Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6166 Utricularia gibba HOM05D000108 ORTHO05D001378 4.8e-273 944.1 560 100.0
Migut.D02460 Erythranthe guttata HOM05D000108 ORTHO05D001378 1.6e-74 284.6 559 37.0
Migut.O00548 Erythranthe guttata HOM05D000108 ORTHO05D001378 2.7e-74 283.9 567 36.0
Oeu048817.1 Olea europaea HOM05D000108 ORTHO05D001378 3.0e-73 280.4 588 35.0
MSTRG.18801 Avicennia marina HOM05D000108 ORTHO05D001378 7.2e-67 259.2 635 33.1
Peaxi162Scf00259g00125 Petunia axillaris HOM05D000108 ORTHO05D001378 1.5e-64 251.5 563 33.7
Nitab4.5_0002498g0040 Nicotiana tabacum HOM05D000108 ORTHO05D001378 1.1e-62 245.4 560 34.6
Dinv32148 Davidia involucrata HOM05D000108 ORTHO05D001378 6.9e-62 242.7 378 39.4
Cc01_g08000 Coffea canephora HOM05D000108 ORTHO05D001378 1.5e-61 241.5 405 38.8
Cfa010218 Carpinus fangiana HOM05D000108 ORTHO05D001378 8.5e-60 235.7 558 34.4
PGSC0003DMG400003008 Solanum tuberosum HOM05D000108 ORTHO05D001378 4.2e-59 233.4 391 39.1
Rhsim01G0198400 Rhododendron simsii HOM05D000108 ORTHO05D001378 3.0e-57 227.3 569 31.6
QL01p018894 Quercus lobata HOM05D000108 ORTHO05D001378 7.4e-56 222.6 590 31.0
Lj2A835T19 Lonicera japonica HOM05D000108 ORTHO05D001378 2.8e-55 220.7 573 29.8
Actinidia22458 Actinidia chinensis HOM05D000108 ORTHO05D001378 3.7e-55 220.3 595 30.9
FAN25G1370 Fragaria x ananassa HOM05D000108 ORTHO05D001378 4.8e-55 219.9 361 38.0
TWI79G1662 Tripterygium wilfordii HOM05D000108 ORTHO05D001378 4.8e-55 219.9 355 40.0
Ciclev10027695m.g Citrus clementina HOM05D000108 ORTHO05D001378 1.1e-54 218.8 361 38.2
FAN11G2165 Fragaria x ananassa HOM05D000108 ORTHO05D001378 2.4e-54 217.6 361 37.7
CiPaw.13G125600 Carya illinoinensis HOM05D000108 ORTHO05D001378 7.0e-54 216.1 584 31.3
Sed0019972 Sechium edule HOM05D000108 ORTHO05D001378 7.0e-54 216.1 552 31.7
FvH4_3g26820 Fragaria vesca HOM05D000108 ORTHO05D001378 9.1e-54 215.7 361 37.1
CAN.G742.6 Capsicum annuum HOM05D000108 ORTHO05D001378 5.9e-53 213.0 565 35.2
FAN16G2246 Fragaria x ananassa HOM05D000108 ORTHO05D001378 7.7e-53 212.6 361 36.6
RcHm_v2.0_Chr5g0049231 Rosa chinensis HOM05D000108 ORTHO05D001378 2.9e-52 210.7 361 38.2
FAN21G0222 Fragaria x ananassa HOM05D000108 ORTHO05D001378 3.8e-52 210.3 361 37.7
Gorai.009G081900 Gossypium raimondii HOM05D000108 ORTHO05D001378 3.8e-52 210.3 559 32.6
Gohir.A05G077400 Gossypium hirsutum HOM05D000108 ORTHO05D001378 1.9e-51 208.0 559 32.4
Sopen11g029400 Solanum pennellii HOM05D000108 ORTHO05D001378 4.2e-51 206.8 396 36.9
vmacro14307 Vaccinium macrocarpon HOM05D000108 ORTHO05D001378 5.5e-51 206.5 556 31.8
ClCG06G014170 Citrullus lanatus HOM05D000108 ORTHO05D001378 4.7e-50 203.4 580 35.2
CANSAT54G0196 Cannabis sativa HOM05D000108 ORTHO05D001378 1.4e-49 201.8 561 30.8
Duzib168G2250 Durio zibethinus HOM05D000108 ORTHO05D001378 3.9e-49 200.3 564 31.2
Duzib150G0790 Durio zibethinus HOM05D000108 ORTHO05D001378 5.2e-49 199.9 564 31.7
Nitab4.5_0007815g0020 Nicotiana tabacum HOM05D000108 ORTHO05D001378 5.2e-49 199.9 364 38.2
Thecc.09G269500 Theobroma cacao HOM05D000108 ORTHO05D001378 9.7e-48 195.7 576 31.9
TAR636G0209 Trochodendron aralioides HOM05D000108 ORTHO05D001378 1.3e-47 195.3 564 29.8
CsaV3_1G004510 Cucumis sativus L. HOM05D000108 ORTHO05D001378 2.8e-47 194.1 563 30.0
Prupe.6G149000 Prunus persica HOM05D000108 ORTHO05D001378 2.8e-47 194.1 561 30.1
ECA238G3279 Erigeron canadensis HOM05D000108 ORTHO05D001378 3.7e-47 193.7 553 30.6
MD03G1160900 Malus domestica HOM05D000108 ORTHO05D001378 1.8e-46 191.4 356 34.8
Atru.chr3.3051 Acer truncatum HOM05D000108 ORTHO05D001378 1.6e-45 188.3 532 31.8
CSS0042983 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001378 2.6e-45 187.6 578 30.8
MELO3C017377.2 Cucumis melo HOM05D000108 ORTHO05D001378 2.6e-45 187.6 552 29.7
Cpa.g.sc103.41 Carica papaya HOM05D000108 ORTHO05D001378 5.9e-45 186.4 583 29.8
Manes.04G063200 Manihot esculenta HOM05D000108 ORTHO05D001378 5.9e-45 186.4 369 36.6
MD11G1176500 Malus domestica HOM05D000108 ORTHO05D001378 2.9e-44 184.1 360 33.6
Sabra09G0122300 Salix brachista HOM05D000108 ORTHO05D001378 8.5e-44 182.6 334 34.1
Gohir.D05G080200 Gossypium hirsutum HOM05D000108 ORTHO05D001378 1.5e-43 181.8 492 32.3
Atru.chr3.3060 Acer truncatum HOM05D000108 ORTHO05D001378 2.1e-42 177.9 532 31.0
Haze_23605 Corylus avellana HOM05D000108 ORTHO05D001378 3.6e-42 177.2 649 28.7
Lsat_1_v5_gn_2_38920 Lactuca sativa HOM05D000108 ORTHO05D001378 3.6e-42 177.2 492 29.9
THA.LOC104810947 Tarenaya hassleriana HOM05D000108 ORTHO05D001378 8.0e-42 176.0 330 35.5
Potri.009G156000 Populus trichocarpa HOM05D000108 ORTHO05D001378 1.0e-41 175.6 397 32.5
EL10Ac7g16261 Beta vulgaris HOM05D000108 ORTHO05D001378 3.0e-41 174.1 560 28.8
Sp5g17250 Schrenkiella parvula HOM05D000108 ORTHO05D001378 6.7e-41 172.9 379 32.7
Nn2g14427 Nelumbo nucifera HOM05D000108 ORTHO05D001378 5.7e-40 169.9 570 27.7
Sabra04G0131900 Salix brachista HOM05D000108 ORTHO05D001378 5.7e-40 169.9 395 32.4
Thhalv10010073m.g Eutrema salsugineum HOM05D000108 ORTHO05D001378 1.3e-39 168.7 368 32.9
Aa31LG4G13630 Aethionema arabicum HOM05D000108 ORTHO05D001378 2.8e-39 167.5 353 33.7
Aa31LG2G17170 Aethionema arabicum HOM05D000108 ORTHO05D001378 4.8e-39 166.8 372 31.5
BraA06t25310Z Brassica rapa HOM05D000108 ORTHO05D001378 6.3e-39 166.4 335 33.7
PGR102G2325 Punica granatum HOM05D000108 ORTHO05D001378 6.3e-39 166.4 360 35.8
Glyma.13G310700 Glycine max HOM05D000108 ORTHO05D001378 2.4e-38 164.5 562 29.0
HanXRQChr05g0137031 Helianthus annuus HOM05D000108 ORTHO05D001378 2.4e-38 164.5 577 26.7
A06p22220 Brassica napus HOM05D000108 ORTHO05D001378 4.1e-38 163.7 335 33.7
Eucgr.B03797 Eucalyptus grandis HOM05D000108 ORTHO05D001378 7.0e-38 162.9 361 33.5
Lalb_Chr24g0393321 Lupinus albus HOM05D000108 ORTHO05D001378 9.1e-38 162.5 374 33.2
PSO384G4884 Papaver somniferum HOM05D000108 ORTHO05D001378 9.1e-38 162.5 342 33.9
AUR62001584 Chenopodium quinoa HOM05D000108 ORTHO05D001378 5.9e-37 159.8 585 27.9
arahy.Tifrunner.gnm1.ann1.GT6U7J Arachis hypogaea HOM05D000108 ORTHO05D001378 1.0e-36 159.1 360 31.7
AT3G44050 Arabidopsis thaliana HOM05D000108 ORTHO05D001378 1.3e-36 158.7 379 30.6
BolC3t19131H Brassica oleracea HOM05D000108 ORTHO05D001378 1.3e-36 158.7 349 33.0
arahy.Tifrunner.gnm1.ann1.12RI9F Arachis hypogaea HOM05D000108 ORTHO05D001378 1.7e-36 158.3 360 31.4
C03p68770 Brassica napus HOM05D000108 ORTHO05D001378 1.7e-36 158.3 349 33.0
Aqoxy2G00635 Aquilegia oxysepala HOM05D000108 ORTHO05D001378 2.9e-36 157.5 564 28.0
Carub.0005s0979 Capsella rubella HOM05D000108 ORTHO05D001378 2.9e-36 157.5 409 31.1
BcaC01g02082 Brassica carinata HOM05D000108 ORTHO05D001378 5.0e-36 156.8 349 33.0
Ah.15g099080 Amaranthus hybridus HOM05D000108 ORTHO05D001378 6.5e-36 156.4 558 26.3
Glyma.12G191000 Glycine max HOM05D000108 ORTHO05D001378 1.5e-35 155.2 400 29.8
BcaB01g01202 Brassica carinata HOM05D000108 ORTHO05D001378 4.2e-35 153.7 398 31.4
AL5G22070 Arabidopsis lyrata HOM05D000108 ORTHO05D001378 1.2e-34 152.1 396 31.1
Potri.004G193700 Populus trichocarpa HOM05D000108 ORTHO05D001378 1.6e-34 151.8 387 30.5
Phvul.005G117200 Phaseolus vulgaris HOM05D000108 ORTHO05D001378 2.1e-34 151.4 557 26.2
AUR62020199 Chenopodium quinoa HOM05D000108 ORTHO05D001378 2.7e-34 151.0 561 26.9
CARHR152720 Cardamine hirsuta HOM05D000108 ORTHO05D001378 4.7e-34 150.2 375 30.4
MBI05_g27524_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D001378 8.0e-34 149.4 526 28.1
VMungo1080G1113 Vigna mungo HOM05D000108 ORTHO05D001378 8.0e-34 149.4 405 29.4
TPR.G4215 Trifolium pratense HOM05D000108 ORTHO05D001378 3.0e-33 147.5 399 31.3
Psat5g263040 Pisum sativum HOM05D000108 ORTHO05D001378 4.0e-33 147.1 336 33.3
Hund20965 Selenicereus undatus HOM05D000108 ORTHO05D001378 6.3e-31 139.8 558 26.2
Lj3g0001879 Lotus japonicus HOM05D000108 ORTHO05D001378 8.3e-31 139.4 381 30.4
Sc21g0006680 Simmondsia chinensis HOM05D000108 ORTHO05D001378 1.8e-30 138.3 365 30.7
Ca_01618_v3 Cicer arietinum L. HOM05D000108 ORTHO05D001378 4.1e-30 137.1 559 27.9
PSO339G5089 Papaver somniferum HOM05D000108 ORTHO05D001378 5.9e-29 133.3 370 31.1
DCAR_001040 Daucus carota HOM05D000108 ORTHO05D001378 2.3e-28 131.3 580 25.9
Medtr2g087840 Medicago truncatula HOM05D000108 ORTHO05D001378 6.6e-28 129.8 557 26.8
TAR633G0911 Trochodendron aralioides HOM05D000108 ORTHO05D001378 9.8e-24 115.9 512 26.0
ATR0697G287 Amborella trichopoda HOM05D000108 ORTHO05D001378 1.3e-23 115.5 360 27.5
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 1.7e-20 105.1 400 25.8
GSVIVG01037540001 Vitis vinifera HOM05D000108 ORTHO05D001378 1.1e-19 102.4 170 38.2
COL.COLO4_25387 Corchorus olitorius HOM05D000108 ORTHO05D001378 2.5e-19 101.3 558 24.9
Solyc11g071730.3 Solanum lycopersicum HOM05D000108 ORTHO05D001378 4.3e-19 100.5 236 34.7
Os03g0750300 Oryza sativa ssp. japonica HOM05D000108 ORTHO05D001378 1.8e-17 95.1 357 28.3
Zm00001eb057370 Zea mays HOM05D000108 ORTHO05D001378 8.9e-17 92.8 414 26.3
SHI25284 Sapria himalayana HOM05D000108 ORTHO05D001378 1.4e-14 85.5 376 28.2
CSS0001215 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001378 6.0e-13 80.1 364 27.2
Actinidia06349 Actinidia chinensis HOM05D000108 ORTHO05D001378 3.4e-08 64.3 108 34.3
HPP92_018835 Vanilla planifolia HOM05D000108 ORTHO05D001378 7.5e-08 63.2 261 25.3
Zm00001eb210340 Zea mays HOM05D000108 ORTHO05D001378 1.3e-07 62.4 436 24.1


User provided reference genes

Program Settings