Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6172 Utricularia gibba HOM05D001997 ORTHO05D004620 0.0e+00 1206.0 627 100.0
MSTRG.12412 Avicennia marina HOM05D001997 ORTHO05D004620 5.2e-199 698.4 647 59.8
MSTRG.17660 Avicennia marina HOM05D001997 ORTHO05D004620 2.6e-198 696.0 647 60.3
Oeu015677.2 Olea europaea HOM05D001997 ORTHO05D004620 2.5e-185 652.9 650 57.2
SGA_v2.0_scaffold16G07570 Striga asiatica HOM05D001997 ORTHO05D004620 6.6e-178 628.2 643 57.2
Migut.N02417 Erythranthe guttata HOM05D001997 ORTHO05D004620 3.6e-176 622.5 639 57.6
Lj6C60T7 Lonicera japonica HOM05D001997 ORTHO05D004620 1.2e-174 617.5 641 54.9
Nitab4.5_0010690g0010 Nicotiana tabacum HOM05D001997 ORTHO05D004620 1.0e-170 604.4 638 55.5
Peaxi162Scf00375g00082 Petunia axillaris HOM05D001997 ORTHO05D004620 8.6e-170 601.3 638 54.4
Cc01_g08750 Coffea canephora HOM05D001997 ORTHO05D004620 6.2e-168 595.1 647 53.3
Sopen06g029850 Solanum pennellii HOM05D001997 ORTHO05D004620 1.4e-167 594.0 648 53.9
Dinv22695 Davidia involucrata HOM05D001997 ORTHO05D004620 1.5e-166 590.5 633 54.7
PGSC0003DMG400026903 Solanum tuberosum HOM05D001997 ORTHO05D004620 5.8e-166 588.6 648 53.1
QL10p047463 Quercus lobata HOM05D001997 ORTHO05D004620 1.7e-165 587.0 642 52.6
Cfa015772 Carpinus fangiana HOM05D001997 ORTHO05D004620 3.7e-165 585.9 643 52.9
Rhsim09G0030400 Rhododendron simsii HOM05D001997 ORTHO05D004620 5.4e-164 582.0 642 52.2
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 1.7e-162 577.0 636 53.1
PGR044G1365 Punica granatum HOM05D001997 ORTHO05D004620 3.9e-162 575.9 644 52.0
Gohir.D08G083300 Gossypium hirsutum HOM05D001997 ORTHO05D004620 1.9e-161 573.5 646 51.4
Gorai.006G186500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.5e-161 573.2 643 51.8
Gorai.004G087500 Gossypium raimondii HOM05D001997 ORTHO05D004620 1.2e-160 570.9 642 51.4
Sabra17G0022600 Salix brachista HOM05D001997 ORTHO05D004620 2.1e-160 570.1 650 50.9
Actinidia35961 Actinidia chinensis HOM05D001997 ORTHO05D004620 3.6e-160 569.3 640 51.2
Gohir.A08G074100 Gossypium hirsutum HOM05D001997 ORTHO05D004620 6.2e-160 568.5 642 51.4
Hma1.2p1_0597F.1_g186510 Hydrangea macrophylla HOM05D001997 ORTHO05D004620 8.1e-160 568.2 642 51.9
Potri.007G124700 Populus trichocarpa HOM05D001997 ORTHO05D004620 1.2e-158 564.3 648 50.0
Potri.017G035700 Populus trichocarpa HOM05D001997 ORTHO05D004620 6.4e-157 558.5 647 49.8
Ciclev10019328m.g Citrus clementina HOM05D001997 ORTHO05D004620 8.4e-157 558.1 631 51.5
Duzib093G0427 Durio zibethinus HOM05D001997 ORTHO05D004620 4.1e-156 555.8 639 50.9
Atru.chr3.1570 Acer truncatum HOM05D001997 ORTHO05D004620 5.4e-156 555.4 643 50.2
Atru.chr3.1589 Acer truncatum HOM05D001997 ORTHO05D004620 5.4e-156 555.4 643 50.2
CANSAT21G1219 Cannabis sativa HOM05D001997 ORTHO05D004620 5.4e-156 555.4 636 50.2
TWI36G0125 Tripterygium wilfordii HOM05D001997 ORTHO05D004620 5.4e-156 555.4 646 49.8
CiPaw.02G056300 Carya illinoinensis HOM05D001997 ORTHO05D004620 3.5e-155 552.7 632 50.8
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 6.0e-155 552.0 640 48.8
TAR622G0498 Trochodendron aralioides HOM05D001997 ORTHO05D004620 6.0e-155 552.0 649 50.7
Lsat_1_v5_gn_6_55020 Lactuca sativa HOM05D001997 ORTHO05D004620 1.3e-154 550.8 638 49.1
TAR636G0474 Trochodendron aralioides HOM05D001997 ORTHO05D004620 1.3e-154 550.8 650 50.3
CSS0007184 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D004620 7.3e-153 545.0 604 52.0
FvH4_7g14000 Fragaria vesca HOM05D001997 ORTHO05D004620 1.6e-152 543.9 659 49.5
THA.LOC104802304 Tarenaya hassleriana HOM05D001997 ORTHO05D004620 3.6e-152 542.7 640 49.7
FAN10G2611 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.1e-151 541.2 661 49.6
FAN10G3464 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.1e-151 541.2 661 49.6
ECA233G5997 Erigeron canadensis HOM05D001997 ORTHO05D004620 1.4e-151 540.8 640 48.0
FAN01G1889 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.8e-151 540.4 664 48.9
Sc19g0002180 Simmondsia chinensis HOM05D001997 ORTHO05D004620 1.8e-151 540.4 639 50.1
FAN06G3325 Fragaria x ananassa HOM05D001997 ORTHO05D004620 6.8e-151 538.5 659 49.2
HanXRQChr02g0057961 Helianthus annuus HOM05D001997 ORTHO05D004620 6.8e-151 538.5 641 49.0
FAN06G4213 Fragaria x ananassa HOM05D001997 ORTHO05D004620 8.9e-151 538.1 659 49.2
Manes.04G048600 Manihot esculenta HOM05D001997 ORTHO05D004620 8.9e-151 538.1 648 49.7
FAN03G0113 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.2e-150 537.7 654 49.2
RcHm_v2.0_Chr1g0354651 Rosa chinensis HOM05D001997 ORTHO05D004620 3.4e-150 536.2 659 47.8
HanXRQChr07g0186151 Helianthus annuus HOM05D001997 ORTHO05D004620 5.8e-150 535.4 634 49.2
FAN10G4317 Fragaria x ananassa HOM05D001997 ORTHO05D004620 7.6e-150 535.0 659 48.6
Prupe.2G167200 Prunus persica HOM05D001997 ORTHO05D004620 2.2e-149 533.5 636 48.3
MD07G1139400 Malus domestica HOM05D001997 ORTHO05D004620 5.4e-148 528.9 646 48.8
Dinv05995 Davidia involucrata HOM05D001997 ORTHO05D004620 4.3e-145 519.2 633 48.8
AT2G43250 Arabidopsis thaliana HOM05D001997 ORTHO05D004620 7.3e-145 518.5 640 47.8
Sp4g25380 Schrenkiella parvula HOM05D001997 ORTHO05D004620 9.6e-145 518.1 646 48.5
MBI11_g35030_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D004620 2.1e-144 516.9 635 48.7
Thhalv10001801m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 1.1e-143 514.6 633 49.3
Lj3g0010188 Lotus japonicus HOM05D001997 ORTHO05D004620 4.0e-143 512.7 647 48.2
CARHR138340 Cardamine hirsuta HOM05D001997 ORTHO05D004620 1.5e-142 510.8 633 48.5
Nitab4.5_0002368g0100 Nicotiana tabacum HOM05D001997 ORTHO05D004620 2.6e-142 510.0 555 54.6
Phvul.011G023500 Phaseolus vulgaris HOM05D001997 ORTHO05D004620 1.7e-141 507.3 627 48.3
BraA04t18717Z Brassica rapa HOM05D001997 ORTHO05D004620 8.4e-141 505.0 630 48.3
A04p32530 Brassica napus HOM05D001997 ORTHO05D004620 1.9e-140 503.8 630 48.1
Glyma.11G094600 Glycine max HOM05D001997 ORTHO05D004620 2.4e-140 503.4 636 48.0
AUR62035000 Chenopodium quinoa HOM05D001997 ORTHO05D004620 3.2e-140 503.1 646 47.2
BolC4t28526H Brassica oleracea HOM05D001997 ORTHO05D004620 2.7e-139 500.0 629 47.7
BcaC02g07197 Brassica carinata HOM05D001997 ORTHO05D004620 3.5e-139 499.6 629 47.5
C04p70220 Brassica napus HOM05D001997 ORTHO05D004620 3.5e-139 499.6 629 47.5
Aqoxy7G03960 Aquilegia oxysepala HOM05D001997 ORTHO05D004620 3.9e-138 496.1 650 45.2
Thecc.05G002900 Theobroma cacao HOM05D001997 ORTHO05D004620 3.9e-138 496.1 643 47.6
arahy.Tifrunner.gnm1.ann1.7X5TTD Arachis hypogaea HOM05D001997 ORTHO05D004620 1.8e-135 487.3 639 47.3
VMungo1127G1251 Vigna mungo HOM05D001997 ORTHO05D004620 3.1e-135 486.5 637 46.5
Psat7g172720 Pisum sativum HOM05D001997 ORTHO05D004620 5.3e-135 485.7 640 46.4
Ah.05g167000 Amaranthus hybridus HOM05D001997 ORTHO05D004620 1.5e-134 484.2 642 45.5
BcaB06g29293 Brassica carinata HOM05D001997 ORTHO05D004620 2.6e-134 483.4 591 48.9
AL4G41910 Arabidopsis lyrata HOM05D001997 ORTHO05D004620 1.3e-133 481.1 642 46.1
Ca_26058_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 1.3e-133 481.1 661 45.4
Glyma.03G127700 Glycine max HOM05D001997 ORTHO05D004620 4.9e-133 479.2 647 45.4
Ca_30128_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 2.4e-132 476.9 657 45.4
AUR62037461 Chenopodium quinoa HOM05D001997 ORTHO05D004620 2.7e-131 473.4 646 45.5
arahy.Tifrunner.gnm1.ann1.JTZ133 Arachis hypogaea HOM05D001997 ORTHO05D004620 7.9e-131 471.9 626 45.0
TPR.G13756 Trifolium pratense HOM05D001997 ORTHO05D004620 8.7e-130 468.4 642 44.7
Medtr4g076620 Medicago truncatula HOM05D001997 ORTHO05D004620 4.3e-129 466.1 646 45.5
PSO675G0019 Papaver somniferum HOM05D001997 ORTHO05D004620 1.3e-128 464.5 659 44.9
PSO017G4366 Papaver somniferum HOM05D001997 ORTHO05D004620 3.1e-127 459.9 654 44.6
HPP92_007608 Vanilla planifolia HOM05D001997 ORTHO05D004620 1.5e-126 457.6 638 43.1
CDE08G0116 Ceratophyllum demersum HOM05D001997 ORTHO05D004620 2.6e-126 456.8 633 44.4
DCAR_010832 Daucus carota HOM05D001997 ORTHO05D004620 6.5e-125 452.2 587 46.5
Medtr4g076640 Medicago truncatula HOM05D001997 ORTHO05D004620 4.6e-123 446.0 620 45.2
Lj4g0020139 Lotus japonicus HOM05D001997 ORTHO05D004620 1.0e-122 444.9 622 46.1
ATR0743G280 Amborella trichopoda HOM05D001997 ORTHO05D004620 2.6e-118 430.3 650 41.7
TPR.G13749 Trifolium pratense HOM05D001997 ORTHO05D004620 4.2e-116 422.9 642 42.8
Sabra17G0022300 Salix brachista HOM05D001997 ORTHO05D004620 2.5e-113 413.7 584 45.2
Carub.0004s2573 Capsella rubella HOM05D001997 ORTHO05D004620 1.3e-112 411.4 624 42.9
Glyma.12G021000 Glycine max HOM05D001997 ORTHO05D004620 2.8e-112 410.2 621 42.7
Solyc06g073490.2 Solanum lycopersicum HOM05D001997 ORTHO05D004620 1.8e-111 407.5 400 58.0
Cfa015264 Carpinus fangiana HOM05D001997 ORTHO05D004620 5.3e-111 406.0 630 42.7
Eucgr.A00056 Eucalyptus grandis HOM05D001997 ORTHO05D004620 6.9e-111 405.6 430 55.3
SEGI_28245 Sequoiadendron giganteum HOM05D001997 ORTHO05D004620 9.0e-111 405.2 668 39.5
Zm00001eb425530 Zea mays HOM05D001997 ORTHO05D004620 9.0e-111 405.2 675 39.3
SalBow3G0527 Salvia bowleyana HOM05D001997 ORTHO05D004620 5.9e-110 402.5 340 65.6
Os04g0490700 Oryza sativa ssp. japonica HOM05D001997 ORTHO05D004620 2.9e-109 400.2 677 39.3
Haze_01373 Corylus avellana HOM05D001997 ORTHO05D004620 2.5e-108 397.1 629 41.3
Gohir.D09G164700 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.7e-107 393.7 467 51.0
Gohir.A09G169000 Gossypium hirsutum HOM05D001997 ORTHO05D004620 3.3e-105 386.7 467 50.5
Thhalv10001772m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 7.2e-100 369.0 629 41.2
Nn5g27952 Nelumbo nucifera HOM05D001997 ORTHO05D004620 3.3e-97 360.1 516 41.9
Lalb_Chr01g0001101 Lupinus albus HOM05D001997 ORTHO05D004620 4.2e-92 343.2 400 51.8
C04p04300 Brassica napus HOM05D001997 ORTHO05D004620 4.4e-89 333.2 619 37.3
BraA05t19355Z Brassica rapa HOM05D001997 ORTHO05D004620 4.4e-89 333.2 615 36.9
BolC4t22066H Brassica oleracea HOM05D001997 ORTHO05D004620 9.7e-89 332.0 620 37.7
A05p03690 Brassica napus HOM05D001997 ORTHO05D004620 1.3e-88 331.6 615 36.9
C08p23950 Brassica napus HOM05D001997 ORTHO05D004620 1.3e-88 331.6 628 37.6
Cpa.g.sc81.168 Carica papaya HOM05D001997 ORTHO05D004620 5.9e-86 322.8 633 36.2
BolC8t50019H Brassica oleracea HOM05D001997 ORTHO05D004620 1.7e-80 304.7 628 35.5
Glyma.19G130251 Glycine max HOM05D001997 ORTHO05D004620 2.2e-80 304.3 333 53.5
BcaC07g39373 Brassica carinata HOM05D001997 ORTHO05D004620 1.8e-79 301.2 615 35.6
GSVIVG01013581001 Vitis vinifera HOM05D001997 ORTHO05D004620 8.5e-77 292.4 408 42.9
A06p18770 Brassica napus HOM05D001997 ORTHO05D004620 2.6e-73 280.8 631 34.4
RcHm_v2.0_Chr1g0373181 Rosa chinensis HOM05D001997 ORTHO05D004620 3.5e-70 270.4 606 34.2
MD01G1056400 Malus domestica HOM05D001997 ORTHO05D004620 1.7e-69 268.1 391 42.2
FvH4_7g26521 Fragaria vesca HOM05D001997 ORTHO05D004620 2.3e-69 267.7 605 33.4
Mapoly0021s0032 Marchantia polymorpha HOM05D001997 ORTHO05D004620 2.3e-69 267.7 666 32.3
FAN06G2538 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.4e-63 246.5 604 32.5
BcaNung06617 Brassica carinata HOM05D001997 ORTHO05D004620 2.3e-61 241.1 591 33.7
FAN03G0465 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.0e-61 240.0 604 32.3
FAN10G3679 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.6e-59 233.8 603 30.8
FAN01G2316 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.0e-49 201.4 413 32.9
Pp3c13_12610 Physcomitrium patens HOM05D001997 ORTHO05D004620 2.9e-40 171.0 653 29.2
BraA06t24958Z Brassica rapa HOM05D001997 ORTHO05D004620 8.6e-37 159.5 492 30.3
GSVIVG01013582001 Vitis vinifera HOM05D001997 ORTHO05D004620 4.3e-36 157.1 169 54.4
Actinidia28986 Actinidia chinensis HOM05D001997 ORTHO05D004620 2.6e-33 147.9 242 41.7
TPR.G11744 Trifolium pratense HOM05D001997 ORTHO05D004620 2.9e-32 144.4 309 36.2
CAN.G138.1 Capsicum annuum HOM05D001997 ORTHO05D004620 2.7e-30 137.9 174 51.1
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 1.0e-29 136.0 115 64.3
BcaB06g29296 Brassica carinata HOM05D001997 ORTHO05D004620 2.5e-28 131.3 176 48.9
BcaC07g39374 Brassica carinata HOM05D001997 ORTHO05D004620 1.6e-27 128.6 160 45.0
SalBow3G4162 Salvia bowleyana HOM05D001997 ORTHO05D004620 1.6e-27 128.6 107 61.7
SMO356G0473 Selaginella moellendorffii HOM05D001997 ORTHO05D004620 1.7e-24 118.6 363 27.3
Lsat_1_v5_gn_5_125441 Lactuca sativa HOM05D001997 ORTHO05D004620 7.1e-23 113.2 147 50.3
CAN.G1014.21 Capsicum annuum HOM05D001997 ORTHO05D004620 1.2e-22 112.5 95 66.3
SHI06486 Sapria himalayana HOM05D002588 ORTHO05D002979 1.2e-22 112.5 104 59.6
SGA_v2.0_scaffold4G02500 Striga asiatica HOM05D001997 ORTHO05D004620 3.5e-22 110.9 77 68.8
C04p70240 Brassica napus HOM05D001997 ORTHO05D004620 5.1e-21 107.1 104 56.7
CAN.G765.4 Capsicum annuum HOM05D001997 ORTHO05D004620 4.3e-20 104.0 95 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3298 Anthoceros agrestis HOM05D001997 ORTHO05D004620 2.4e-18 98.2 177 35.6
MD01G1056500 Malus domestica HOM05D001997 ORTHO05D004620 9.0e-18 96.3 86 53.5
SalBow3G4229 Salvia bowleyana HOM05D001997 ORTHO05D004620 1.2e-17 95.9 119 49.6
BcaC02g07196 Brassica carinata HOM05D001997 ORTHO05D004620 3.4e-17 94.4 86 55.8
Dinv44213 Davidia involucrata HOM05D001997 ORTHO05D004620 9.9e-17 92.8 75 64.0
BcaB01g03399 Brassica carinata HOM05D001997 ORTHO05D004620 4.9e-16 90.5 362 26.8
BcaB06g29295 Brassica carinata HOM05D001997 ORTHO05D004620 2.4e-15 88.2 86 53.5
BolC4t28530H Brassica oleracea HOM05D001997 ORTHO05D004620 4.2e-15 87.4 137 41.6
BcaB06g29294 Brassica carinata HOM05D001997 ORTHO05D004620 2.1e-14 85.1 137 46.7
BolC4t28528H Brassica oleracea HOM05D001997 ORTHO05D004620 4.3e-12 77.4 107 46.7
Medtr4g076610 Medicago truncatula HOM05D001997 ORTHO05D004620 7.4e-12 76.6 69 53.6
Actinidia11446 Actinidia chinensis HOM05D001997 ORTHO05D004620 1.1e-10 72.8 144 40.3
A04p32560 Brassica napus HOM05D001997 ORTHO05D004620 2.4e-10 71.6 61 60.7
BraA04t18720Z Brassica rapa HOM05D001997 ORTHO05D004620 2.4e-10 71.6 61 60.7
C04p70260 Brassica napus HOM05D001997 ORTHO05D004620 3.1e-10 71.2 61 60.7
BcaNung06616 Brassica carinata HOM05D001997 ORTHO05D004620 1.4e-07 62.4 88 37.5
C03p28740 Brassica napus HOM05D001997 ORTHO05D004620 9.3e-07 59.7 53 54.7
FAN10G4060 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.2e-06 59.3 82 40.2
TPR.G290 Trifolium pratense HOM05D001997 ORTHO05D004620 2.1e-06 58.5 52 55.8
BcaC05g28816 Brassica carinata HOM05D001997 ORTHO05D004620 2.7e-06 58.2 80 40.0


User provided reference genes

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