Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 1.1e-264 916.4 581 100.0
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 1.0e-177 627.5 641 58.2
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.7e-172 610.1 649 57.2
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 3.8e-172 609.0 634 56.9
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 1.6e-170 603.6 636 64.9
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 1.5e-168 597.0 643 61.7
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.0e-168 596.7 639 58.8
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 2.2e-167 593.2 665 57.0
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 8.2e-167 591.3 633 64.0
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 1.1e-166 590.9 632 59.3
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 7.7e-165 584.7 638 61.4
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.3e-164 583.9 638 61.4
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 2.2e-164 583.2 635 58.1
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 2.9e-164 582.8 638 60.7
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.8e-164 582.4 653 58.2
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 3.8e-164 582.4 633 67.0
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 5.0e-164 582.0 633 66.8
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.1e-163 580.9 642 59.7
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 3.2e-163 579.3 653 61.9
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 7.2e-163 578.2 681 53.6
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 9.4e-163 577.8 633 63.3
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 4.7e-162 575.5 654 58.6
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 6.1e-162 575.1 634 59.9
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 1.4e-161 573.9 632 54.1
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.4e-161 573.9 646 65.2
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.8e-161 573.5 636 57.9
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 4.0e-161 572.4 648 55.6
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.2e-160 570.9 646 59.6
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 1.5e-160 570.5 636 59.6
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 3.4e-160 569.3 669 56.2
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 9.8e-160 567.8 635 61.9
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 2.2e-159 566.6 655 57.9
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.4e-158 563.9 656 56.9
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.8e-158 563.5 633 60.8
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 7.0e-158 561.6 644 59.5
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 2.7e-157 559.7 645 56.4
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 5.9e-157 558.5 650 59.7
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 1.0e-156 557.8 650 53.5
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.0e-156 557.8 651 55.6
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.3e-156 557.4 639 59.0
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.3e-156 557.4 642 57.8
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 2.3e-156 556.6 679 56.1
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 5.0e-156 555.4 647 55.2
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 1.9e-155 553.5 642 53.9
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 9.5e-155 551.2 633 62.1
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 6.1e-154 548.5 636 61.0
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 1.0e-153 547.7 643 60.7
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 2.3e-153 546.6 645 60.0
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 2.3e-153 546.6 645 58.4
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 8.9e-153 544.7 637 53.4
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.4e-152 542.7 652 51.8
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 3.4e-152 542.7 645 58.6
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 1.1e-150 537.7 650 55.1
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 5.4e-150 535.4 650 53.2
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 5.4e-150 535.4 660 51.5
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-149 534.3 649 53.9
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 2.0e-149 533.5 646 53.9
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 5.9e-149 531.9 638 57.4
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 5.9e-149 531.9 638 57.7
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.3e-148 530.8 646 56.5
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 1.3e-148 530.8 645 56.3
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.3e-148 530.8 636 52.0
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 2.3e-148 530.0 634 56.9
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.6e-148 528.5 646 57.1
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 8.6e-148 528.1 657 53.0
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 2.5e-147 526.6 639 57.0
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 5.6e-147 525.4 663 54.1
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.2e-146 524.2 638 58.3
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.0e-145 519.2 651 54.7
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 5.2e-145 518.8 642 60.6
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 8.9e-145 518.1 643 52.7
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 3.4e-144 516.2 655 62.9
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.3e-140 503.4 668 53.0
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.3e-139 499.2 668 51.5
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 5.6e-139 498.8 663 54.3
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 7.3e-139 498.4 641 49.0
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 8.9e-137 491.5 649 51.2
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.4e-136 489.2 638 48.7
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 2.2e-135 486.9 660 50.2
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.4e-134 484.2 645 50.1
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 7.0e-134 481.9 559 63.7
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 6.0e-133 478.8 506 57.1
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 6.6e-132 475.3 664 46.4
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.5e-131 474.2 671 54.7
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 6.2e-130 468.8 666 45.5
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.1e-129 466.5 649 47.0
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 5.4e-126 455.7 595 51.1
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 8.6e-124 448.4 642 52.2
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.5e-123 446.8 647 50.5
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 5.6e-123 445.7 503 63.8
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 6.2e-122 442.2 644 52.5
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 8.1e-122 441.8 644 52.5
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 3.1e-121 439.9 644 50.0
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 4.0e-121 439.5 645 51.8
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.0e-121 439.5 610 47.9
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 4.4e-120 436.0 618 49.2
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 5.4e-118 429.1 636 46.2
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.1e-117 427.2 654 46.8
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 4.6e-117 426.0 647 48.1
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 7.8e-117 425.2 648 48.0
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.0e-116 423.3 597 48.6
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 3.3e-115 419.9 643 48.8
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 8.1e-114 415.2 651 50.2
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 1.1e-113 414.8 516 60.3
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 6.4e-111 405.6 438 66.0
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.2e-110 403.3 647 43.9
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.6e-109 401.0 510 51.4
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.1e-107 394.8 651 42.2
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.6e-106 391.0 721 46.9
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 4.9e-103 379.4 678 40.0
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 9.3e-102 375.2 668 46.0
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 9.3e-102 375.2 668 46.0
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.6e-101 372.9 494 55.9
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 1.9e-99 367.5 576 49.0
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 1.4e-94 351.3 629 38.6
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.5e-94 350.5 629 38.5
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 4.2e-94 349.7 629 38.8
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 5.6e-91 339.3 595 46.2
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 3.7e-90 336.7 568 43.7
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 1.0e-84 318.5 717 45.0
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.3e-79 301.6 278 60.8
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.9e-76 290.0 648 38.1
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 4.8e-74 283.1 255 59.2
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.8e-73 281.2 582 44.3
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 5.0e-71 273.1 300 54.3
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 1.3e-58 231.9 346 43.9
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 6.3e-58 229.6 651 38.4
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 2.4e-57 227.6 725 37.4
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 1.9e-54 218.0 630 32.1
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.2e-53 215.3 216 59.3
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.1e-53 214.5 406 56.9
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.8e-52 211.5 367 50.7
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 8.0e-45 186.0 180 63.9
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.4e-43 180.6 422 36.7
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.1e-38 165.6 306 33.3
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.6e-37 161.8 355 36.3
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 5.7e-35 153.3 246 39.8
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-32 145.2 316 38.3
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.3e-31 141.4 337 35.0
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.9e-25 121.7 120 50.8
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 1.9e-25 121.7 134 52.2
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 2.0e-24 118.2 163 44.2
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-22 112.5 143 49.7
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.9e-22 111.7 77 72.7
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 4.3e-22 110.5 93 58.1
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.1e-20 105.9 91 59.3
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 6.8e-20 103.2 125 52.0
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-17 95.5 113 49.6
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.1e-17 93.2 362 29.8
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-15 88.6 320 30.3
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.0e-15 87.8 118 45.8
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-14 85.5 543 22.7
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-13 81.6 126 45.2
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-12 79.0 137 42.3
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.8e-12 78.6 76 57.9
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 1.9e-09 68.6 51 78.4
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 3.2e-09 67.8 87 44.8
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-08 65.5 80 43.8
HPP92_006544 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-08 65.1 152 38.8
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 2.1e-08 65.1 40 75.0
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.7e-08 64.7 277 26.4
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.8e-08 63.2 131 36.6
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.7e-07 62.0 79 45.6
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 3.9e-07 60.8 100 37.0
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 5.1e-07 60.5 80 48.8
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.9e-06 58.5 56 55.4
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.3e-06 57.8 38 76.3
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 5.6e-06 57.0 41 75.6


User provided reference genes

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