Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6216 Utricularia gibba HOM05D003200 ORTHO05D003574 1.2e-40 169.5 91 100.0
MSTRG.18395 Avicennia marina HOM05D003200 ORTHO05D003574 1.1e-09 66.6 117 40.2
MSTRG.17558 Avicennia marina HOM05D003200 ORTHO05D003574 3.2e-09 65.1 122 40.2
EL10Ac4g10333 Beta vulgaris HOM05D003200 ORTHO05D003574 4.2e-09 64.7 105 43.8
Glyma.10G294900 Glycine max HOM05D003200 ORTHO05D003574 5.5e-09 64.3 114 41.2
Glyma.20G244700 Glycine max HOM05D003200 ORTHO05D003574 5.5e-09 64.3 114 41.2
Sc09g0000340 Simmondsia chinensis HOM05D003200 ORTHO05D003574 5.5e-09 64.3 107 43.9
HanXRQChr11g0345461 Helianthus annuus HOM05D003200 ORTHO05D003574 9.4e-09 63.5 120 37.5
QL01p009941 Quercus lobata HOM05D003200 ORTHO05D003574 9.4e-09 63.5 107 41.1
Ah.06g193140 Amaranthus hybridus HOM05D003200 ORTHO05D003574 1.2e-08 63.2 106 42.5
MBI06_g07796_MAGBIO Magnolia biondii HOM05D003200 ORTHO05D003574 1.2e-08 63.2 118 39.8
VMungo0720G1305 Vigna mungo HOM05D003200 ORTHO05D003574 1.2e-08 63.2 106 41.5
CSS0033476 Camellia sinensis var. sinensis HOM05D003200 ORTHO05D003574 1.6e-08 62.8 112 40.2
Phvul.007G005200 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 1.6e-08 62.8 106 41.5
THA.LOC104799746 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 1.6e-08 62.8 107 41.1
Nitab4.5_0001512g0020 Nicotiana tabacum HOM05D003200 ORTHO05D003574 2.1e-08 62.4 119 39.5
Nitab4.5_0003671g0060 Nicotiana tabacum HOM05D003200 ORTHO05D003574 2.1e-08 62.4 119 39.5
Hund21653 Selenicereus undatus HOM05D003200 ORTHO05D003574 2.1e-08 62.4 106 42.5
CAN.G511.12 Capsicum annuum HOM05D003200 ORTHO05D003574 2.7e-08 62.0 119 37.0
Lsat_1_v5_gn_1_68481 Lactuca sativa HOM05D003200 ORTHO05D003574 2.7e-08 62.0 120 39.2
Sc16g0011990 Simmondsia chinensis HOM05D003200 ORTHO05D003574 2.7e-08 62.0 107 43.0
A10p19820 Brassica napus HOM05D003200 ORTHO05D003574 3.6e-08 61.6 108 40.7
BraA10t44058Z Brassica rapa HOM05D003200 ORTHO05D003574 3.6e-08 61.6 108 40.7
Migut.D00540 Erythranthe guttata HOM05D003200 ORTHO05D003574 3.6e-08 61.6 119 37.8
Lj5g0003842 Lotus japonicus HOM05D003200 ORTHO05D003574 4.7e-08 61.2 106 41.5
DCAR_001996 Daucus carota HOM05D003200 ORTHO05D003574 6.1e-08 60.8 118 37.3
Sopen01g010160 Solanum pennellii HOM05D003200 ORTHO05D003574 6.1e-08 60.8 107 40.2
TAR623G0555 Trochodendron aralioides HOM05D003200 ORTHO05D003574 6.1e-08 60.8 111 40.5
PGSC0003DMG400024057 Solanum tuberosum HOM05D003200 ORTHO05D003574 7.9e-08 60.5 107 40.2
TAR369G0274 Trochodendron aralioides HOM05D003200 ORTHO05D003574 7.9e-08 60.5 117 36.8
BcaB08g36558 Brassica carinata HOM05D003200 ORTHO05D003574 1.0e-07 60.1 108 39.8
Gohir.A08G078400 Gossypium hirsutum HOM05D003200 ORTHO05D003574 1.4e-07 59.7 96 45.8
Oeu043308.3 Olea europaea HOM05D003200 ORTHO05D003574 1.4e-07 59.7 112 38.4
Rhsim13G0227400 Rhododendron simsii HOM05D003200 ORTHO05D003574 1.4e-07 59.7 117 36.8
THA.LOC104811052 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 1.4e-07 59.7 109 42.2
Actinidia06303 Actinidia chinensis HOM05D003200 ORTHO05D003574 1.8e-07 59.3 106 40.6
Dinv36326 Davidia involucrata HOM05D003200 ORTHO05D003574 1.8e-07 59.3 118 37.3
Aqoxy1G00122 Aquilegia oxysepala HOM05D003200 ORTHO05D003574 2.3e-07 58.9 118 35.6
C09p56140 Brassica napus HOM05D003200 ORTHO05D003574 2.3e-07 58.9 108 38.9
BolC9t58481H Brassica oleracea HOM05D003200 ORTHO05D003574 2.3e-07 58.9 108 38.9
Lj2P674T26 Lonicera japonica HOM05D003200 ORTHO05D003574 2.3e-07 58.9 106 39.6
Thhalv10013350m.g Eutrema salsugineum HOM05D003200 ORTHO05D003574 3.0e-07 58.5 107 39.3
SGA_v2.0_scaffold1G00760 Striga asiatica HOM05D003200 ORTHO05D003574 3.9e-07 58.2 111 38.7
BcaC04g19396 Brassica carinata HOM05D003200 ORTHO05D003574 5.1e-07 57.8 108 38.0
AT5G19900 Arabidopsis thaliana HOM05D003200 ORTHO05D003574 6.7e-07 57.4 108 41.7
Nitab4.5_0003436g0110 Nicotiana tabacum HOM05D003200 ORTHO05D003574 8.8e-07 57.0 107 38.3
AL6G31430 Arabidopsis lyrata HOM05D003200 ORTHO05D003574 1.1e-06 56.6 107 38.3
Carub.0006s1827 Capsella rubella HOM05D003200 ORTHO05D003574 1.1e-06 56.6 107 38.3
BolC3t13598H Brassica oleracea HOM05D003200 ORTHO05D003574 1.5e-06 56.2 108 39.8
Gohir.D08G088300 Gossypium hirsutum HOM05D003200 ORTHO05D003574 1.5e-06 56.2 105 42.9
Gorai.004G092700 Gossypium raimondii HOM05D003200 ORTHO05D003574 1.5e-06 56.2 105 42.9
CARHR192960 Cardamine hirsuta HOM05D003200 ORTHO05D003574 2.0e-06 55.8 107 38.3
unitig_0.g182 Utricularia gibba HOM05D003200 ORTHO05D003574 2.0e-06 55.8 123 35.8
unitig_60.g25721 Utricularia gibba HOM05D003200 ORTHO05D003574 2.0e-06 55.8 123 35.8
Peaxi162Scf00780g00043 Petunia axillaris HOM05D003200 ORTHO05D003574 2.6e-06 55.5 119 35.3
MELO3C014649.2 Cucumis melo HOM05D003200 ORTHO05D003574 3.3e-06 55.1 108 38.9
CsaV3_4G023690 Cucumis sativus L. HOM05D003200 ORTHO05D003574 3.3e-06 55.1 108 38.9
PSO339G4963 Papaver somniferum HOM05D003200 ORTHO05D003574 3.3e-06 55.1 117 37.6
ClCG02G023720 Citrullus lanatus HOM05D003200 ORTHO05D003574 4.4e-06 54.7 108 38.9
Os02g0832600 Oryza sativa ssp. japonica HOM05D003200 ORTHO05D003574 4.4e-06 54.7 118 34.7
Lsat_1_v5_gn_6_49141 Lactuca sativa HOM05D003200 ORTHO05D003574 5.7e-06 54.3 108 38.0
Sp6g24480 Schrenkiella parvula HOM05D003200 ORTHO05D003574 5.7e-06 54.3 107 39.3
Hma1.2p1_0505F.1_g168170 Hydrangea macrophylla HOM05D003200 ORTHO05D003574 7.4e-06 53.9 109 36.7
Lalb_Chr06g0164391 Lupinus albus HOM05D003200 ORTHO05D003574 7.4e-06 53.9 117 37.6
Oeu058542.1 Olea europaea HOM05D003200 ORTHO05D003574 9.7e-06 53.5 57 57.9
SalBow7G0874 Salvia bowleyana HOM05D003200 ORTHO05D003574 9.7e-06 53.5 111 37.8
SalBow7G4053 Salvia bowleyana HOM05D003200 ORTHO05D003574 9.7e-06 53.5 111 37.8
unitig_26.g10121 Utricularia gibba HOM05D003200 ORTHO05D003574 9.7e-06 53.5 122 36.1


User provided reference genes

Program Settings