3
AT4G02920 Arabidopsis thaliana HOM05D004053 ORTHO05D005065 3.7e-10 69.7 158 34.2
Sp6g02950 Schrenkiella parvula HOM05D004053 ORTHO05D005065 3.7e-10 69.7 258 26.0
C03p37430 Brassica napus HOM05D004053 ORTHO05D005065 4.9e-10 69.3 262 26.7
Lj5g0001920 Lotus japonicus HOM05D004053 ORTHO05D005065 6.3e-10 68.9 271 24.7
vmacro02546 Vaccinium macrocarpon HOM05D004053 ORTHO05D005065 6.3e-10 68.9 274 27.0
EL10Ac7g17207 Beta vulgaris HOM05D004053 ORTHO05D005065 1.1e-09 68.2 274 26.3
Thhalv10028686m.g Eutrema salsugineum HOM05D004053 ORTHO05D005065 1.1e-09 68.2 267 26.6
THA.LOC104801216 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 1.1e-09 68.2 274 27.4
AL6G50010 Arabidopsis lyrata HOM05D004053 ORTHO05D005065 1.4e-09 67.8 263 27.4
Zm00001eb417790 Zea mays HOM05D004053 ORTHO05D005065 1.4e-09 67.8 254 27.6
Sc05g0005080 Simmondsia chinensis HOM05D004053 ORTHO05D005065 1.8e-09 67.4 277 29.2
THA.LOC104815946 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 2.4e-09 67.0 275 27.6
VMungo1383G0556 Vigna mungo HOM05D004053 ORTHO05D005065 2.4e-09 67.0 274 28.1
Ca_10403_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 4.1e-09 66.2 266 27.1
CDE05G2296 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 5.4e-09 65.9 199 30.7
TPR.G32826 Trifolium pratense HOM05D004053 ORTHO05D005065 7.0e-09 65.5 262 28.6
Lj1g0006875 Lotus japonicus HOM05D004053 ORTHO05D005065 9.2e-09 65.1 269 28.6
Potri.014G138200 Populus trichocarpa HOM05D004053 ORTHO05D005065 9.2e-09 65.1 271 26.2
Ca_08561_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 1.2e-08 64.7 261 29.1
Ca_08595_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 1.2e-08 64.7 261 29.1
Medtr7g094470 Medicago truncatula HOM05D004053 ORTHO05D005065 1.2e-08 64.7 265 30.9
Nn1g02136 Nelumbo nucifera HOM05D004053 ORTHO05D005065 1.2e-08 64.7 277 29.6
CiPaw.07G095100 Carya illinoinensis HOM05D004053 ORTHO05D005065 1.6e-08 64.3 268 27.6
CDE11G0853 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 2.7e-08 63.5 169 29.6
PGR044G2575 Punica granatum HOM05D004053 ORTHO05D005065 2.7e-08 63.5 267 26.6
Cpa.g.sc9.119 Carica papaya HOM05D004053 ORTHO05D005065 5.9e-08 62.4 275 27.6
BcaB01g02487 Brassica carinata HOM05D004053 ORTHO05D005065 7.8e-08 62.0 155 32.3
HanXRQChr01g0002441 Helianthus annuus HOM05D004053 ORTHO05D005065 1.3e-07 61.2 174 31.6
Aqoxy5G00541 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 2.3e-07 60.5 283 27.6
TPR.G13395 Trifolium pratense HOM05D004053 ORTHO05D005065 2.9e-07 60.1 261 27.6
Aa31LG5G2500 Aethionema arabicum HOM05D004053 ORTHO05D005065 3.9e-07 59.7 271 25.5
Medtr1g089980 Medicago truncatula HOM05D004053 ORTHO05D005065 3.9e-07 59.7 130 33.8
Potri.002G215800 Populus trichocarpa HOM05D004053 ORTHO05D005065 3.9e-07 59.7 268 28.0
Sp1g02330 Schrenkiella parvula HOM05D004053 ORTHO05D005065 1.5e-06 57.8 171 29.8
Thhalv10007898m.g Eutrema salsugineum HOM05D004053 ORTHO05D005065 2.5e-06 57.0 75 40.0
arahy.Tifrunner.gnm1.ann1.U9BU7H Arachis hypogaea HOM05D004053 ORTHO05D005065 3.3e-06 56.6 171 31.6
AL1G12850 Arabidopsis lyrata HOM05D004053 ORTHO05D005065 4.3e-06 56.2 162 30.9
Psat6g168840 Pisum sativum HOM05D004053 ORTHO05D005065 4.3e-06 56.2 268 26.5
BcaC03g16190 Brassica carinata HOM05D004053 ORTHO05D005065 5.6e-06 55.8 77 36.4
A02p25050 Brassica napus HOM05D004053 ORTHO05D005065 5.6e-06 55.8 77 36.4
C02p39720 Brassica napus HOM05D004053 ORTHO05D005065 5.6e-06 55.8 77 36.4
BolC2t09985H Brassica oleracea HOM05D004053 ORTHO05D005065 5.6e-06 55.8 77 36.4
BraA02t07493Z Brassica rapa HOM05D004053 ORTHO05D005065 5.6e-06 55.8 77 36.4
CsaV3_6G036930 Cucumis sativus L. HOM05D004053 ORTHO05D005065 9.5e-06 55.1 171 28.1
Sed0017907 Sechium edule HOM05D004053 ORTHO05D005065 9.5e-06 55.1 99 33.3


User provided reference genes

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