Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6365 Utricularia gibba HOM05D004639 ORTHO05D005201 3.5e-38 161.0 74 100.0
Migut.A01100 Erythranthe guttata HOM05D004639 ORTHO05D005201 7.9e-14 80.1 46 71.7
SGA_v2.0_scaffold291G47333 Striga asiatica HOM05D004639 ORTHO05D005201 4.3e-12 74.3 42 73.8
SalBow6G0181 Salvia bowleyana HOM05D004639 ORTHO05D005201 1.6e-11 72.4 40 75.0
SalBow6G5700 Salvia bowleyana HOM05D004639 ORTHO05D005201 1.6e-11 72.4 40 75.0
PSO384G4518 Papaver somniferum HOM05D004639 ORTHO05D005201 2.8e-11 71.6 43 67.4
PSO493G0020 Papaver somniferum HOM05D004639 ORTHO05D005201 2.8e-11 71.6 43 67.4
Dinv01634 Davidia involucrata HOM05D004639 ORTHO05D005201 4.8e-11 70.9 62 58.1
Dinv08242 Davidia involucrata HOM05D004639 ORTHO05D005201 4.8e-11 70.9 62 58.1
MSTRG.8994 Avicennia marina HOM05D004639 ORTHO05D005201 2.4e-10 68.6 32 84.4
Oeu061992.1 Olea europaea HOM05D004639 ORTHO05D005201 2.4e-10 68.6 32 84.4
TAR376G0371 Trochodendron aralioides HOM05D004639 ORTHO05D005201 3.1e-10 68.2 35 77.1
Solyc02g021100.3 Solanum lycopersicum HOM05D004639 ORTHO05D005201 6.9e-10 67.0 35 77.1
MBI03_g13041_MAGBIO Magnolia biondii HOM05D004639 ORTHO05D005201 9.0e-10 66.6 33 78.8
Actinidia23035 Actinidia chinensis HOM05D004639 ORTHO05D005201 1.2e-09 66.2 35 71.4
arahy.Tifrunner.gnm1.ann1.CP937L Arachis hypogaea HOM05D004639 ORTHO05D005201 1.2e-09 66.2 43 62.8
arahy.Tifrunner.gnm1.ann1.GWL1KB Arachis hypogaea HOM05D004639 ORTHO05D005201 1.2e-09 66.2 43 62.8
CAN.G989.2 Capsicum annuum HOM05D004639 ORTHO05D005201 1.2e-09 66.2 41 68.3
Sopen02g005400 Solanum pennellii HOM05D004639 ORTHO05D005201 1.2e-09 66.2 35 77.1
Nn5g27169 Nelumbo nucifera HOM05D004639 ORTHO05D005201 2.0e-09 65.5 32 78.1
Aqoxy4G01839 Aquilegia oxysepala HOM05D004639 ORTHO05D005201 2.6e-09 65.1 32 78.1
Nitab4.5_0010824g0010 Nicotiana tabacum HOM05D004639 ORTHO05D005201 3.4e-09 64.7 39 66.7
Ciclev10028470m.g Citrus clementina HOM05D004639 ORTHO05D005201 4.5e-09 64.3 32 81.2
Lj2g0020909 Lotus japonicus HOM05D004639 ORTHO05D005201 4.5e-09 64.3 32 81.2
Potri.012G037700 Populus trichocarpa HOM05D004639 ORTHO05D005201 4.5e-09 64.3 32 78.1
Sabra12G0026100 Salix brachista HOM05D004639 ORTHO05D005201 4.5e-09 64.3 32 78.1
CANSAT64G1383 Cannabis sativa HOM05D004639 ORTHO05D005201 5.8e-09 63.9 33 78.8
CANSAT64G2443 Cannabis sativa HOM05D004639 ORTHO05D005201 5.8e-09 63.9 33 78.8
Peaxi162Scf00331g00311 Petunia axillaris HOM05D004639 ORTHO05D005201 5.8e-09 63.9 39 64.1
CSS0047186 Camellia sinensis var. sinensis HOM05D004639 ORTHO05D005201 7.6e-09 63.5 55 54.5
CDE02G2478 Ceratophyllum demersum HOM05D004639 ORTHO05D005201 7.6e-09 63.5 43 62.8
Prupe.4G286600 Prunus persica HOM05D004639 ORTHO05D005201 7.6e-09 63.5 57 56.1
BcaC08g44553 Brassica carinata HOM05D004639 ORTHO05D005201 1.0e-08 63.2 36 72.2
A07p00740 Brassica napus HOM05D004639 ORTHO05D005201 1.0e-08 63.2 36 72.2
C06p20180 Brassica napus HOM05D004639 ORTHO05D005201 1.0e-08 63.2 36 72.2
C07p01740 Brassica napus HOM05D004639 ORTHO05D005201 1.0e-08 63.2 36 72.2
BolC6t37199H Brassica oleracea HOM05D004639 ORTHO05D005201 1.0e-08 63.2 36 72.2
BolC7t40577H Brassica oleracea HOM05D004639 ORTHO05D005201 1.0e-08 63.2 36 72.2
BraA07t27872Z Brassica rapa HOM05D004639 ORTHO05D005201 1.0e-08 63.2 36 72.2
Cpa.g.sc15.68 Carica papaya HOM05D004639 ORTHO05D005201 1.0e-08 63.2 32 78.1
Thhalv10020704m.g Eutrema salsugineum HOM05D004639 ORTHO05D005201 1.0e-08 63.2 61 49.2
TPR.G9531 Trifolium pratense HOM05D004639 ORTHO05D005201 1.0e-08 63.2 57 57.9
DCAR_016067 Daucus carota HOM05D004639 ORTHO05D005201 1.3e-08 62.8 60 51.7
MD00G1164900 Malus domestica HOM05D004639 ORTHO05D005201 1.7e-08 62.4 32 75.0
Potri.014G187000 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.2e-08 62.0 57 52.6
Potri.014G187300 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
Potri.014G187766 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
Potri.014G189400 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
QL01p053168 Quercus lobata HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 78.1
Sabra19G0060200 Salix brachista HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
Sabra19G0060300 Salix brachista HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
Sabra19G0060700 Salix brachista HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
Sabra19G0060900 Salix brachista HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
Sabra19G0061000 Salix brachista HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
SabraUnG0000100 Salix brachista HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
SabraUnG0000200 Salix brachista HOM05D004639 ORTHO05D005201 2.2e-08 62.0 32 75.0
Sp3g06840 Schrenkiella parvula HOM05D004639 ORTHO05D005201 2.2e-08 62.0 36 69.4
CBR_g51322 Chara braunii HOM05D004639 ORTHO05D005201 2.9e-08 61.6 41 56.1
Cc00_g06760 Coffea canephora HOM05D004639 ORTHO05D005201 2.9e-08 61.6 37 67.6
Hma1.2p1_1077F.1_g254710 Hydrangea macrophylla HOM05D004639 ORTHO05D005201 2.9e-08 61.6 32 78.1
QL01p052883 Quercus lobata HOM05D011240 ORTHO05D005201 2.9e-08 61.6 32 78.1
Aa31LG5G18470 Aethionema arabicum HOM05D004639 ORTHO05D005201 3.8e-08 61.2 36 66.7
CANSAT64G2852 Cannabis sativa HOM05D004639 ORTHO05D005201 3.8e-08 61.2 32 75.0
ECA234G3785 Erigeron canadensis HOM05D004639 ORTHO05D005201 4.9e-08 60.8 32 78.1
Nitab4.5_0001799g0030 Nicotiana tabacum HOM05D004639 ORTHO05D005201 4.9e-08 60.8 32 78.1
Rhsim11G0007200 Rhododendron simsii HOM05D004639 ORTHO05D005201 4.9e-08 60.8 35 68.6
Ah.05g167280 Amaranthus hybridus HOM05D001485 ORTHO05D001407 6.5e-08 60.5 32 75.0
FvH4_1g27870 Fragaria vesca HOM05D004639 ORTHO05D005201 6.5e-08 60.5 32 71.9
FAN19G3130 Fragaria x ananassa HOM05D004639 ORTHO05D005201 6.5e-08 60.5 32 71.9
FAN26G1776 Fragaria x ananassa HOM05D004639 ORTHO05D005201 6.5e-08 60.5 32 71.9
Phvul.L000400 Phaseolus vulgaris HOM05D004639 ORTHO05D005201 6.5e-08 60.5 32 78.1
Manes.18G143900 Manihot esculenta HOM05D004639 ORTHO05D005201 8.4e-08 60.1 32 75.0
EL10As7g23724 Beta vulgaris HOM05D004639 ORTHO05D005201 1.1e-07 59.7 32 75.0
BcaB04g16901 Brassica carinata HOM05D004639 ORTHO05D005201 1.1e-07 59.7 36 66.7
Carub.0003s0750 Capsella rubella HOM05D004639 ORTHO05D005201 1.1e-07 59.7 36 63.9
AUR62017756 Chenopodium quinoa HOM05D004639 ORTHO05D005201 1.1e-07 59.7 32 75.0
ECA234G0087 Erigeron canadensis HOM05D004639 ORTHO05D005201 1.1e-07 59.7 35 71.4
HanXRQChr12g0386021 Helianthus annuus HOM05D004639 ORTHO05D005201 1.1e-07 59.7 35 68.6
Lsat_1_v5_gn_3_140620 Lactuca sativa HOM05D004639 ORTHO05D005201 1.1e-07 59.7 35 68.6
PGR031G3121 Punica granatum HOM05D004639 ORTHO05D005201 1.1e-07 59.7 32 71.9
QL01p053770 Quercus lobata HOM05D004639 ORTHO05D005201 1.1e-07 59.7 32 75.0
THA.LOC104805811 Tarenaya hassleriana HOM05D004639 ORTHO05D005201 1.1e-07 59.7 32 71.9
Atru.chr9.65 Acer truncatum HOM05D004639 ORTHO05D005201 1.4e-07 59.3 34 64.7
AL3G19300 Arabidopsis lyrata HOM05D004639 ORTHO05D005201 1.4e-07 59.3 36 63.9
CARHR082670 Cardamine hirsuta HOM05D004639 ORTHO05D005201 1.4e-07 59.3 36 63.9
Eucgr.B01580 Eucalyptus grandis HOM05D004639 ORTHO05D005201 1.4e-07 59.3 32 68.8
HanXRQChr16g0532761 Helianthus annuus HOM05D004639 ORTHO05D005201 1.4e-07 59.3 35 68.6
RcHm_v2.0_Chr3g0497491 Rosa chinensis HOM05D004639 ORTHO05D005201 1.9e-07 58.9 32 71.9
Medtr0037s0060 Medicago truncatula HOM05D004639 ORTHO05D005201 2.5e-07 58.5 32 75.0
QL93p0107_0438 Quercus lobata HOM05D004639 ORTHO05D005201 2.5e-07 58.5 32 71.9
Mapoly0049s0024 Marchantia polymorpha HOM05D004639 ORTHO05D005201 3.2e-07 58.2 39 59.0
HPP92_007024 Vanilla planifolia HOM05D004639 ORTHO05D005201 3.2e-07 58.2 32 75.0
HPP92_015994 Vanilla planifolia HOM05D004639 ORTHO05D005201 3.2e-07 58.2 33 72.7
TWI31G0951 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 5.5e-07 57.4 32 71.9
GSVIVG01003641001 Vitis vinifera HOM05D004639 ORTHO05D005201 5.5e-07 57.4 32 71.9
ATR0068G005 Amborella trichopoda HOM05D004639 ORTHO05D005201 7.1e-07 57.0 32 71.9
vmacro04281 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 7.1e-07 57.0 38 63.2
vmacro22429 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 7.1e-07 57.0 38 63.2
SEGI_27362 Sequoiadendron giganteum HOM05D004639 ORTHO05D005201 9.3e-07 56.6 32 71.9
Lj2g0018447 Lotus japonicus HOM05D004639 ORTHO05D005201 1.2e-06 56.2 36 66.7
SHI28181 Sapria himalayana HOM05D000002 ORTHO05D000047 1.2e-06 56.2 44 52.3
VMungo0540G1855 Vigna mungo HOM05D004639 ORTHO05D005201 1.2e-06 56.2 32 71.9
Glyma.13G009500 Glycine max HOM05D004639 ORTHO05D005201 1.6e-06 55.8 32 71.9
TWI15G1026 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 1.6e-06 55.8 32 68.8
HPP92_015991 Vanilla planifolia HOM05D004639 ORTHO05D005201 1.6e-06 55.8 32 71.9
Gohir.A09G007300 Gossypium hirsutum HOM05D004639 ORTHO05D005201 2.1e-06 55.5 32 71.9
Gohir.D09G006600 Gossypium hirsutum HOM05D004639 ORTHO05D005201 2.1e-06 55.5 32 71.9
Gorai.006G008100 Gossypium raimondii HOM05D004639 ORTHO05D005201 2.1e-06 55.5 32 71.9
Medtr0037s0250 Medicago truncatula HOM05D004639 ORTHO05D005201 3.5e-06 54.7 32 68.8
Thecc.04G056700 Theobroma cacao HOM05D004639 ORTHO05D005201 4.6e-06 54.3 32 71.9
MELO3C022885.2 Cucumis melo HOM05D004639 ORTHO05D005201 6.0e-06 53.9 57 49.1
CsaV3_5G037160 Cucumis sativus L. HOM05D004639 ORTHO05D005201 6.0e-06 53.9 57 49.1


User provided reference genes

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