Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 9.7e-36 152.9 75 100.0
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 3.1e-26 121.3 66 84.8
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 3.5e-25 117.9 66 81.8
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.3e-24 115.9 67 80.6
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.7e-24 115.5 67 80.6
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.2e-24 115.2 66 78.8
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 2.9e-24 114.8 67 79.1
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.8e-24 114.4 67 79.1
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.8e-24 114.4 67 79.1
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 6.5e-24 113.6 73 76.7
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.5e-24 113.6 66 77.3
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 6.5e-24 113.6 67 77.6
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 6.5e-24 113.6 66 80.3
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.1e-23 112.8 66 78.8
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 70.8
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.5e-23 111.7 71 74.6
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.5e-23 111.7 66 77.3
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 2.5e-23 111.7 73 74.0
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 3.2e-23 111.3 66 77.3
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 4.2e-23 110.9 66 74.2
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 5.5e-23 110.5 73 75.3
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 5.5e-23 110.5 64 79.7
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.5e-23 110.5 64 79.7
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.5e-23 110.5 64 79.7
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.5e-23 110.5 64 79.7
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 5.5e-23 110.5 66 77.3
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 5.5e-23 110.5 73 75.3
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 5.5e-23 110.5 66 78.8
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 7.2e-23 110.2 67 76.1
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 7.2e-23 110.2 68 76.5
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 7.2e-23 110.2 66 75.8
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 7.2e-23 110.2 66 75.8
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 9.4e-23 109.8 66 75.8
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.4e-23 109.8 67 71.6
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-22 109.4 64 78.1
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-22 109.4 64 79.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-22 109.4 67 73.1
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-22 109.4 67 73.1
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.6e-22 109.0 69 71.0
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.6e-22 109.0 68 72.1
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.6e-22 109.0 66 75.8
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.6e-22 109.0 66 75.8
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 2.1e-22 108.6 71 73.2
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 2.1e-22 108.6 71 73.2
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.1e-22 108.6 66 74.2
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 2.7e-22 108.2 66 75.8
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 2.7e-22 108.2 66 74.2
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 3.6e-22 107.8 66 72.7
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 3.6e-22 107.8 66 74.2
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.6e-22 107.8 67 74.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 4.7e-22 107.5 64 78.1
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 4.7e-22 107.5 66 72.7
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 6.1e-22 107.1 71 71.8
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 8.0e-22 106.7 66 74.2
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 8.0e-22 106.7 67 70.1
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.4e-21 105.9 71 71.8
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.8e-21 105.5 66 74.2
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.8e-21 105.5 67 74.6
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.8e-21 105.5 65 72.3
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.3e-21 105.1 67 71.6
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 3.0e-21 104.8 65 73.8
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 5.2e-21 104.0 67 68.7
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 8.8e-21 103.2 71 67.6
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 8.8e-21 103.2 71 67.6
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.1e-20 102.8 69 68.1
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.1e-20 102.8 76 67.1
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.1e-20 102.8 71 64.8
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 1.5e-20 102.4 66 72.7
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.0e-20 102.1 64 71.9
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.0e-20 102.1 72 65.3
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 2.6e-20 101.7 69 66.7
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 2.6e-20 101.7 63 71.4
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 3.3e-20 101.3 66 69.7
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 5.7e-20 100.5 70 70.0
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 9.7e-20 99.8 64 70.3
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.3e-19 99.4 74 67.6
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.3e-19 99.4 65 72.3
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 3.7e-19 97.8 64 71.9
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 8.2e-19 96.7 96 54.2
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 1.8e-18 95.5 79 60.8
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.8e-18 95.5 66 71.2
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.1e-18 94.7 69 59.4
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.3e-18 94.0 78 61.5
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 5.3e-18 94.0 67 65.7
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 5.3e-18 94.0 64 68.8
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 1.7e-16 89.0 66 66.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 5.5e-15 84.0 138 40.6
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 2.7e-14 81.6 66 62.1
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 4.7e-14 80.9 66 62.1
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 6.1e-14 80.5 126 38.9
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.0e-14 80.1 50 72.0
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 4.0e-13 77.8 46 78.3
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.5e-12 75.9 50 72.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 5.3e-10 67.4 71 50.7
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 9.1e-10 66.6 36 77.8
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 3.5e-09 64.7 35 82.9
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 7.7e-09 63.5 38 73.7
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.0e-08 63.2 36 75.0
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.3e-08 62.8 160 30.0
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.3e-08 62.8 37 70.3
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.7e-08 62.4 35 80.0
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 5.0e-08 60.8 36 69.4
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.0e-08 60.8 36 72.2
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 6.5e-08 60.5 48 54.2
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.5e-07 59.3 68 44.1
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 2.5e-07 58.5 42 69.0
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 3.2e-07 58.2 37 70.3
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.2e-07 57.8 35 71.4
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 5.5e-07 57.4 62 48.4
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 5.5e-07 57.4 31 83.9
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.2e-06 56.2 37 70.3
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 2.7e-06 55.1 29 86.2
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 6.1e-06 53.9 52 53.8
MCO13G197 Micromonas commoda HOM05D055842 ORTHO05D008361 6.1e-06 53.9 46 56.5
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 8.0e-06 53.5 35 65.7


User provided reference genes

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