Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.9e-84 315.8 168 100.0
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 4.2e-23 112.1 136 61.0
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 2.7e-22 109.4 166 52.4
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 6.1e-22 108.2 151 55.0
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 1.7e-19 100.1 159 51.6
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 6.3e-19 98.2 143 53.8
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 6.3e-19 98.2 104 66.3
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 6.3e-19 98.2 137 56.2
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 6.3e-19 98.2 163 51.5
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 8.3e-19 97.8 170 50.6
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 1.1e-18 97.4 158 46.2
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.4e-18 96.3 133 57.9
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 4.1e-18 95.5 145 51.7
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 4.1e-18 95.5 133 56.4
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 4.1e-18 95.5 144 52.8
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 4.1e-18 95.5 163 50.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 5.4e-18 95.1 103 67.0
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 5.4e-18 95.1 171 45.0
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 5.4e-18 95.1 163 50.3
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 7.0e-18 94.7 163 47.2
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 7.0e-18 94.7 163 47.2
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 7.0e-18 94.7 157 51.6
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 1.2e-17 94.0 103 63.1
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 1.2e-17 94.0 163 49.7
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 1.2e-17 94.0 171 44.4
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 1.6e-17 93.6 133 50.4
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 2.0e-17 93.2 164 49.4
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 2.0e-17 93.2 169 44.4
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 2.0e-17 93.2 113 53.1
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 2.0e-17 93.2 140 55.0
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 2.7e-17 92.8 139 54.7
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 2.7e-17 92.8 102 65.7
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 3.5e-17 92.4 159 49.1
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 3.5e-17 92.4 130 55.4
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 3.5e-17 92.4 109 60.6
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 4.5e-17 92.0 103 61.2
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 5.9e-17 91.7 166 50.0
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 5.9e-17 91.7 170 48.2
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 7.7e-17 91.3 164 48.8
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 7.7e-17 91.3 164 48.8
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 7.7e-17 91.3 103 62.1
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 7.7e-17 91.3 107 62.6
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 1.7e-16 90.1 163 49.7
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 1.7e-16 90.1 101 59.4
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 2.3e-16 89.7 159 47.8
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 2.3e-16 89.7 115 54.8
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.3e-16 89.7 153 41.8
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 3.8e-16 89.0 121 52.9
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 3.8e-16 89.0 116 51.7
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 6.6e-16 88.2 113 55.8
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 6.6e-16 88.2 144 45.1
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.1e-15 87.4 114 56.1
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.5e-15 87.0 113 55.8
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 1.5e-15 87.0 119 55.5
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 1.5e-15 87.0 119 55.5
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 1.5e-15 87.0 119 55.5
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 2.5e-15 86.3 119 55.5
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 2.5e-15 86.3 119 55.5
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 2.5e-15 86.3 103 59.2
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 3.3e-15 85.9 159 50.3
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 4.3e-15 85.5 113 53.1
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 4.3e-15 85.5 103 59.2
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 4.3e-15 85.5 160 48.8
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 5.6e-15 85.1 115 51.3
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 5.6e-15 85.1 158 46.8
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 7.3e-15 84.7 104 61.5
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 9.5e-15 84.3 104 61.5
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 1.2e-14 84.0 110 57.3
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 1.2e-14 84.0 120 46.7
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 1.2e-14 84.0 103 59.2
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 1.2e-14 84.0 104 60.6
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 1.2e-14 84.0 91 56.0
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.6e-14 83.6 146 46.6
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 1.6e-14 83.6 217 33.2
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 2.8e-14 82.8 111 56.8
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 3.6e-14 82.4 126 46.8
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 4.7e-14 82.0 90 54.4
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 6.1e-14 81.6 157 43.9
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 1.4e-13 80.5 103 57.3
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 1.4e-13 80.5 91 62.6
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 8.9e-13 77.8 97 51.5
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 1.2e-12 77.4 90 54.4
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 1.5e-12 77.0 156 39.1
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 3.4e-12 75.9 114 56.1
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 4.4e-12 75.5 104 56.7
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 3.7e-11 72.4 88 58.0
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 3.2e-10 69.3 88 55.7
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 5.4e-10 68.6 104 55.8
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 5.4e-10 68.6 104 55.8
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 5.4e-10 68.6 88 54.5
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 3.3e-07 59.3 102 42.2
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 4.3e-07 58.9 29 86.2
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 2.8e-06 56.2 29 79.3


User provided reference genes

Program Settings