Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6092 Utricularia gibba HOM05D009707 ORTHO05D011401 5.6e-39 163.7 77 100.0
unitig_62.g23059 Utricularia gibba HOM05D000034 ORTHO05D011401 2.5e-23 111.7 66 78.8
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 2.5e-10 68.6 85 38.8
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 2.7e-09 65.1 70 44.3
SGA_v2.0_scaffold10G05247 Striga asiatica HOM05D000034 ORTHO05D000277 3.6e-09 64.7 77 41.6
SGA_v2.0_scaffold13G06465 Striga asiatica HOM05D000034 ORTHO05D000277 4.6e-09 64.3 70 45.7
SGA_v2.0_scaffold16G07755 Striga asiatica HOM05D009666 ORTHO05D011401 3.9e-08 61.2 74 40.5
unitig_899.g14447 Utricularia gibba HOM05D009205 ORTHO05D011401 5.1e-08 60.8 74 40.5
Migut.F01547 Erythranthe guttata HOM05D000034 ORTHO05D000277 1.1e-07 59.7 74 40.5
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 1.1e-07 59.7 85 35.3
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 1.1e-07 59.7 85 36.5
SGA_v2.0_scaffold53G19369 Striga asiatica HOM05D000034 ORTHO05D000277 1.1e-07 59.7 85 36.5
SGA_v2.0_scaffold195G40829 Striga asiatica HOM05D009666 ORTHO05D000277 1.5e-07 59.3 71 39.4
SGA_v2.0_scaffold409G51096 Striga asiatica HOM05D009666 ORTHO05D000277 2.0e-07 58.9 77 40.3
unitig_0.g1909 Utricularia gibba HOM05D018742 ORTHO05D011401 2.6e-07 58.5 54 51.9
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 3.3e-07 58.2 81 34.6
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 3.3e-07 58.2 81 34.6
DCAR_003199 Daucus carota HOM05D000034 ORTHO05D000277 7.4e-07 57.0 59 42.4
DCAR_023746 Daucus carota HOM05D000034 ORTHO05D000277 7.4e-07 57.0 59 42.4
SGA_v2.0_scaffold258G45775 Striga asiatica HOM05D000034 ORTHO05D000277 9.7e-07 56.6 87 35.6
unitig_32.g11213 Utricularia gibba HOM05D009205 ORTHO05D011401 9.7e-07 56.6 54 50.0
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 1.3e-06 56.2 76 36.8
DCAR_008359 Daucus carota HOM05D000034 ORTHO05D000277 1.7e-06 55.8 59 40.7
AUR62041902 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.7e-06 54.7 58 39.7
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 3.7e-06 54.7 76 36.8
RcHm_v2.0_Chr7g0199171 Rosa chinensis HOM05D008011 ORTHO05D000277 4.8e-06 54.3 87 29.9
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 4.8e-06 54.3 67 40.3
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 4.8e-06 54.3 77 32.5
SGA_v2.0_scaffold26G11283 Striga asiatica HOM05D009666 ORTHO05D000277 4.8e-06 54.3 68 39.7
vmacro11101 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.8e-06 54.3 76 34.2
FvH4_5g01520 Fragaria vesca HOM05D008011 ORTHO05D000277 6.3e-06 53.9 87 32.2
FAN18G3785 Fragaria x ananassa HOM05D008011 ORTHO05D000277 6.3e-06 53.9 87 32.2
CSS0036504 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.2e-06 53.5 71 40.8
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.2e-06 53.5 71 40.8
CSS0044841 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.2e-06 53.5 71 40.8
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.2e-06 53.5 71 40.8
AUR62032519 Chenopodium quinoa HOM05D000034 ORTHO05D000277 8.2e-06 53.5 67 38.8
SGA_v2.0_scaffold88G27335 Striga asiatica HOM05D009707 ORTHO05D000277 8.2e-06 53.5 76 36.8


User provided reference genes

Program Settings