Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6413 Utricularia gibba HOM05D003830 ORTHO05D004446 0.0e+00 1453.3 754 100.0
unitig_699.g19949 Utricularia gibba HOM05D003830 ORTHO05D004446 6.0e-93 346.3 884 35.4
SalBow2G2689 Salvia bowleyana HOM05D003830 ORTHO05D004446 1.3e-82 312.0 747 35.6
MSTRG.524 Avicennia marina HOM05D003830 ORTHO05D004446 3.6e-82 310.5 855 33.2
Migut.K00697 Erythranthe guttata HOM05D003830 ORTHO05D004446 2.6e-80 304.3 697 37.3
Oeu041685.1 Olea europaea HOM05D003830 ORTHO05D004446 3.9e-76 290.4 750 34.7
MSTRG.7981 Avicennia marina HOM05D003830 ORTHO05D004446 5.1e-76 290.0 883 31.5
Peaxi162Scf00128g00924 Petunia axillaris HOM05D003830 ORTHO05D004446 1.5e-75 288.5 722 36.4
Dinv14800 Davidia involucrata HOM05D003830 ORTHO05D004446 2.4e-73 281.2 765 34.1
Actinidia25761 Actinidia chinensis HOM05D003830 ORTHO05D004446 1.5e-72 278.5 743 33.8
Oeu038669.1 Olea europaea HOM05D003830 ORTHO05D004446 7.6e-72 276.2 759 35.2
Sopen05g009770 Solanum pennellii HOM05D003830 ORTHO05D004446 6.5e-71 273.1 737 35.1
Solyc05g014640.3 Solanum lycopersicum HOM05D003830 ORTHO05D004446 1.1e-70 272.3 736 35.3
Atru.chr11.2246 Acer truncatum HOM05D003830 ORTHO05D004446 1.6e-69 268.5 753 33.5
Atru.chr11.2261 Acer truncatum HOM05D003830 ORTHO05D004446 1.6e-69 268.5 753 33.5
CSS0000134 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 2.1e-69 268.1 767 32.6
Manes.12G014700 Manihot esculenta HOM05D003830 ORTHO05D004446 2.7e-69 267.7 779 31.7
CSS0032396 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 3.5e-69 267.3 739 33.4
Migut.E00239 Erythranthe guttata HOM05D003830 ORTHO05D004446 4.6e-69 266.9 668 36.7
Hma1.2p1_0167F.1_g073780 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 1.3e-68 265.4 753 32.7
CAN.G692.1 Capsicum annuum HOM05D003830 ORTHO05D004446 3.9e-68 263.8 738 33.7
PGSC0003DMG400017461 Solanum tuberosum HOM05D003830 ORTHO05D004446 8.7e-68 262.7 744 33.3
Cc11_g16600 Coffea canephora HOM05D003830 ORTHO05D004446 1.1e-67 262.3 744 34.3
Dinv10992 Davidia involucrata HOM05D003830 ORTHO05D004446 7.4e-67 259.6 767 32.3
Manes.13G015800 Manihot esculenta HOM05D003830 ORTHO05D004446 2.1e-66 258.1 766 32.4
GSVIVG01010345001 Vitis vinifera HOM05D003830 ORTHO05D004446 2.8e-66 257.7 766 32.6
QL03p054734 Quercus lobata HOM05D003830 ORTHO05D004446 3.7e-66 257.3 774 31.8
Ciclev10030548m.g Citrus clementina HOM05D003830 ORTHO05D004446 6.2e-66 256.5 774 32.6
Psat5g094600 Pisum sativum HOM05D003830 ORTHO05D004446 6.2e-66 256.5 709 34.4
TWI75G0226 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 2.4e-65 254.6 805 32.5
Eucgr.H04665 Eucalyptus grandis HOM05D003830 ORTHO05D004446 3.1e-65 254.2 747 34.7
Thecc.02G274300 Theobroma cacao HOM05D003830 ORTHO05D004446 4.1e-65 253.8 756 33.2
TPR.G22439 Trifolium pratense HOM05D003830 ORTHO05D004446 5.3e-65 253.4 752 34.2
CiPaw.05G115100 Carya illinoinensis HOM05D003830 ORTHO05D004446 1.2e-64 252.3 764 30.9
Glyma.11G248200 Glycine max HOM05D003830 ORTHO05D004446 2.0e-64 251.5 754 31.0
Glyma.18G009000 Glycine max HOM05D003830 ORTHO05D004446 3.4e-64 250.8 754 31.4
Ca_16482_v3 Cicer arietinum L. HOM05D003830 ORTHO05D004446 5.8e-64 250.0 764 31.9
DCAR_024085 Daucus carota HOM05D003830 ORTHO05D004446 1.0e-63 249.2 761 32.7
Lj6C822T9 Lonicera japonica HOM05D003830 ORTHO05D004446 1.0e-63 249.2 757 34.5
Gohir.D02G152400 Gossypium hirsutum HOM05D003830 ORTHO05D004446 1.3e-63 248.8 741 32.7
Prupe.1G233200 Prunus persica HOM05D003830 ORTHO05D004446 1.7e-63 248.4 778 31.6
Phvul.001G259600 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 2.9e-63 247.7 759 31.5
Rhsim12G0030500 Rhododendron simsii HOM05D003830 ORTHO05D004446 6.5e-63 246.5 786 31.2
Duzib268G1283 Durio zibethinus HOM05D003830 ORTHO05D004446 8.4e-63 246.1 715 35.4
TAR622G0818 Trochodendron aralioides HOM05D003830 ORTHO05D004446 8.4e-63 246.1 760 30.9
Duzib248G1684 Durio zibethinus HOM05D003830 ORTHO05D004446 1.4e-62 245.4 755 32.2
Gohir.A03G128600 Gossypium hirsutum HOM05D003830 ORTHO05D004446 1.9e-62 245.0 749 32.2
Gorai.005G171400 Gossypium raimondii HOM05D003830 ORTHO05D004446 1.9e-62 245.0 749 32.2
unitig_747.g21131 Utricularia gibba HOM05D003830 ORTHO05D004446 2.5e-62 244.6 813 31.6
COL.COLO4_23621 Corchorus olitorius HOM05D003830 ORTHO05D004446 3.2e-62 244.2 755 33.0
Rhsim12G0031400 Rhododendron simsii HOM05D003830 ORTHO05D004446 4.2e-62 243.8 786 31.0
TAR374G0580 Trochodendron aralioides HOM05D003830 ORTHO05D004446 2.1e-61 241.5 759 30.6
Cfa009315 Carpinus fangiana HOM05D003830 ORTHO05D008363 3.5e-61 240.7 772 31.3
VMungo1383G3029 Vigna mungo HOM05D003830 ORTHO05D004446 7.9e-61 239.6 753 32.1
Phvul.002G176100 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 1.0e-60 239.2 767 31.2
EL10Ac6g13438 Beta vulgaris HOM05D003830 ORTHO05D004446 2.3e-60 238.0 745 31.8
Sabra10G0048900 Salix brachista HOM05D003830 ORTHO05D004446 3.0e-60 237.7 808 30.3
arahy.Tifrunner.gnm1.ann1.D6D033 Arachis hypogaea HOM05D003830 ORTHO05D004446 6.7e-60 236.5 793 30.5
Lalb_Chr23g0277961 Lupinus albus HOM05D003830 ORTHO05D004446 6.7e-60 236.5 726 31.4
Nitab4.5_0000240g0070 Nicotiana tabacum HOM05D003830 ORTHO05D004446 6.7e-60 236.5 707 35.1
vmacro01085 Vaccinium macrocarpon HOM05D003830 ORTHO05D004446 6.7e-60 236.5 820 30.9
Aqoxy3G01454 Aquilegia oxysepala HOM05D003830 ORTHO05D004446 8.7e-60 236.1 788 32.2
SalBow8G5205 Salvia bowleyana HOM05D003830 ORTHO05D004446 1.1e-59 235.7 725 32.0
Lalb_Chr08g0230701 Lupinus albus HOM05D003830 ORTHO05D004446 1.5e-59 235.3 747 31.9
Sc11g0000660 Simmondsia chinensis HOM05D003830 ORTHO05D004446 5.7e-59 233.4 724 34.1
TWI18G0501 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 5.7e-59 233.4 772 31.5
Lj4g0001101 Lotus japonicus HOM05D003830 ORTHO05D004446 2.8e-58 231.1 770 31.7
TAR629G0808 Trochodendron aralioides HOM05D003830 ORTHO05D004446 2.8e-58 231.1 762 31.2
Potri.010G056200 Populus trichocarpa HOM05D003830 ORTHO05D004446 4.8e-58 230.3 800 30.0
Sabra08G0136300 Salix brachista HOM05D003830 ORTHO05D004446 4.8e-58 230.3 777 30.1
SGA_v2.0_scaffold391G50642 Striga asiatica HOM05D003830 ORTHO05D004446 8.2e-58 229.6 644 33.9
Oeu056685.2 Olea europaea HOM05D003830 ORTHO05D004446 1.1e-57 229.2 826 30.0
arahy.Tifrunner.gnm1.ann1.ZS76EK Arachis hypogaea HOM05D003830 ORTHO05D004446 1.4e-57 228.8 799 29.8
Nn4g22404 Nelumbo nucifera HOM05D003830 ORTHO05D004446 4.1e-57 227.3 808 30.2
Potri.008G178600 Populus trichocarpa HOM05D003830 ORTHO05D004446 4.1e-57 227.3 762 29.5
ECA234G2423 Erigeron canadensis HOM05D003830 ORTHO05D004446 5.3e-57 226.9 733 31.4
VMungo0251G0774 Vigna mungo HOM05D003830 ORTHO05D004446 9.0e-57 226.1 766 31.1
AUR62024159 Chenopodium quinoa HOM05D003830 ORTHO05D004446 5.9e-56 223.4 734 30.9
TWI36G0084 Tripterygium wilfordii HOM05D003830 ORTHO05D004446 7.7e-56 223.0 956 29.7
CsaV3_2G025330 Cucumis sativus L. HOM05D003830 ORTHO05D004446 3.8e-55 220.7 775 31.6
MD13G1112200 Malus domestica HOM05D003830 ORTHO05D004446 3.8e-55 220.7 800 28.8
FvH4_4g24320 Fragaria vesca HOM05D003830 ORTHO05D004446 1.1e-54 219.2 788 30.1
Nitab4.5_0011772g0020 Nicotiana tabacum HOM05D003830 ORTHO05D004446 1.1e-54 219.2 738 31.7
FAN17G1537 Fragaria x ananassa HOM05D003830 ORTHO05D004446 1.9e-54 218.4 788 30.3
Lsat_1_v5_gn_8_150260 Lactuca sativa HOM05D003830 ORTHO05D004446 1.9e-54 218.4 684 30.4
RcHm_v2.0_Chr4g0431121 Rosa chinensis HOM05D003830 ORTHO05D004446 1.9e-54 218.4 778 29.9
Sed0027794 Sechium edule HOM05D003830 ORTHO05D004446 3.2e-54 217.6 808 30.7
MD16G1111800 Malus domestica HOM05D003830 ORTHO05D004446 4.2e-54 217.2 781 28.9
AUR62005571 Chenopodium quinoa HOM05D003830 ORTHO05D004446 7.2e-54 216.5 732 31.1
Nn3g16538 Nelumbo nucifera HOM05D003830 ORTHO05D004446 7.2e-54 216.5 470 36.8
ClCG08G017300 Citrullus lanatus HOM05D003830 ORTHO05D004446 1.6e-53 215.3 815 29.2
PSO063G3359 Papaver somniferum HOM05D003830 ORTHO05D004446 2.1e-53 214.9 732 29.8
FAN12G3820 Fragaria x ananassa HOM05D003830 ORTHO05D004446 2.7e-53 214.5 788 29.8
FAN22G2024 Fragaria x ananassa HOM05D003830 ORTHO05D004446 2.7e-53 214.5 784 30.5
PSO782G2541 Papaver somniferum HOM05D003830 ORTHO05D004446 4.6e-53 213.8 732 29.5
HanXRQChr08g0207491 Helianthus annuus HOM05D003830 ORTHO05D004446 1.5e-51 208.8 719 30.6
HanXRQChr17g0569161 Helianthus annuus HOM05D003830 ORTHO05D004446 2.5e-51 208.0 738 30.2
PGR102G1232 Punica granatum HOM05D003830 ORTHO05D004446 2.2e-50 204.9 830 30.1
Glyma.08G102200 Glycine max HOM05D003830 ORTHO05D004446 2.8e-50 204.5 765 29.5
MELO3C010729.2 Cucumis melo HOM05D003830 ORTHO05D004446 6.3e-50 203.4 773 30.8
ECA233G0646 Erigeron canadensis HOM05D003830 ORTHO05D004446 6.3e-50 203.4 743 29.5
Duzib251G0504 Durio zibethinus HOM05D003830 ORTHO05D004446 1.4e-49 202.2 667 31.2
Aa31sc109G20 Aethionema arabicum HOM05D003830 ORTHO05D004446 3.1e-49 201.1 751 29.8
CARHR027310 Cardamine hirsuta HOM05D003830 ORTHO05D004446 1.2e-48 199.1 448 37.3
CANSAT01G2001 Cannabis sativa HOM05D003830 ORTHO05D004446 2.9e-47 194.5 803 29.0
BcaC05g26779 Brassica carinata HOM05D003830 ORTHO05D004446 1.9e-46 191.8 418 37.8
AT1G27850 Arabidopsis thaliana HOM05D003830 ORTHO05D004446 3.2e-46 191.0 438 36.8
AL1G41340 Arabidopsis lyrata HOM05D003830 ORTHO05D004446 5.5e-46 190.3 438 36.8
Hma1.2p1_1340F.1_g276740 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 7.2e-46 189.9 375 40.3
Sp1g24060 Schrenkiella parvula HOM05D003830 ORTHO05D004446 2.1e-45 188.3 414 37.0
BraA08t34553Z Brassica rapa HOM05D003830 ORTHO05D004446 3.6e-45 187.6 704 30.7
THA.LOC104825519 Tarenaya hassleriana HOM05D003830 ORTHO05D004446 4.7e-45 187.2 747 28.1
A08p26030 Brassica napus HOM05D003830 ORTHO05D004446 5.1e-44 183.7 786 29.0
BraA09t39341Z Brassica rapa HOM05D003830 ORTHO05D004446 5.1e-44 183.7 751 29.4
Carub.0001s2631 Capsella rubella HOM05D003830 ORTHO05D004446 6.7e-44 183.3 454 35.9
Thhalv10006616m.g Eutrema salsugineum HOM05D003830 ORTHO05D004446 6.7e-44 183.3 431 36.9
BolC5t31369H Brassica oleracea HOM05D003830 ORTHO05D004446 1.7e-42 178.7 841 28.3
DCAR_007014 Daucus carota HOM05D003830 ORTHO05D004446 2.8e-42 177.9 728 30.1
C03p74620 Brassica napus HOM05D003830 ORTHO05D004446 8.2e-42 176.4 564 31.2
BolC3t19710H Brassica oleracea HOM05D003830 ORTHO05D004446 4.1e-41 174.1 685 31.8
ATR0609G075 Amborella trichopoda HOM05D003830 ORTHO05D004446 7.0e-41 173.3 778 28.0
Cpa.g.c26951.1 Carica papaya HOM05D003830 ORTHO05D004446 7.0e-41 173.3 618 29.6
C05p26490 Brassica napus HOM05D003830 ORTHO05D004446 7.7e-40 169.9 864 27.3
Actinidia33257 Actinidia chinensis HOM05D003830 ORTHO05D004446 1.5e-38 165.6 648 28.9
A09p38310 Brassica napus HOM05D003830 ORTHO05D004446 4.2e-38 164.1 888 27.6
arahy.Tifrunner.gnm1.ann1.MTFP9U Arachis hypogaea HOM05D003830 ORTHO05D004446 2.1e-37 161.8 734 28.5
Hund06065 Selenicereus undatus HOM05D003830 ORTHO05D004446 2.3e-36 158.3 626 30.0
Zm00001eb133500 Zea mays HOM05D003830 ORTHO05D004446 6.7e-36 156.8 546 30.0
Lalb_Chr11g0075691 Lupinus albus HOM05D003830 ORTHO05D004446 5.7e-35 153.7 387 38.5
arahy.Tifrunner.gnm1.ann1.JB8DT0 Arachis hypogaea HOM05D003830 ORTHO05D004446 7.5e-35 153.3 723 27.9
SGA_v2.0_scaffold87G27127 Striga asiatica HOM05D003830 ORTHO05D004446 9.7e-35 152.9 443 33.6
MBI08_g41743_MAGBIO Magnolia biondii HOM05D003830 ORTHO05D004446 1.1e-33 149.4 459 31.6
Actinidia30674 Actinidia chinensis HOM05D003830 ORTHO05D004446 1.2e-32 146.0 368 34.5
CDE04G3030 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 1.6e-32 145.6 344 34.6
CDE07G1392 Ceratophyllum demersum HOM05D003830 ORTHO05D004446 3.6e-29 134.4 291 39.2
Lsat_1_v5_gn_4_2860 Lactuca sativa HOM05D003830 ORTHO05D004446 4.7e-29 134.0 622 27.7
Os12g0239000 Oryza sativa ssp. japonica HOM05D003830 ORTHO05D004446 1.5e-27 129.0 439 29.4
Os12g0239200 Oryza sativa ssp. japonica HOM05D003830 ORTHO05D004446 3.7e-26 124.4 465 29.7
HPP92_004598 Vanilla planifolia HOM05D003830 ORTHO05D004446 2.2e-23 115.2 453 30.9
PSO063G5558 Papaver somniferum HOM05D003830 ORTHO05D004446 1.2e-21 109.4 271 37.6
SHI17938 Sapria himalayana HOM05D003830 ORTHO05D004446 2.3e-20 105.1 391 32.2
Glyma.05G145400 Glycine max HOM05D003830 ORTHO05D004446 7.5e-19 100.1 444 26.8
Zm00001eb409890 Zea mays HOM05D003830 ORTHO05D004446 7.5e-19 100.1 526 28.9
SEGI_06277 Sequoiadendron giganteum HOM05D003830 ORTHO05D004446 3.5e-16 91.3 252 31.0
CSS0021953 Camellia sinensis var. sinensis HOM05D003830 ORTHO05D004446 8.0e-13 80.1 174 37.4
HPP92_006184 Vanilla planifolia HOM05D003830 ORTHO05D004446 3.0e-12 78.2 415 26.7
Hma1.2p1_1340F.1_g276750 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 1.7e-10 72.4 289 27.3
Mapoly0001s0565 Marchantia polymorpha HOM05D003830 ORTHO05D004446 6.4e-10 70.5 206 31.1
Cpa.g.c44110 Carica papaya HOM05D003830 ORTHO05D004446 8.3e-10 70.1 151 36.4
Phvul.002G093600 Phaseolus vulgaris HOM05D003830 ORTHO05D004446 1.8e-09 68.9 149 33.6
MBI07_g42070_MAGBIO Magnolia biondii HOM05D007981 ORTHO05D001345 3.0e-07 61.6 277 26.0
EL10Ac2g04813 Beta vulgaris HOM05D001930 ORTHO05D001345 8.6e-07 60.1 151 33.8
unitig_747.g21132 Utricularia gibba HOM05D003830 ORTHO05D004446 1.1e-06 59.7 73 47.9


User provided reference genes

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