Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6528 Utricularia gibba HOM05D004054 ORTHO05D004945 0.0e+00 1570.1 791 100.0
Migut.L01344 Erythranthe guttata HOM05D004054 ORTHO05D004945 1.4e-204 717.2 872 51.6
MSTRG.671 Avicennia marina HOM05D004054 ORTHO05D004945 1.8e-201 706.8 871 49.8
SGA_v2.0_scaffold302G47866 Striga asiatica HOM05D004054 ORTHO05D004945 3.7e-194 682.6 875 49.5
SalBow2G0733 Salvia bowleyana HOM05D004054 ORTHO05D004945 5.3e-193 678.7 946 47.0
SalBow2G2854 Salvia bowleyana HOM05D004054 ORTHO05D004945 2.9e-183 646.4 1026 43.3
Sopen05g002990 Solanum pennellii HOM05D004054 ORTHO05D004945 2.9e-183 646.4 862 47.4
Peaxi162Scf00209g00326 Petunia axillaris HOM05D004054 ORTHO05D004945 6.1e-181 638.6 899 45.8
Actinidia05393 Actinidia chinensis HOM05D004054 ORTHO05D004945 1.4e-180 637.5 881 48.0
Cfa009037 Carpinus fangiana HOM05D004054 ORTHO05D004945 5.7e-179 632.1 882 45.6
Rhsim01G0215700 Rhododendron simsii HOM05D004054 ORTHO05D004945 7.5e-179 631.7 882 46.4
Cc11_g13490 Coffea canephora HOM05D004054 ORTHO05D004945 9.8e-179 631.3 880 44.7
Nitab4.5_0009649g0020 Nicotiana tabacum HOM05D004054 ORTHO05D004945 2.2e-178 630.2 851 46.8
Oeu011693.1 Olea europaea HOM05D004054 ORTHO05D004945 2.4e-177 626.7 760 50.5
TAR362G0462 Trochodendron aralioides HOM05D004054 ORTHO05D004945 5.9e-176 622.1 898 44.9
Gohir.D13G068400 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.7e-175 620.5 871 44.1
Gorai.013G077900 Gossypium raimondii HOM05D004054 ORTHO05D004945 1.7e-175 620.5 871 44.0
QL03p065666 Quercus lobata HOM05D004054 ORTHO05D004945 3.9e-175 619.4 880 45.3
Gohir.A13G052300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 6.6e-175 618.6 874 44.2
Duzib268G1532 Durio zibethinus HOM05D004054 ORTHO05D004945 1.2e-173 614.4 878 44.9
Thecc.02G355300 Theobroma cacao HOM05D004054 ORTHO05D004945 6.8e-172 608.6 869 44.9
Hma1.2p1_1545F.1_g289900 Hydrangea macrophylla HOM05D004054 ORTHO05D004945 8.9e-172 608.2 762 49.2
MBI11_g00106_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 2.0e-171 607.1 893 44.8
Nitab4.5_0008717g0030 Nicotiana tabacum HOM05D004054 ORTHO05D004945 2.6e-171 606.7 851 45.8
GSVIVG01036940001 Vitis vinifera HOM05D004054 ORTHO05D004945 7.5e-171 605.1 871 45.5
Oeu028539.1 Olea europaea HOM05D004054 ORTHO05D004945 6.4e-170 602.1 908 43.5
Aqoxy5G00175 Aquilegia oxysepala HOM05D004054 ORTHO05D004945 1.4e-169 600.9 887 44.6
Lsat_1_v5_gn_8_54080 Lactuca sativa HOM05D004054 ORTHO05D004945 1.9e-169 600.5 888 45.3
vmacro07429 Vaccinium macrocarpon HOM05D004054 ORTHO05D004945 1.2e-168 597.8 921 44.0
ClCG05G024580 Citrullus lanatus HOM05D004054 ORTHO05D004945 4.6e-168 595.9 882 43.4
MD13G1079000 Malus domestica HOM05D004054 ORTHO05D004945 6.0e-168 595.5 859 44.9
Manes.05G096500 Manihot esculenta HOM05D004054 ORTHO05D004945 2.3e-167 593.6 754 48.0
Atru.chr11.1851 Acer truncatum HOM05D004054 ORTHO05D004945 1.1e-166 591.3 860 45.1
arahy.Tifrunner.gnm1.ann1.K6PP8H Arachis hypogaea HOM05D004054 ORTHO05D004945 1.5e-166 590.9 879 44.3
Duzib248G1634 Durio zibethinus HOM05D004054 ORTHO05D004945 7.3e-166 588.6 849 44.4
Lj4g0012636 Lotus japonicus HOM05D004054 ORTHO05D004945 9.5e-166 588.2 877 43.1
Ciclev10030693m.g Citrus clementina HOM05D004054 ORTHO05D004945 2.8e-165 586.6 880 43.8
Ca_22853_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 1.8e-164 583.9 883 42.6
Carub.0003s1763 Capsella rubella HOM05D004054 ORTHO05D004945 3.1e-164 583.2 866 43.5
Sc11g0001680 Simmondsia chinensis HOM05D004054 ORTHO05D004945 3.1e-164 583.2 873 43.3
GSVIVG01020074001 Vitis vinifera HOM05D004054 ORTHO05D004945 5.2e-164 582.4 887 43.5
MBI17_g39912_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 6.8e-164 582.0 870 44.1
Haze_12066 Corylus avellana HOM05D004054 ORTHO05D004945 2.0e-163 580.5 985 40.4
PSO832G3945 Papaver somniferum HOM05D004054 ORTHO05D004945 2.0e-163 580.5 885 43.6
FAN12G3951 Fragaria x ananassa HOM05D004054 ORTHO05D004945 2.6e-163 580.1 887 44.2
Potri.010G033900 Populus trichocarpa HOM05D004054 ORTHO05D004945 2.6e-163 580.1 870 44.1
Dinv24955 Davidia involucrata HOM05D004054 ORTHO05D004945 4.4e-163 579.3 731 49.8
Lalb_Chr16g0392581 Lupinus albus HOM05D004054 ORTHO05D004945 4.4e-163 579.3 898 42.0
CsaV3_5G032370 Cucumis sativus L. HOM05D004054 ORTHO05D004945 9.8e-163 578.2 881 43.0
VMungo0251G1664 Vigna mungo HOM05D004054 ORTHO05D004945 9.8e-163 578.2 903 43.1
Prupe.1G267800 Prunus persica HOM05D004054 ORTHO05D004945 1.3e-162 577.8 883 43.7
Sed0026408 Sechium edule HOM05D004054 ORTHO05D004945 1.3e-162 577.8 874 42.1
ECA247G4086 Erigeron canadensis HOM05D004054 ORTHO05D004945 2.2e-162 577.0 863 43.5
CSS0048330 Camellia sinensis var. sinensis HOM05D004054 ORTHO05D004945 3.7e-162 576.2 862 45.4
TWI36G0714 Tripterygium wilfordii HOM05D004054 ORTHO05D004945 8.3e-162 575.1 878 43.1
Phvul.003G069800 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 1.1e-161 574.7 884 43.6
MD16G1078700 Malus domestica HOM05D004054 ORTHO05D004945 1.9e-161 573.9 750 47.6
COL.COLO4_07923 Corchorus olitorius HOM05D004054 ORTHO05D004945 4.1e-161 572.8 870 43.9
FvH4_4g31960 Fragaria vesca HOM05D004054 ORTHO05D004945 5.4e-161 572.4 888 44.1
FAN17G1509 Fragaria x ananassa HOM05D004054 ORTHO05D004945 3.5e-160 569.7 888 43.9
Gorai.008G182900 Gossypium raimondii HOM05D004054 ORTHO05D004945 3.5e-160 569.7 875 42.6
RcHm_v2.0_Chr4g0440641 Rosa chinensis HOM05D004054 ORTHO05D004945 4.6e-160 569.3 885 44.2
DCAR_027382 Daucus carota HOM05D004054 ORTHO05D004945 1.0e-159 568.2 878 43.6
PGR102G2139 Punica granatum HOM05D004054 ORTHO05D004945 1.0e-159 568.2 879 42.7
Glyma.08G296300 Glycine max HOM05D004054 ORTHO05D004945 1.3e-159 567.8 887 43.5
RcHm_v2.0_Chr1g0331881 Rosa chinensis HOM05D004054 ORTHO05D004945 3.9e-159 566.2 882 43.3
Sp3g16020 Schrenkiella parvula HOM05D004054 ORTHO05D004945 6.6e-159 565.5 876 42.9
Psat4g132120 Pisum sativum HOM05D004054 ORTHO05D004945 1.5e-158 564.3 884 41.6
RcHm_v2.0_Chr1g0353921 Rosa chinensis HOM05D004054 ORTHO05D004945 1.9e-158 563.9 880 43.2
Medtr8g469270 Medicago truncatula HOM05D004054 ORTHO05D004945 3.3e-158 563.1 892 42.2
Sabra10G0030700 Salix brachista HOM05D004054 ORTHO05D004945 5.6e-158 562.4 742 47.2
Glyma.18G126000 Glycine max HOM05D004054 ORTHO05D004945 1.2e-157 561.2 848 44.2
Thhalv10020058m.g Eutrema salsugineum HOM05D004054 ORTHO05D004945 1.6e-157 560.8 867 42.3
TPR.G33257 Trifolium pratense HOM05D004054 ORTHO05D004945 1.6e-157 560.8 886 42.1
FAN22G1878 Fragaria x ananassa HOM05D004054 ORTHO05D004945 2.1e-157 560.5 898 43.7
Hund25271 Selenicereus undatus HOM05D004054 ORTHO05D004945 3.6e-157 559.7 834 43.6
CARHR093230 Cardamine hirsuta HOM05D004054 ORTHO05D004945 1.1e-156 558.1 869 42.6
PSO764G0096 Papaver somniferum HOM05D004054 ORTHO05D004945 3.1e-156 556.6 888 42.0
AT3G17900 Arabidopsis thaliana HOM05D004054 ORTHO05D004945 4.0e-156 556.2 877 42.5
Solyc05g007030.4 Solanum lycopersicum HOM05D004054 ORTHO05D004945 6.8e-156 555.4 609 53.7
FAN07G1439 Fragaria x ananassa HOM05D004054 ORTHO05D004945 8.9e-156 555.1 902 43.6
Gohir.D12G170300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 2.0e-155 553.9 851 42.8
AL3G31070 Arabidopsis lyrata HOM05D004054 ORTHO05D004945 3.4e-155 553.1 870 42.0
HanXRQChr12g0369801 Helianthus annuus HOM05D004054 ORTHO05D004945 8.3e-154 548.5 872 42.3
BcaB04g20809 Brassica carinata HOM05D004054 ORTHO05D004945 2.7e-152 543.5 869 42.6
AUR62026447 Chenopodium quinoa HOM05D004054 ORTHO05D004945 1.0e-151 541.6 858 42.2
MELO3C012068.2 Cucumis melo HOM05D004054 ORTHO05D004945 1.3e-151 541.2 855 42.1
THA.LOC104820344 Tarenaya hassleriana HOM05D004054 ORTHO05D004945 5.1e-151 539.3 873 41.6
BraA03t13202Z Brassica rapa HOM05D004054 ORTHO05D004945 2.5e-150 537.0 873 42.4
A01p36490 Brassica napus HOM05D004054 ORTHO05D004945 1.6e-149 534.3 856 42.1
C03p49280 Brassica napus HOM05D004054 ORTHO05D004945 2.1e-149 533.9 874 42.7
Glyma.02G021900 Glycine max HOM05D004054 ORTHO05D004945 6.8e-148 528.9 875 40.5
BolC1t04586H Brassica oleracea HOM05D004054 ORTHO05D004945 1.2e-147 528.1 826 41.8
Aa31LG8G4770 Aethionema arabicum HOM05D004054 ORTHO05D004945 2.0e-147 527.3 919 39.3
C01p46250 Brassica napus HOM05D004054 ORTHO05D004945 3.4e-147 526.6 826 41.6
BolC3t17216H Brassica oleracea HOM05D004054 ORTHO05D004945 3.4e-147 526.6 863 42.1
BcaC09g48754 Brassica carinata HOM05D004054 ORTHO05D004945 7.6e-147 525.4 826 41.5
BcaC01g03722 Brassica carinata HOM05D004054 ORTHO05D004945 2.9e-146 523.5 850 42.7
Nn3g19739 Nelumbo nucifera HOM05D004054 ORTHO05D004945 3.8e-146 523.1 648 48.5
Lalb_Chr09g0335271 Lupinus albus HOM05D004054 ORTHO05D004945 2.4e-145 520.4 770 44.0
ATR0564G248 Amborella trichopoda HOM05D004054 ORTHO05D004945 5.4e-145 519.2 862 41.6
BraA01t03713Z Brassica rapa HOM05D004054 ORTHO05D004945 3.5e-144 516.5 846 41.6
A03p40440 Brassica napus HOM05D004054 ORTHO05D004945 6.0e-144 515.8 753 44.4
Psat2g124400 Pisum sativum HOM05D004054 ORTHO05D004945 3.9e-143 513.1 866 40.2
CDE09G0195 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 5.1e-143 512.7 889 39.7
AUR62026254 Chenopodium quinoa HOM05D004054 ORTHO05D004945 6.6e-143 512.3 854 41.6
Medtr5g038440 Medicago truncatula HOM05D004054 ORTHO05D004945 1.9e-142 510.8 864 41.6
Eucgr.B03410 Eucalyptus grandis HOM05D004054 ORTHO05D004945 7.3e-142 508.8 878 40.8
HPP92_011033 Vanilla planifolia HOM05D004054 ORTHO05D004945 9.6e-142 508.4 847 40.5
Zm00001eb409770 Zea mays HOM05D004054 ORTHO05D004945 1.4e-137 494.6 868 40.0
Cpa.g.sc5.276 Carica papaya HOM05D004054 ORTHO05D004945 7.1e-137 492.3 557 52.2
arahy.Tifrunner.gnm1.ann1.S53SYG Arachis hypogaea HOM05D004054 ORTHO05D004945 4.6e-136 489.6 850 39.5
Ca_04741_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 1.0e-135 488.4 846 39.7
BcaB04g18970 Brassica carinata HOM05D004054 ORTHO05D004945 3.0e-135 486.9 824 42.1
Hund05913 Selenicereus undatus HOM05D004054 ORTHO05D004945 9.3e-129 465.3 775 41.2
EL10Ac6g13147 Beta vulgaris HOM05D004054 ORTHO05D004945 4.3e-126 456.4 868 38.8
TPR.G13762 Trifolium pratense HOM05D004054 ORTHO05D004945 7.4e-126 455.7 788 40.2
arahy.Tifrunner.gnm1.ann1.B2D650 Arachis hypogaea HOM05D004054 ORTHO05D004945 1.3e-125 454.9 850 38.1
Lsat_1_v5_gn_4_9281 Lactuca sativa HOM05D004054 ORTHO05D004945 2.8e-125 453.8 771 41.0
Gohir.A12G166800 Gossypium hirsutum HOM05D004054 ORTHO05D004945 3.1e-124 450.3 549 49.9
Lalb_Chr17g0340361 Lupinus albus HOM05D004054 ORTHO05D004945 3.1e-124 450.3 803 38.9
HanXRQChr03g0092771 Helianthus annuus HOM05D004054 ORTHO05D004945 3.0e-119 433.7 692 41.6
SEGI_39580 Sequoiadendron giganteum HOM05D004054 ORTHO05D004945 2.5e-118 430.6 925 34.9
Lj2g0020807 Lotus japonicus HOM05D004054 ORTHO05D004945 7.4e-118 429.1 724 40.3
ECA234G1496 Erigeron canadensis HOM05D004054 ORTHO05D004945 8.2e-117 425.6 798 38.0
CiPaw.06G080700 Carya illinoinensis HOM05D004054 ORTHO05D004945 3.0e-111 407.1 446 54.3
unitig_8.g3947 Utricularia gibba HOM05D004054 ORTHO05D004945 8.8e-103 379.0 540 43.7
VMungo1215G1372 Vigna mungo HOM05D004054 ORTHO05D004945 1.7e-101 374.8 919 33.1
Mapoly0224s0002 Marchantia polymorpha HOM05D004054 ORTHO05D004945 1.4e-97 361.7 695 36.0
CDE02G2379 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 1.8e-95 354.8 734 36.0
Pp3c16_680 Physcomitrium patens HOM05D004054 ORTHO05D004945 2.0e-94 351.3 607 37.4
Zm00001eb066230 Zea mays HOM05D004054 ORTHO05D004945 3.3e-94 350.5 577 42.1
Ah.03g132020 Amaranthus hybridus HOM05D004054 ORTHO05D004945 3.2e-89 334.0 488 43.6
SMO119G0368 Selaginella moellendorffii HOM05D004054 ORTHO05D004945 4.2e-89 333.6 588 35.5
Nn1g02896 Nelumbo nucifera HOM05D004054 ORTHO05D004945 6.7e-87 326.2 887 32.1
Phvul.002G066700 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 2.0e-75 288.1 584 36.0
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 1.0e-63 249.2 431 39.9
AagrBONN_evm.TU.Sc2ySwM_228.4114 Anthoceros agrestis HOM05D004054 ORTHO05D004945 1.4e-55 222.2 436 33.3
Phvul.002G066500 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 4.7e-48 197.2 282 45.0
Potri.008G194566 Populus trichocarpa HOM05D004054 ORTHO05D004945 3.5e-43 181.0 266 44.4
MSTRG.2359 Avicennia marina HOM05D004054 ORTHO05D004945 2.0e-38 165.2 169 58.0
CiPaw.06G080600 Carya illinoinensis HOM05D004054 ORTHO05D004945 1.6e-35 155.6 378 33.1
Potri.008G194632 Populus trichocarpa HOM05D004054 ORTHO05D004945 2.8e-32 144.8 182 52.2
Cpa.g.sc5.277 Carica papaya HOM05D004054 ORTHO05D004945 8.7e-26 123.2 318 32.4
RcHm_v2.0_Chr1g0331861 Rosa chinensis HOM05D004054 ORTHO05D004945 7.3e-25 120.2 138 51.4
C03p36410 Brassica napus HOM05D004054 ORTHO05D004945 9.0e-23 113.2 390 31.5
BolC3t15954H Brassica oleracea HOM05D004054 ORTHO05D004945 9.0e-23 113.2 390 31.5
C02p33030 Brassica napus HOM05D004054 ORTHO05D004945 1.6e-19 102.4 392 31.4
Gohir.A12G166900 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.3e-18 99.4 222 32.9
CBR_g39858 Chara braunii HOM05D004054 ORTHO05D009492 3.3e-17 94.7 324 27.2
A05p04500 Brassica napus HOM05D004054 ORTHO05D004945 4.0e-15 87.8 161 40.4
C03p62480 Brassica napus HOM05D004054 ORTHO05D004945 4.0e-15 87.8 161 40.4
Lalb_Chr17g0340371 Lupinus albus HOM05D004054 ORTHO05D004945 2.6e-14 85.1 57 73.7
CAN.G793.43 Capsicum annuum HOM05D004054 ORTHO05D004945 1.3e-10 72.8 145 35.9
CBR_g39856 Chara braunii HOM05D000019 ORTHO05D000353 6.7e-10 70.5 217 23.5
Oeu011694.1 Olea europaea HOM05D004054 ORTHO05D049449 1.5e-09 69.3 93 44.1
unitig_8.g3946 Utricularia gibba HOM05D004054 ORTHO05D004945 3.3e-09 68.2 177 32.2
Lsat_1_v5_gn_3_52120 Lactuca sativa HOM05D004054 ORTHO05D004945 5.6e-09 67.4 63 52.4
Lsat_1_v5_gn_7_73540 Lactuca sativa HOM05D004054 ORTHO05D004945 1.6e-08 65.9 80 46.2
CBR_g39853 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-08 65.5 47 61.7
PGSC0003DMG402017622 Solanum tuberosum HOM05D004054 ORTHO05D004945 2.1e-08 65.5 104 43.3
BolC3t18505H Brassica oleracea HOM05D004054 ORTHO05D004945 1.8e-07 62.4 179 33.0
Aqoxy4G02344 Aquilegia oxysepala HOM05D004054 ORTHO05D004945 4.0e-07 61.2 82 42.7
C06p10280 Brassica napus HOM05D011797 ORTHO05D012335 7.6e-06 57.0 34 82.4


User provided reference genes

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