Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 1.1e-226 789.6 401 100.0
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 9.0e-181 637.1 402 80.8
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 2.6e-180 635.6 402 81.3
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 5.7e-175 617.8 397 79.1
Oeu052085.1 Olea europaea HOM05D000834 ORTHO05D006956 2.2e-174 615.9 402 78.9
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 3.7e-174 615.1 411 77.6
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 9.1e-173 610.5 401 77.3
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 1.2e-172 610.1 400 77.8
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 1.3e-171 606.7 401 77.3
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 1.3e-171 606.7 396 77.3
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 1.7e-171 606.3 400 76.5
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 1.7e-171 606.3 400 75.8
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 3.8e-171 605.1 402 76.9
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 3.8e-171 605.1 400 75.8
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 5.0e-171 604.7 400 76.0
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 1.1e-170 603.6 398 76.6
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 1.4e-170 603.2 401 76.3
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 1.4e-170 603.2 401 76.8
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 3.2e-170 602.1 394 77.4
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 3.2e-170 602.1 400 75.2
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 3.2e-170 602.1 400 75.8
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 4.2e-170 601.7 400 75.5
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 4.2e-170 601.7 400 75.5
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 5.5e-170 601.3 400 74.8
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 5.5e-170 601.3 400 74.8
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 7.2e-170 600.9 400 75.5
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 9.4e-170 600.5 400 75.2
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 1.2e-169 600.1 417 72.7
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 1.6e-169 599.7 400 75.2
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 4.7e-169 598.2 394 77.9
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 4.7e-169 598.2 400 74.8
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 6.1e-169 597.8 397 76.1
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 1.0e-168 597.0 366 80.3
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 1.8e-168 596.3 400 74.5
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 2.3e-168 595.9 400 75.2
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 2.3e-168 595.9 400 75.0
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 2.3e-168 595.9 401 75.6
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 6.7e-168 594.3 424 72.2
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 6.7e-168 594.3 401 74.6
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 6.7e-168 594.3 400 75.8
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.1e-167 593.6 398 75.9
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 1.1e-167 593.6 400 74.5
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 1.5e-167 593.2 400 74.0
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 2.0e-167 592.8 400 75.2
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 2.6e-167 592.4 401 73.6
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 3.3e-167 592.0 432 72.7
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 3.3e-167 592.0 400 74.0
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 7.4e-167 590.9 400 75.5
Sopen09g025590 Solanum pennellii HOM05D000834 ORTHO05D006956 9.7e-167 590.5 401 75.3
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 1.7e-166 589.7 400 75.0
SalBow4G1359 Salvia bowleyana HOM05D000834 ORTHO05D006956 2.8e-166 589.0 500 65.2
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 4.8e-166 588.2 395 74.2
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 4.8e-166 588.2 395 74.2
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 4.8e-166 588.2 396 74.5
Solyc09g064450.3 Solanum lycopersicum HOM05D000834 ORTHO05D006956 4.8e-166 588.2 401 75.1
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 1.1e-165 587.0 400 74.5
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 1.1e-165 587.0 400 75.2
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 3.1e-165 585.5 400 73.8
Carub.0003s3474 Capsella rubella HOM05D000834 ORTHO05D006956 4.1e-165 585.1 395 74.2
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 4.1e-165 585.1 400 74.5
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 5.3e-165 584.7 400 73.2
AT2G20360 Arabidopsis thaliana HOM05D000834 ORTHO05D006956 9.1e-165 583.9 395 74.2
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 9.1e-165 583.9 401 74.6
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 2.0e-164 582.8 397 74.1
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 2.0e-164 582.8 394 74.4
THA.LOC104820067 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 2.0e-164 582.8 395 74.2
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 2.6e-164 582.4 395 74.7
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 3.5e-164 582.0 396 75.3
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 4.5e-164 581.6 400 73.0
AL3G53320 Arabidopsis lyrata HOM05D000834 ORTHO05D006956 1.0e-163 580.5 395 73.4
BcaB07g31592 Brassica carinata HOM05D000834 ORTHO05D006956 1.7e-163 579.7 395 73.7
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 2.2e-163 579.3 395 72.9
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 2.9e-163 578.9 379 76.3
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 5.0e-163 578.2 395 73.7
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 5.0e-163 578.2 395 73.7
Ciclev10020464m.g Citrus clementina HOM05D000834 ORTHO05D006956 5.0e-163 578.2 401 71.8
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 6.5e-163 577.8 360 79.7
Thhalv10002002m.g Eutrema salsugineum HOM05D000834 ORTHO05D006956 6.5e-163 577.8 378 75.4
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 8.5e-163 577.4 398 74.1
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 8.5e-163 577.4 379 76.0
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 8.5e-163 577.4 395 73.9
THA.LOC104814534 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 8.5e-163 577.4 363 77.7
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 1.1e-162 577.0 379 76.0
Lalb_Chr02g0152761 Lupinus albus HOM05D000834 ORTHO05D006956 1.1e-162 577.0 401 72.6
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 1.5e-162 576.6 394 74.1
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 1.5e-162 576.6 396 74.0
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 1.9e-162 576.2 378 75.4
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 2.5e-162 575.9 378 75.7
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 4.2e-162 575.1 400 73.2
Peaxi162Scf00043g00251 Petunia axillaris HOM05D000834 ORTHO05D006956 7.2e-162 574.3 403 73.9
ATR0787G052 Amborella trichopoda HOM05D000834 ORTHO05D006956 1.2e-161 573.5 394 75.1
AUR62025434 Chenopodium quinoa HOM05D000834 ORTHO05D006956 1.2e-161 573.5 402 73.4
Lalb_Chr06g0170741 Lupinus albus HOM05D000834 ORTHO05D006956 1.6e-161 573.2 401 71.8
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 2.7e-161 572.4 378 75.1
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 6.1e-161 571.2 378 74.9
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 1.4e-160 570.1 395 73.2
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 1.8e-160 569.7 391 73.1
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 2.3e-160 569.3 400 72.2
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 2.3e-160 569.3 378 74.9
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 5.2e-160 568.2 410 71.7
HPP92_020769 Vanilla planifolia HOM05D000834 ORTHO05D006956 6.7e-160 567.8 390 72.8
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 1.5e-159 566.6 402 71.6
Nitab4.5_0002435g0060 Nicotiana tabacum HOM05D000834 ORTHO05D006956 3.7e-158 562.0 445 67.0
Os02g0816800 Oryza sativa ssp. japonica HOM05D000834 ORTHO05D006956 4.8e-158 561.6 380 74.7
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 9.1e-157 557.4 365 76.7
Nitab4.5_0000385g0020 Nicotiana tabacum HOM05D000834 ORTHO05D006956 1.6e-156 556.6 445 66.7
SEGI_11456 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 1.1e-154 550.4 354 75.7
BcaB03g16828 Brassica carinata HOM05D000834 ORTHO05D006956 1.0e-152 543.9 378 73.0
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 5.2e-152 541.6 453 66.7
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 2.0e-151 539.7 553 55.5
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 5.7e-151 538.1 417 67.6
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 3.7e-142 508.8 355 74.1
AUR62008805 Chenopodium quinoa HOM05D000834 ORTHO05D006956 2.9e-134 482.6 312 76.0
CDE02G1088 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 2.7e-132 476.1 333 74.2
Dinv19263 Davidia involucrata HOM05D000834 ORTHO05D006956 5.0e-131 471.9 290 78.6
CAN.G536.3 Capsicum annuum HOM05D000834 ORTHO05D006956 1.5e-130 470.3 317 76.7
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 3.1e-128 462.6 310 76.8
SalBow6G5988 Salvia bowleyana HOM05D000834 ORTHO05D006956 3.5e-116 422.5 356 66.0
AagrBONN_evm.TU.Sc2ySwM_368.182 Anthoceros agrestis HOM05D000834 ORTHO05D006956 1.3e-115 420.6 351 59.5
Zm00001eb258880 Zea mays HOM05D000834 ORTHO05D006956 1.6e-113 413.7 262 79.8
Mapoly0051s0097 Marchantia polymorpha HOM05D000834 ORTHO05D006956 1.6e-108 397.1 384 53.6
Pp3c14_9070 Physcomitrium patens HOM05D000834 ORTHO05D006956 8.6e-107 391.3 363 52.1
CBR_g12802 Chara braunii HOM05D000834 ORTHO05D006956 5.2e-104 382.1 344 54.1
SMO119G0351 Selaginella moellendorffii HOM05D000834 ORTHO05D006956 1.8e-96 357.1 349 52.4
Actinidia23703 Actinidia chinensis HOM05D000834 ORTHO05D006956 3.5e-92 342.8 237 77.6
Pp3c1_35920 Physcomitrium patens HOM05D000834 ORTHO05D006956 4.2e-77 292.7 282 49.3
MD15G1374200 Malus domestica HOM05D000834 ORTHO05D006956 9.3e-77 291.6 223 66.8
MCO13G055 Micromonas commoda HOM05D000834 ORTHO05D006956 1.8e-75 287.3 361 43.5
PRCOL_00005891 Prasinoderma coloniale HOM05D000834 ORTHO05D006956 3.0e-67 260.0 366 38.5
Dinv43064 Davidia involucrata HOM05D000834 ORTHO05D006956 1.1e-58 231.5 226 58.0
Cre10.g434450 Chlamydomonas reinhardtii HOM05D000834 ORTHO05D006956 2.0e-58 230.7 347 39.8
SHI26743 Sapria himalayana HOM05D000834 ORTHO05D006956 3.3e-58 229.9 214 60.3
SEGI_20632 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 3.1e-56 223.4 178 68.5
Oeu015439.4 Olea europaea HOM05D000121 ORTHO05D000102 2.3e-51 207.2 266 47.4
Gohir.A13G077301 Gossypium hirsutum HOM05D000834 ORTHO05D006956 2.1e-44 184.1 99 89.9
Gohir.A12G044900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 8.3e-33 145.6 79 86.1
Gohir.A01G059200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 2.4e-32 144.1 82 84.1
vmacro08769 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 3.2e-29 133.7 132 58.3
CDE02G0223 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 1.2e-26 125.2 79 75.9
SHI26740 Sapria himalayana HOM05D000834 ORTHO05D006956 1.2e-20 105.1 106 49.1
BcaB02g11316 Brassica carinata HOM05D000834 ORTHO05D000693 2.2e-17 94.4 63 74.6
vmacro08768 Vaccinium macrocarpon HOM05D000834 ORTHO05D426596 8.3e-17 92.4 65 67.7
Lsat_1_v5_gn_8_148040 Lactuca sativa HOM05D000834 ORTHO05D006956 7.0e-08 62.8 62 51.6
CiPaw.05G147100 Carya illinoinensis HOM05D000834 ORTHO05D006956 3.9e-06 57.0 46 65.2


User provided reference genes

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