Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6372 Utricularia gibba HOM05D005483 ORTHO05D006924 1.0e-199 699.9 362 100.0
MSTRG.445 Avicennia marina HOM05D005483 ORTHO05D006924 2.8e-120 436.0 316 72.8
Migut.K01044 Erythranthe guttata HOM05D005483 ORTHO05D006924 4.9e-117 425.2 316 71.8
SalBow2G2141 Salvia bowleyana HOM05D005483 ORTHO05D006924 4.6e-115 418.7 316 72.8
MSTRG.8060 Avicennia marina HOM05D005483 ORTHO05D006924 1.7e-114 416.8 320 72.8
SGA_v2.0_scaffold258G45771 Striga asiatica HOM05D005483 ORTHO05D006924 2.3e-114 416.4 315 71.4
Lsat_1_v5_gn_3_32540 Lactuca sativa HOM05D005483 ORTHO05D006924 3.2e-108 396.0 323 67.2
Cc11_g14910 Coffea canephora HOM05D005483 ORTHO05D006924 5.4e-108 395.2 318 66.7
COL.COLO4_08434 Corchorus olitorius HOM05D005483 ORTHO05D006924 3.3e-105 386.0 321 65.7
Nitab4.5_0002569g0090 Nicotiana tabacum HOM05D005483 ORTHO05D006924 2.8e-104 382.9 314 66.2
PGR119G2201 Punica granatum HOM05D005483 ORTHO05D006924 6.2e-104 381.7 316 65.8
CANSAT01G1825 Cannabis sativa HOM05D005483 ORTHO05D006924 1.8e-103 380.2 321 63.6
Gohir.A01G020200 Gossypium hirsutum HOM05D005483 ORTHO05D006924 2.3e-103 379.8 320 64.7
Thecc.02G190700 Theobroma cacao HOM05D005483 ORTHO05D006924 2.3e-103 379.8 320 64.7
Manes.08G100200 Manihot esculenta HOM05D005483 ORTHO05D006924 4.0e-103 379.0 314 65.6
HanXRQChr17g0540341 Helianthus annuus HOM05D005483 ORTHO05D006924 6.8e-103 378.3 314 64.6
Dinv17529 Davidia involucrata HOM05D005483 ORTHO05D006924 8.9e-103 377.9 319 63.3
Gohir.D01G018800 Gossypium hirsutum HOM05D005483 ORTHO05D006924 8.9e-103 377.9 320 64.1
Gorai.002G021000 Gossypium raimondii HOM05D005483 ORTHO05D006924 1.2e-102 377.5 320 64.4
TAR622G1101 Trochodendron aralioides HOM05D005483 ORTHO05D006924 1.2e-102 377.5 336 63.1
Solyc11g033282.1 Solanum lycopersicum HOM05D005483 ORTHO05D006924 2.0e-102 376.7 314 65.6
Sopen11g017110 Solanum pennellii HOM05D005483 ORTHO05D006924 2.0e-102 376.7 314 65.6
Ciclev10004203m.g Citrus clementina HOM05D005483 ORTHO05D006924 2.6e-102 376.3 314 65.3
GSVIVG01001111001 Vitis vinifera HOM05D005483 ORTHO05D006924 4.4e-102 375.6 317 65.6
Atru.chr12.1443 Acer truncatum HOM05D005483 ORTHO05D006924 1.3e-101 374.0 318 64.8
Duzib248G1306 Durio zibethinus HOM05D005483 ORTHO05D006924 1.3e-101 374.0 325 63.1
Hma1.2p1_1494F.1_g286880 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 1.7e-101 373.6 318 65.1
Hma1.2p1_1494F.1_g286890 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 2.2e-101 373.2 314 65.6
Peaxi162Scf00842g00430 Petunia axillaris HOM05D005483 ORTHO05D006924 2.9e-101 372.9 314 63.7
ECA246G4063 Erigeron canadensis HOM05D005483 ORTHO05D006924 8.4e-101 371.3 314 62.1
Cpa.g.sc38.68 Carica papaya HOM05D005483 ORTHO05D006924 2.4e-100 369.8 316 64.6
Potri.001G068900 Populus trichocarpa HOM05D005483 ORTHO05D006924 4.1e-100 369.0 314 62.1
Actinidia30577 Actinidia chinensis HOM05D005483 ORTHO05D006924 1.6e-99 367.1 314 64.6
ClCG07G012020 Citrullus lanatus HOM05D005483 ORTHO05D006924 4.6e-99 365.5 317 62.8
Sed0020947 Sechium edule HOM05D005483 ORTHO05D006924 4.6e-99 365.5 318 62.6
MELO3C017824.2 Cucumis melo HOM05D005483 ORTHO05D006924 1.7e-98 363.6 316 63.0
Sabra03G0117300 Salix brachista HOM05D005483 ORTHO05D006924 3.0e-98 362.8 317 60.9
CSS0020507 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 3.9e-98 362.5 325 63.1
Prupe.1G213300 Prunus persica HOM05D005483 ORTHO05D006924 1.1e-97 360.9 316 62.7
CsaV3_4G002140 Cucumis sativus L. HOM05D005483 ORTHO05D006924 1.5e-97 360.5 316 62.3
Duzib052G0599 Durio zibethinus HOM05D005483 ORTHO05D006924 1.5e-97 360.5 318 62.6
MD16G1142500 Malus domestica HOM05D005483 ORTHO05D006924 2.5e-97 359.8 316 63.0
Nn4g22102 Nelumbo nucifera HOM05D005483 ORTHO05D006924 2.5e-97 359.8 323 62.5
HanXRQChr06g0175451 Helianthus annuus HOM05D005483 ORTHO05D006924 3.3e-97 359.4 314 62.1
QL03p048748 Quercus lobata HOM05D005483 ORTHO05D006924 3.3e-97 359.4 320 62.5
TWI18G1022 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 3.3e-97 359.4 318 60.4
Aa31LG3G14260 Aethionema arabicum HOM05D005483 ORTHO05D006924 7.3e-97 358.2 321 59.8
FAN07G1779 Fragaria x ananassa HOM05D005483 ORTHO05D006924 1.2e-96 357.5 316 62.7
FAN17G2071 Fragaria x ananassa HOM05D005483 ORTHO05D006924 1.2e-96 357.5 316 62.7
AT5G13390 Arabidopsis thaliana HOM05D005483 ORTHO05D006924 2.1e-96 356.7 316 60.1
Thhalv10012499m.g Eutrema salsugineum HOM05D005483 ORTHO05D006924 4.7e-96 355.5 317 61.2
Haze_12514 Corylus avellana HOM05D005483 ORTHO05D006924 6.2e-96 355.1 320 62.5
MD13G1132200 Malus domestica HOM05D005483 ORTHO05D006924 6.2e-96 355.1 316 62.3
FvH4_4g22440 Fragaria vesca HOM05D005483 ORTHO05D006924 1.1e-95 354.4 316 62.0
FAN12G1583 Fragaria x ananassa HOM05D005483 ORTHO05D006924 1.1e-95 354.4 316 62.0
Potri.003G161400 Populus trichocarpa HOM05D005483 ORTHO05D006924 1.4e-95 354.0 314 59.6
Sed0017746 Sechium edule HOM05D005483 ORTHO05D006924 1.8e-95 353.6 317 61.5
THA.LOC104825454 Tarenaya hassleriana HOM05D005483 ORTHO05D006924 1.8e-95 353.6 316 60.1
AL6G24010 Arabidopsis lyrata HOM05D005483 ORTHO05D006924 2.4e-95 353.2 316 59.8
Cfa009459 Carpinus fangiana HOM05D005483 ORTHO05D006924 2.4e-95 353.2 317 62.1
Carub.0006s1155 Capsella rubella HOM05D005483 ORTHO05D006924 4.0e-95 352.4 316 60.1
RcHm_v2.0_Chr4g0428701 Rosa chinensis HOM05D005483 ORTHO05D006924 6.9e-95 351.7 316 61.1
Sp6g30630 Schrenkiella parvula HOM05D005483 ORTHO05D006924 1.2e-94 350.9 316 60.1
A10p24830 Brassica napus HOM05D005483 ORTHO05D006924 1.5e-94 350.5 316 60.8
BraA10t44547Z Brassica rapa HOM05D005483 ORTHO05D006924 3.4e-94 349.4 316 60.4
BolC9t59209H Brassica oleracea HOM05D005483 ORTHO05D006924 4.4e-94 349.0 316 60.4
vmacro01010 Vaccinium macrocarpon HOM05D005483 ORTHO05D006924 2.2e-93 346.7 319 59.9
C09p63680 Brassica napus HOM05D005483 ORTHO05D006924 6.4e-93 345.1 316 60.1
DCAR_026440 Daucus carota HOM05D005483 ORTHO05D006924 8.4e-93 344.7 327 61.8
TWI36G1286 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 7.1e-92 341.7 322 58.7
Sc11g0000050 Simmondsia chinensis HOM05D005483 ORTHO05D006924 1.6e-91 340.5 316 61.1
Nn3g16247 Nelumbo nucifera HOM05D005483 ORTHO05D006924 2.1e-91 340.1 318 58.5
PSO017G1761 Papaver somniferum HOM05D005483 ORTHO05D006924 2.7e-91 339.7 318 61.0
PSO478G1749 Papaver somniferum HOM05D005483 ORTHO05D006924 1.0e-90 337.8 319 60.8
BcaNung01159 Brassica carinata HOM05D005483 ORTHO05D006924 1.3e-90 337.4 316 57.3
Rhsim12G0016200 Rhododendron simsii HOM05D005483 ORTHO05D006924 1.3e-90 337.4 317 59.3
BolC2t06551H Brassica oleracea HOM05D005483 ORTHO05D006924 1.7e-90 337.0 317 58.0
Aqoxy5G03055 Aquilegia oxysepala HOM05D005483 ORTHO05D006924 6.6e-90 335.1 317 61.8
CiPaw.06G110300 Carya illinoinensis HOM05D005483 ORTHO05D006924 1.9e-89 333.6 316 60.8
CARHR200040 Cardamine hirsuta HOM05D005483 ORTHO05D006924 3.3e-89 332.8 316 58.2
BcaNung01880 Brassica carinata HOM05D005483 ORTHO05D006924 2.1e-88 330.1 250 66.0
BraA02t05161Z Brassica rapa HOM05D005483 ORTHO05D006924 2.8e-88 329.7 317 58.0
CSS0027672 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 3.6e-88 329.3 285 64.6
A02p01880 Brassica napus HOM05D005483 ORTHO05D006924 1.4e-87 327.4 317 57.7
C02p06100 Brassica napus HOM05D005483 ORTHO05D006924 2.4e-87 326.6 246 66.3
Ah.03g135500 Amaranthus hybridus HOM05D005483 ORTHO05D006924 2.2e-85 320.1 317 58.7
AUR62028835 Chenopodium quinoa HOM05D005483 ORTHO05D006924 7.1e-84 315.1 293 60.1
Lj1g0002578 Lotus japonicus HOM05D005483 ORTHO05D006924 2.1e-83 313.5 319 58.6
Glyma.08G363300 Glycine max HOM05D005483 ORTHO05D006924 2.3e-82 310.1 317 57.7
CDE05G0204 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 1.9e-81 307.0 281 59.1
Phvul.008G003900 Phaseolus vulgaris HOM05D005483 ORTHO05D006924 1.9e-81 307.0 249 64.7
CDE05G1761 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 3.3e-81 306.2 305 56.4
VMungo1383G1684 Vigna mungo HOM05D005483 ORTHO05D006924 2.8e-80 303.1 317 56.5
BcaC04g19119 Brassica carinata HOM05D005483 ORTHO05D006924 1.4e-79 300.8 317 53.6
EL10Ac2g02397 Beta vulgaris HOM05D005483 ORTHO05D006924 6.9e-79 298.5 254 62.6
Glyma.18G298700 Glycine max HOM05D005483 ORTHO05D006924 1.2e-78 297.7 317 55.5
Sabra01G0048200 Salix brachista HOM05D005483 ORTHO05D006924 1.7e-77 293.9 210 67.6
TPR.G9702 Trifolium pratense HOM05D005483 ORTHO05D006924 5.5e-76 288.9 249 61.4
Lalb_Chr10g0091131 Lupinus albus HOM05D005483 ORTHO05D006924 1.2e-75 287.7 317 52.1
HPP92_020112 Vanilla planifolia HOM05D005483 ORTHO05D006924 1.4e-71 274.2 315 53.0
arahy.Tifrunner.gnm1.ann1.H63XD7 Arachis hypogaea HOM05D005483 ORTHO05D006924 2.9e-69 266.5 318 50.0
arahy.Tifrunner.gnm1.ann1.N4LA1V Arachis hypogaea HOM05D005483 ORTHO05D006924 2.9e-69 266.5 318 50.0
Ca_04087_v3 Cicer arietinum L. HOM05D005483 ORTHO05D006924 6.0e-67 258.8 249 55.4
Zm00001eb113290 Zea mays HOM05D005483 ORTHO05D006924 2.3e-66 256.9 266 56.4
SEGI_17725 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 8.7e-66 255.0 301 50.2
Psat3g206760 Pisum sativum HOM05D005483 ORTHO05D006924 4.3e-65 252.7 213 62.9
MBI11_g02503_MAGBIO Magnolia biondii HOM05D005483 ORTHO05D006924 1.6e-64 250.8 310 50.6
AUR62005722 Chenopodium quinoa HOM05D005483 ORTHO05D006924 5.0e-61 239.2 291 48.8
ATR0582G070 Amborella trichopoda HOM05D005483 ORTHO05D006924 2.5e-57 226.9 245 49.4
Mapoly0029s0137 Marchantia polymorpha HOM05D005483 ORTHO05D006924 2.5e-57 226.9 267 47.2
AagrBONN_evm.TU.Sc2ySwM_228.3500 Anthoceros agrestis HOM05D005483 ORTHO05D006924 9.7e-57 224.9 247 49.8
SMO116G0229 Selaginella moellendorffii HOM05D005483 ORTHO05D006924 1.1e-55 221.5 249 50.2
Pp3c14_23090 Physcomitrium patens HOM05D005483 ORTHO05D006924 2.4e-55 220.3 289 44.3
Medtr7g006760 Medicago truncatula HOM05D005483 ORTHO05D006924 1.8e-47 194.1 249 43.8
CBR_g38877 Chara braunii HOM05D005483 ORTHO05D006924 1.4e-42 177.9 269 40.1
Eucgr.G01983 Eucalyptus grandis HOM05D005483 ORTHO05D006924 5.3e-39 166.0 103 75.7
Lj6C839G6 Lonicera japonica HOM05D005483 ORTHO05D006924 2.6e-38 163.7 100 73.0
Lj6C839G5 Lonicera japonica HOM05D005483 ORTHO05D006924 1.2e-30 138.3 155 56.1
Actinidia22108 Actinidia chinensis HOM05D005483 ORTHO05D006924 1.5e-28 131.3 176 50.6
SGA_v2.0_scaffold98G29280 Striga asiatica HOM05D005483 ORTHO05D007482 2.3e-21 107.5 219 37.4
MCO16G196 Micromonas commoda HOM05D005483 ORTHO05D006924 2.5e-20 104.0 243 28.8
Medtr7g406760 Medicago truncatula HOM05D005483 ORTHO05D006924 9.8e-17 92.0 69 60.9
TAR374G0614 Trochodendron aralioides HOM05D005483 ORTHO05D006924 2.2e-16 90.9 65 66.2
Cre01.g018050 Chlamydomonas reinhardtii HOM05D005483 ORTHO05D006924 9.5e-12 75.5 258 27.5


User provided reference genes

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