Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6479 Utricularia gibba HOM05D003533 ORTHO05D004009 1.2e-91 339.7 167 100.0
Migut.L01388 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.0e-16 90.9 77 57.1
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 1.4e-13 80.5 77 49.4
SalBow2G1603 Salvia bowleyana HOM05D003533 ORTHO05D004009 3.0e-13 79.3 75 49.3
SalBow2G3186 Salvia bowleyana HOM05D003533 ORTHO05D004009 3.0e-13 79.3 75 49.3
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 5.2e-13 78.6 80 47.5
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 5.2e-13 78.6 72 52.8
Migut.E00134 Erythranthe guttata HOM05D003533 ORTHO05D004009 8.8e-13 77.8 77 51.9
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 1.5e-12 77.0 79 53.2
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 2.6e-12 76.3 78 50.0
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 4.4e-12 75.5 82 50.0
Aqoxy3G03117 Aquilegia oxysepala HOM05D003533 ORTHO05D004009 1.7e-11 73.6 88 45.5
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.2e-11 73.2 81 46.9
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 2.8e-11 72.8 88 45.5
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.8e-11 72.8 84 44.0
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 4.8e-11 72.0 81 46.9
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 8.2e-11 71.2 81 46.9
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.1e-10 70.9 84 42.9
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.1e-10 70.9 73 53.4
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 1.4e-10 70.5 69 50.7
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.4e-10 70.5 78 48.7
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.4e-10 69.7 81 45.7
MBI14_g31145_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 2.4e-10 69.7 78 47.4
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 3.1e-10 69.3 84 42.9
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 3.1e-10 69.3 84 42.9
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 3.1e-10 69.3 89 42.7
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 3.1e-10 69.3 77 50.6
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 4.1e-10 68.9 75 46.7
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 5.3e-10 68.6 69 52.2
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 7.0e-10 68.2 77 45.5
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 7.0e-10 68.2 82 45.1
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 7.0e-10 68.2 82 45.1
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 9.1e-10 67.8 73 52.1
HanXRQChr09g0271891 Helianthus annuus HOM05D003533 ORTHO05D004009 9.1e-10 67.8 76 44.7
Peaxi162Scf01141g00003 Petunia axillaris HOM05D003533 ORTHO05D004009 9.1e-10 67.8 79 44.3
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 9.1e-10 67.8 75 49.3
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 1.2e-09 67.4 73 49.3
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.2e-09 67.4 74 47.3
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 1.6e-09 67.0 75 50.7
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.0e-09 66.6 77 44.2
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 3.5e-09 65.9 81 43.2
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 3.5e-09 65.9 81 43.2
MBI14_g31147_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 4.5e-09 65.5 81 44.4
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 4.5e-09 65.5 71 50.7
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 4.5e-09 65.5 82 45.1
Phvul.009G182200 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 7.7e-09 64.7 77 48.1
Glyma.06G186200 Glycine max HOM05D003533 ORTHO05D004009 1.0e-08 64.3 77 46.8
Nitab4.5_0002312g0110 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.0e-08 64.3 78 43.6
Prupe.1G261100 Prunus persica HOM05D003533 ORTHO05D004009 1.3e-08 63.9 86 46.5
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 2.2e-08 63.2 79 46.8
Cc11_g14120 Coffea canephora HOM05D003533 ORTHO05D004009 2.2e-08 63.2 76 42.1
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 2.2e-08 63.2 95 41.1
Medtr3g078420 Medicago truncatula HOM05D003533 ORTHO05D004009 2.2e-08 63.2 77 46.8
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.9e-08 62.8 74 43.2
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 2.9e-08 62.8 85 42.4
TPR.G31485 Trifolium pratense HOM05D003533 ORTHO05D004009 2.9e-08 62.8 74 50.0
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 3.8e-08 62.4 85 41.2
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 3.8e-08 62.4 76 46.1
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 3.8e-08 62.4 73 49.3
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 5.0e-08 62.0 82 41.5
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 5.0e-08 62.0 77 44.2
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 6.5e-08 61.6 72 44.4
CAN.G159.12 Capsicum annuum HOM05D003533 ORTHO05D004009 6.5e-08 61.6 72 41.7
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 8.5e-08 61.2 77 44.2
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 8.5e-08 61.2 77 44.2
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 8.5e-08 61.2 79 44.3
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 8.5e-08 61.2 77 48.1
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 8.5e-08 61.2 67 46.3
Solyc05g006390.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 8.5e-08 61.2 72 43.1
A08p30040 Brassica napus HOM05D003533 ORTHO05D004009 1.1e-07 60.8 74 45.9
BraA08t34939Z Brassica rapa HOM05D003533 ORTHO05D004009 1.1e-07 60.8 74 45.9
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.1e-07 60.8 79 41.8
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 1.5e-07 60.5 81 40.7
ECA247G3580 Erigeron canadensis HOM05D003533 ORTHO05D004009 1.5e-07 60.5 72 40.3
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 1.5e-07 60.5 95 42.1
Oeu005690.1 Olea europaea HOM05D003533 ORTHO05D004009 1.5e-07 60.5 77 42.9
DCAR_026103 Daucus carota HOM05D003533 ORTHO05D004009 1.9e-07 60.1 67 46.3
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 1.9e-07 60.1 80 43.8
Sopen05g002310 Solanum pennellii HOM05D003533 ORTHO05D004009 1.9e-07 60.1 72 41.7
PGSC0003DMG400022647 Solanum tuberosum HOM05D003533 ORTHO05D004009 1.9e-07 60.1 71 42.3
Ca_16210_v3 Cicer arietinum L. HOM05D003533 ORTHO05D004009 2.5e-07 59.7 77 45.5
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 2.5e-07 59.7 83 43.4
Nitab4.5_0003386g0040 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.5e-07 59.7 78 47.4
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 2.5e-07 59.7 82 45.1
BcaB07g31922 Brassica carinata HOM05D003533 ORTHO05D004009 3.2e-07 59.3 80 41.2
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 3.2e-07 59.3 77 45.5
C08p19120 Brassica napus HOM05D003533 ORTHO05D004009 4.2e-07 58.9 41 65.9
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 4.2e-07 58.9 74 41.9
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 4.2e-07 58.9 73 45.2
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 4.2e-07 58.9 83 38.6
AL1G31580 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 5.5e-07 58.5 81 39.5
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 5.5e-07 58.5 72 45.8
Nitab4.5_0002312g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 5.5e-07 58.5 80 40.0
Solyc03g113810.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 5.5e-07 58.5 77 42.9
Carub.0005s1428 Capsella rubella HOM05D003533 ORTHO05D004009 7.2e-07 58.2 71 42.3
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 7.2e-07 58.2 77 44.2
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 9.4e-07 57.8 82 41.5
Sp1g16980 Schrenkiella parvula HOM05D003533 ORTHO05D004009 9.4e-07 57.8 85 38.8
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 1.2e-06 57.4 80 45.0
BraA09t41332Z Brassica rapa HOM05D003533 ORTHO05D004009 1.2e-06 57.4 67 46.3
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.6e-06 57.0 85 42.4
PSO013G0065 Papaver somniferum HOM05D003533 ORTHO05D004009 1.6e-06 57.0 81 39.5
Sopen03g032860 Solanum pennellii HOM05D003533 ORTHO05D004009 1.6e-06 57.0 78 42.3
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.6e-06 57.0 71 42.3
C08p42830 Brassica napus HOM05D003533 ORTHO05D004009 2.1e-06 56.6 67 44.8
BolC8t49535H Brassica oleracea HOM05D003533 ORTHO05D004009 2.1e-06 56.6 41 63.4
BolC8t51839H Brassica oleracea HOM05D003533 ORTHO05D004009 2.1e-06 56.6 67 44.8
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 2.1e-06 56.6 66 47.0
Rhsim12G0161300 Rhododendron simsii HOM05D003533 ORTHO05D004009 2.7e-06 56.2 66 50.0
CSS0048422 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.6e-06 55.8 64 48.4
A09p59550 Brassica napus HOM05D003533 ORTHO05D004009 4.7e-06 55.5 79 39.2
Oeu060842.1 Olea europaea HOM05D003533 ORTHO05D004009 6.1e-06 55.1 74 40.5
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 6.1e-06 55.1 72 43.1
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 6.1e-06 55.1 80 35.0
A06p15230 Brassica napus HOM05D003533 ORTHO05D004009 8.0e-06 54.7 80 38.8
BraA06t24637Z Brassica rapa HOM05D003533 ORTHO05D004009 8.0e-06 54.7 80 38.8
Cfa009093 Carpinus fangiana HOM05D003533 ORTHO05D004009 8.0e-06 54.7 89 39.3
Thhalv10010873m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 8.0e-06 54.7 75 41.3
PGSC0003DMG400024583 Solanum tuberosum HOM05D003533 ORTHO05D004009 8.0e-06 54.7 77 41.6


User provided reference genes

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