Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 5.3e-75 284.3 142 100.0
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 1.4e-46 189.9 143 69.9
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 4.1e-27 125.2 142 52.1
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 2.7e-23 112.5 143 51.7
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 1.0e-22 110.5 147 46.3
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 2.4e-19 99.4 141 47.5
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 1.6e-18 96.7 118 48.3
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 4.5e-18 95.1 137 48.2
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 2.8e-15 85.9 125 44.8
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 3.0e-14 82.4 99 51.5
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 2.2e-12 76.3 108 49.1
SalBow8G4409 Salvia bowleyana HOM05D007558 ORTHO05D009245 8.3e-12 74.3 143 39.9
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 5.4e-11 71.6 110 46.4
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 1.6e-10 70.1 138 37.0
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.6e-10 70.1 114 40.4
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 1.6e-10 70.1 115 40.9
MSTRG.591 Avicennia marina HOM05D007558 ORTHO05D009245 2.0e-10 69.7 114 43.9
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 2.7e-10 69.3 123 39.0
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 4.5e-10 68.6 133 42.1
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 1.3e-09 67.0 123 41.5
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 1.3e-09 67.0 101 42.6
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 2.9e-09 65.9 112 40.2
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 2.9e-09 65.9 123 39.0
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 3.8e-09 65.5 122 37.7
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 5.0e-09 65.1 131 38.9
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 5.0e-09 65.1 127 39.4
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 6.6e-09 64.7 101 36.6
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 8.6e-09 64.3 110 41.8
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 8.6e-09 64.3 114 36.8
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 8.6e-09 64.3 139 37.4
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 1.1e-08 63.9 127 41.7
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 1.9e-08 63.2 106 40.6
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 2.5e-08 62.8 108 39.8
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 2.5e-08 62.8 105 39.0
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 2.5e-08 62.8 127 37.0
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 4.3e-08 62.0 127 37.8
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 4.3e-08 62.0 105 41.0
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 5.6e-08 61.6 127 37.8
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 5.6e-08 61.6 105 39.0
SGA_v2.0_scaffold165G38235 Striga asiatica HOM05D007558 ORTHO05D009245 5.6e-08 61.6 118 43.2
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 9.5e-08 60.8 104 44.2
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 9.5e-08 60.8 123 35.8
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 9.5e-08 60.8 131 35.1
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 9.5e-08 60.8 108 40.7
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 1.2e-07 60.5 103 35.0
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 1.6e-07 60.1 133 31.6
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 1.6e-07 60.1 92 43.5
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 2.1e-07 59.7 91 40.7
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 2.8e-07 59.3 71 49.3
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.8e-07 59.3 93 38.7
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.8e-07 59.3 93 38.7
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 2.8e-07 59.3 93 38.7
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 3.6e-07 58.9 110 39.1
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 4.7e-07 58.5 103 38.8
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.7e-07 58.5 119 37.0
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 4.7e-07 58.5 110 33.6
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 6.1e-07 58.2 98 41.8
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 6.1e-07 58.2 103 37.9
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 8.0e-07 57.8 90 45.6
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 8.0e-07 57.8 119 37.0
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.0e-06 57.4 113 37.2
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 1.0e-06 57.4 102 42.2
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 1.8e-06 56.6 77 44.2
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 2.3e-06 56.2 117 35.0
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 3.0e-06 55.8 133 34.6
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 3.0e-06 55.8 102 37.3
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 4.0e-06 55.5 110 38.2
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 4.0e-06 55.5 109 34.9
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 5.2e-06 55.1 81 44.4
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 5.2e-06 55.1 110 34.5
Sed0023819 Sechium edule HOM05D007558 ORTHO05D009245 5.2e-06 55.1 101 43.6
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 8.9e-06 54.3 138 31.2


User provided reference genes

Program Settings