Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6081 Utricularia gibba HOM05D003386 ORTHO05D004061 1.7e-51 205.7 102 100.0
Migut.B00624 Erythranthe guttata HOM05D003386 ORTHO05D004061 5.9e-20 100.9 70 75.7
unitig_8.g3472 Utricularia gibba HOM05D003569 ORTHO05D004178 7.8e-20 100.5 70 75.7
Atru.chr4.164 Acer truncatum HOM05D003386 ORTHO05D004061 1.0e-19 100.1 71 73.2
Cfa002693 Carpinus fangiana HOM05D003386 ORTHO05D004061 1.0e-19 100.1 71 73.2
Ciclev10029222m.g Citrus clementina HOM05D003386 ORTHO05D004061 1.0e-19 100.1 71 73.2
Eucgr.I02676 Eucalyptus grandis HOM05D003386 ORTHO05D004061 1.0e-19 100.1 71 73.2
MBI05_g00407_MAGBIO Magnolia biondii HOM05D003386 ORTHO05D004061 1.0e-19 100.1 71 73.2
MBI06_g27496_MAGBIO Magnolia biondii HOM05D003386 ORTHO05D004061 1.0e-19 100.1 71 73.2
QL06p050185 Quercus lobata HOM05D003386 ORTHO05D004061 1.0e-19 100.1 71 73.2
SEGI_14878 Sequoiadendron giganteum HOM05D003386 ORTHO05D004061 1.0e-19 100.1 70 74.3
SGA_v2.0_scaffold45G17309 Striga asiatica HOM05D003386 ORTHO05D004061 1.0e-19 100.1 70 75.7
ATR0564G495 Amborella trichopoda HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 73.2
arahy.Tifrunner.gnm1.ann1.JC4ZCG Arachis hypogaea HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
arahy.Tifrunner.gnm1.ann1.KP3Y1K Arachis hypogaea HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
Cfa005625 Carpinus fangiana HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
Haze_24968 Corylus avellana HOM05D003386 ORTHO05D004061 1.3e-19 99.8 68 75.0
Medtr4g094265 Medicago truncatula HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
Nn1g05283 Nelumbo nucifera HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
Nn5g29041 Nelumbo nucifera HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
PSO133G0027 Papaver somniferum HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
Potri.003G020300 Populus trichocarpa HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
SalBow6G6318 Salvia bowleyana HOM05D003386 ORTHO05D004061 1.3e-19 99.8 70 74.3
TPR.G10437 Trifolium pratense HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
TAR381G0876 Trochodendron aralioides HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
TAR625G0989 Trochodendron aralioides HOM05D003386 ORTHO05D004061 1.3e-19 99.8 71 71.8
CiPaw.05G037800 Carya illinoinensis HOM05D003386 ORTHO05D004061 1.7e-19 99.4 71 70.4
QL11p019866 Quercus lobata HOM05D003386 ORTHO05D004061 1.7e-19 99.4 71 70.4
GSVIVG01029788001 Vitis vinifera HOM05D003386 ORTHO05D004061 1.7e-19 99.4 71 70.4
Cpa.g.sc20.223 Carica papaya HOM05D003386 ORTHO05D004061 2.3e-19 99.0 71 73.2
CDE05G1762 Ceratophyllum demersum HOM05D003386 ORTHO05D004061 2.3e-19 99.0 71 70.4
CDE05G2354 Ceratophyllum demersum HOM05D003386 ORTHO05D004061 2.3e-19 99.0 71 71.8
Nitab4.5_0002865g0030 Nicotiana tabacum HOM05D003386 ORTHO05D004061 2.3e-19 99.0 71 71.8
Nitab4.5_0003434g0020 Nicotiana tabacum HOM05D003386 ORTHO05D004061 2.3e-19 99.0 71 71.8
Psat7g097760 Pisum sativum HOM05D003386 ORTHO05D004061 2.3e-19 99.0 71 70.4
SGA_v2.0_scaffold145G36039 Striga asiatica HOM05D003386 ORTHO05D004061 2.3e-19 99.0 70 74.3
Atru.chr6.1131 Acer truncatum HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 70.4
arahy.Tifrunner.gnm1.ann1.M024AA Arachis hypogaea HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 70.4
arahy.Tifrunner.gnm1.ann1.Q99U9Q Arachis hypogaea HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 70.4
MSTRG.5264 Avicennia marina HOM05D003386 ORTHO05D004061 2.9e-19 98.6 70 72.9
Gohir.A02G132000 Gossypium hirsutum HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 71.8
Gohir.D03G043300 Gossypium hirsutum HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 71.8
PSO063G7399 Papaver somniferum HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 70.4
PSO782G5312 Papaver somniferum HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 70.4
PGR142G1162 Punica granatum HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 71.8
Sabra01G0162100 Salix brachista HOM05D003386 ORTHO05D004061 2.9e-19 98.6 71 71.8
Duzib264G1262 Durio zibethinus HOM05D003386 ORTHO05D004061 3.8e-19 98.2 71 71.8
Hma1.2p1_0522F.1_g171540 Hydrangea macrophylla HOM05D003386 ORTHO05D004061 3.8e-19 98.2 70 72.9
Hma1.2p1_1341F.1_g276850 Hydrangea macrophylla HOM05D003386 ORTHO05D004061 3.8e-19 98.2 70 72.9
PGR102G0128 Punica granatum HOM05D003386 ORTHO05D004061 3.8e-19 98.2 70 72.9
Thecc.01G105400 Theobroma cacao HOM05D003386 ORTHO05D004061 3.8e-19 98.2 71 71.8
Zm00001eb348600 Zea mays HOM05D003386 ORTHO05D004061 3.8e-19 98.2 71 69.0
Lj4g0024201 Lotus japonicus HOM05D003386 ORTHO05D004061 5.0e-19 97.8 70 71.4
Hund06384 Selenicereus undatus HOM05D003386 ORTHO05D004061 5.0e-19 97.8 70 70.0
TWI14G0589 Tripterygium wilfordii HOM05D003386 ORTHO05D004061 5.0e-19 97.8 70 74.3
TWI14G0727 Tripterygium wilfordii HOM05D003386 ORTHO05D004061 5.0e-19 97.8 70 74.3
MSTRG.27790 Avicennia marina HOM05D003386 ORTHO05D004061 6.6e-19 97.4 70 72.9
CANSAT01G2072 Cannabis sativa HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 70.4
CAN.G523.83 Capsicum annuum HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 69.0
Cc02_g21710 Coffea canephora HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 70.4
Glyma.08G073900 Glycine max HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 69.0
Nitab4.5_0000078g0070 Nicotiana tabacum HOM05D003386 ORTHO05D004061 6.6e-19 97.4 70 71.4
Os05g0435700 Oryza sativa ssp. japonica HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 69.0
Phvul.002G207600 Phaseolus vulgaris HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 70.4
Solyc01g105060.3 Solanum lycopersicum HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 70.4
Sopen01g047590 Solanum pennellii HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 70.4
PGSC0003DMG400012564 Solanum tuberosum HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 70.4
GSVIVG01006367001 Vitis vinifera HOM05D003386 ORTHO05D004061 6.6e-19 97.4 71 71.8
Nitab4.5_0001254g0040 Nicotiana tabacum HOM05D003386 ORTHO05D004061 8.6e-19 97.1 70 71.4
Peaxi162Scf00003g03625 Petunia axillaris HOM05D003386 ORTHO05D004061 8.6e-19 97.1 70 71.4
Actinidia28060 Actinidia chinensis HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 70.0
EL10Ac9g21474 Beta vulgaris HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 70.0
CSS0046980 Camellia sinensis var. sinensis HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 70.0
CANSAT11G0561 Cannabis sativa HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 71.4
Glyma.08G179900 Glycine max HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 71.4
Glyma.15G052500 Glycine max HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 71.4
HanXRQChr10g0295971 Helianthus annuus HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 70.0
Peaxi162Scf00001g00026 Petunia axillaris HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 71.4
Sabra03G0011700 Salix brachista HOM05D003386 ORTHO05D004061 1.1e-18 96.7 70 70.0
AL6G20650 Arabidopsis lyrata HOM05D003386 ORTHO05D004061 1.5e-18 96.3 70 71.4
AT5G10160 Arabidopsis thaliana HOM05D003386 ORTHO05D004061 1.5e-18 96.3 70 71.4
Dinv09045 Davidia involucrata HOM05D003386 ORTHO05D004061 1.5e-18 96.3 70 71.4
MD08G1220800 Malus domestica HOM05D003386 ORTHO05D004061 1.5e-18 96.3 71 69.0
MD15G1411500 Malus domestica HOM05D003386 ORTHO05D004061 1.5e-18 96.3 71 69.0
Manes.01G139400 Manihot esculenta HOM05D003386 ORTHO05D004061 1.5e-18 96.3 70 71.4
Oeu007954.1 Olea europaea HOM05D003386 ORTHO05D004061 1.5e-18 96.3 70 70.0
Prupe.1G557700 Prunus persica HOM05D003386 ORTHO05D004061 1.5e-18 96.3 71 69.0
Rhsim11G0136000 Rhododendron simsii HOM05D003386 ORTHO05D004061 1.5e-18 96.3 70 70.0
Sed0010363 Sechium edule HOM05D003386 ORTHO05D004061 1.5e-18 96.3 70 71.4
Ah.01g009650 Amaranthus hybridus HOM05D003386 ORTHO05D004061 1.9e-18 95.9 70 70.0
Carub.0006s0862 Capsella rubella HOM05D003386 ORTHO05D004061 1.9e-18 95.9 70 71.4
Ca_18341_v3 Cicer arietinum L. HOM05D003386 ORTHO05D004061 1.9e-18 95.9 71 67.6
THA.LOC104799058 Tarenaya hassleriana HOM05D003386 ORTHO05D004061 1.9e-18 95.9 70 67.1
Aa31LG3G16980 Aethionema arabicum HOM05D003386 ORTHO05D004061 2.5e-18 95.5 70 71.4
CARHR203130 Cardamine hirsuta HOM05D003386 ORTHO05D004061 2.5e-18 95.5 70 71.4
ClCG07G009490 Citrullus lanatus HOM05D003386 ORTHO05D004061 2.5e-18 95.5 70 70.0
Ciclev10030121m.g Citrus clementina HOM05D003386 ORTHO05D004061 2.5e-18 95.5 71 66.2
Thhalv10014496m.g Eutrema salsugineum HOM05D003386 ORTHO05D004061 2.5e-18 95.5 70 71.4
Lj5C241T2 Lonicera japonica HOM05D003386 ORTHO05D004061 2.5e-18 95.5 70 68.6
Mapoly0022s0038 Marchantia polymorpha HOM05D003386 ORTHO05D004061 2.5e-18 95.5 70 71.4
Phvul.006G207200 Phaseolus vulgaris HOM05D003386 ORTHO05D004061 2.5e-18 95.5 70 70.0
VMungo0540G1300 Vigna mungo HOM05D003386 ORTHO05D004061 3.3e-18 95.1 69 71.0
BcaB01g05546 Brassica carinata HOM05D003386 ORTHO05D004061 4.3e-18 94.7 70 71.4
A02p00360 Brassica napus HOM05D003386 ORTHO05D004061 4.3e-18 94.7 70 70.0
BraA02t05021Z Brassica rapa HOM05D003386 ORTHO05D004061 4.3e-18 94.7 70 70.0
Ca_00128_v3 Cicer arietinum L. HOM05D003386 ORTHO05D004061 4.3e-18 94.7 70 70.0
Sp6g33240 Schrenkiella parvula HOM05D003386 ORTHO05D004061 4.3e-18 94.7 70 70.0
THA.LOC104801700 Tarenaya hassleriana HOM05D003386 ORTHO05D004061 4.3e-18 94.7 70 67.1
A03p04440 Brassica napus HOM05D003386 ORTHO05D004061 5.6e-18 94.4 67 73.1
C03p04930 Brassica napus HOM05D003386 ORTHO05D004061 5.6e-18 94.4 67 73.1
BolC3t13024H Brassica oleracea HOM05D003386 ORTHO05D004061 5.6e-18 94.4 67 73.1
BraA03t09789Z Brassica rapa HOM05D003386 ORTHO05D004061 5.6e-18 94.4 67 73.1
AUR62013121 Chenopodium quinoa HOM05D003386 ORTHO05D004061 5.6e-18 94.4 70 70.0
THA.LOC104818493 Tarenaya hassleriana HOM05D003386 ORTHO05D004061 5.6e-18 94.4 70 67.1
DCAR_021850 Daucus carota HOM05D003386 ORTHO05D004061 7.3e-18 94.0 70 68.6
MD00G1064800 Malus domestica HOM05D003386 ORTHO05D004061 7.3e-18 94.0 71 67.6
MELO3C017583.2 Cucumis melo HOM05D003386 ORTHO05D004061 9.5e-18 93.6 70 68.6
CsaV3_4G004790 Cucumis sativus L. HOM05D003386 ORTHO05D004061 9.5e-18 93.6 70 68.6
Sc14g0002680 Simmondsia chinensis HOM05D003386 ORTHO05D004061 9.5e-18 93.6 71 64.8
TPR.G13597 Trifolium pratense HOM05D003386 ORTHO05D004061 1.2e-17 93.2 70 67.1
Potri.001G209900 Populus trichocarpa HOM05D003386 ORTHO05D004061 1.6e-17 92.8 71 67.6
Dinv24205 Davidia involucrata HOM05D003386 ORTHO05D004061 2.1e-17 92.4 67 68.7
Duzib187G1230 Durio zibethinus HOM05D003386 ORTHO05D004061 2.1e-17 92.4 71 67.6
vmacro01818 Vaccinium macrocarpon HOM05D003386 ORTHO05D004061 2.1e-17 92.4 70 67.1
FvH4_1g21430 Fragaria vesca HOM05D003386 ORTHO05D004061 2.8e-17 92.0 71 64.8
FAN19G2648 Fragaria x ananassa HOM05D003386 ORTHO05D004061 2.8e-17 92.0 71 64.8
FAN23G1173 Fragaria x ananassa HOM05D003386 ORTHO05D004061 2.8e-17 92.0 71 64.8
FAN26G2200 Fragaria x ananassa HOM05D003386 ORTHO05D004061 2.8e-17 92.0 71 64.8
Lsat_1_v5_gn_9_117420 Lactuca sativa HOM05D003386 ORTHO05D004061 2.8e-17 92.0 70 65.7
Prupe.6G180800 Prunus persica HOM05D003386 ORTHO05D004061 2.8e-17 92.0 71 66.2
AL4G11710 Arabidopsis lyrata HOM05D003386 ORTHO05D004061 3.6e-17 91.7 74 63.5
AT2G22230 Arabidopsis thaliana HOM05D003386 ORTHO05D004061 3.6e-17 91.7 74 63.5
BcaB08g35050 Brassica carinata HOM05D003386 ORTHO05D004061 3.6e-17 91.7 71 64.8
C02p04300 Brassica napus HOM05D003386 ORTHO05D004061 3.6e-17 91.7 70 67.1
BolC2t06394H Brassica oleracea HOM05D003386 ORTHO05D004061 3.6e-17 91.7 70 67.1
Carub.0004s0137 Capsella rubella HOM05D003386 ORTHO05D004061 3.6e-17 91.7 74 63.5
Glyma.05G118900 Glycine max HOM05D003386 ORTHO05D004061 3.6e-17 91.7 67 68.7
Medtr2g008620 Medicago truncatula HOM05D003386 ORTHO05D004061 3.6e-17 91.7 67 68.7
CARHR113420 Cardamine hirsuta HOM05D003386 ORTHO05D004061 4.7e-17 91.3 74 63.5
Thhalv10000316m.g Eutrema salsugineum HOM05D003386 ORTHO05D004061 4.7e-17 91.3 74 63.5
RcHm_v2.0_Chr2g0115241 Rosa chinensis HOM05D003386 ORTHO05D004061 4.7e-17 91.3 71 64.8
HanXRQChr03g0066951 Helianthus annuus HOM05D003386 ORTHO05D004061 6.1e-17 90.9 70 65.7
Zm00001eb170970 Zea mays HOM05D003386 ORTHO05D004061 1.0e-16 90.1 71 63.4
Lalb_Chr20g0123071 Lupinus albus HOM05D003386 ORTHO05D004061 1.4e-16 89.7 70 65.7
Os08g0225000 Oryza sativa ssp. japonica HOM05D003386 ORTHO05D004061 1.4e-16 89.7 71 62.0
Sp4g01270 Schrenkiella parvula HOM05D003386 ORTHO05D004061 1.8e-16 89.4 74 60.8
THA.LOC104824866 Tarenaya hassleriana HOM05D003386 ORTHO05D004061 1.8e-16 89.4 71 63.4
COL.COLO4_09922 Corchorus olitorius HOM05D003386 ORTHO05D004061 2.3e-16 89.0 64 71.9
SMO340G0249 Selaginella moellendorffii HOM05D003386 ORTHO05D004061 2.3e-16 89.0 70 67.1
Gorai.003G044400 Gossypium raimondii HOM05D003386 ORTHO05D004061 5.2e-16 87.8 64 70.3
Pp3c24_9920 Physcomitrium patens HOM05D003386 ORTHO05D004061 5.2e-16 87.8 70 62.9
ECA234G2237 Erigeron canadensis HOM05D003386 ORTHO05D004061 6.8e-16 87.4 70 64.3
Pp3c23_11330 Physcomitrium patens HOM05D003386 ORTHO05D004061 8.9e-16 87.0 70 62.9
BraA09t41163Z Brassica rapa HOM05D003386 ORTHO05D004061 1.2e-15 86.7 76 61.8
CSS0042502 Camellia sinensis var. sinensis HOM05D003386 ORTHO05D004061 1.2e-15 86.7 70 64.3
Pp3c14_8480 Physcomitrium patens HOM05D003386 ORTHO05D004061 1.2e-15 86.7 70 62.9
A09p57700 Brassica napus HOM05D003386 ORTHO05D004061 3.4e-15 85.1 76 61.8
Aqoxy6G00575 Aquilegia oxysepala HOM05D003386 ORTHO05D004061 5.8e-15 84.3 69 59.4
CBR_g26519 Chara braunii HOM05D003386 ORTHO05D004061 1.3e-14 83.2 70 58.6
Aqoxy3G02117 Aquilegia oxysepala HOM05D003386 ORTHO05D004061 2.9e-14 82.0 69 59.4
CiPaw.03G139400 Carya illinoinensis HOM05D003386 ORTHO05D004061 6.4e-14 80.9 61 68.9
TWI23G0665 Tripterygium wilfordii HOM05D003386 ORTHO05D004061 8.3e-14 80.5 67 64.2
AagrBONN_evm.TU.Sc2ySwM_362.2717 Anthoceros agrestis HOM05D003386 ORTHO05D004061 1.8e-13 79.3 74 56.8
BcaC02g08725 Brassica carinata HOM05D003386 ORTHO05D004061 1.8e-13 79.3 68 55.9
A04p16740 Brassica napus HOM05D003386 ORTHO05D004061 1.8e-13 79.3 68 55.9
BolC4t26719H Brassica oleracea HOM05D003386 ORTHO05D004061 1.8e-13 79.3 68 55.9
BraA04t17306Z Brassica rapa HOM05D003386 ORTHO05D004061 1.8e-13 79.3 68 55.9
C04p51290 Brassica napus HOM05D003386 ORTHO05D004061 2.4e-13 79.0 68 57.4
AUR62010125 Chenopodium quinoa HOM05D003386 ORTHO05D004061 2.4e-13 79.0 96 53.1
Gohir.A10G085700 Gossypium hirsutum HOM05D003386 ORTHO05D004061 4.1e-13 78.2 71 57.7
Gorai.011G112700 Gossypium raimondii HOM05D003386 ORTHO05D004061 9.2e-13 77.0 71 59.2
Ciclev10026811m.g Citrus clementina HOM05D003386 ORTHO05D004061 1.2e-12 76.6 74 58.1
Gohir.D10G102800 Gossypium hirsutum HOM05D003386 ORTHO05D004061 2.0e-12 75.9 71 57.7
C08p40900 Brassica napus HOM05D003386 ORTHO05D004061 1.0e-11 73.6 56 71.4
RcHm_v2.0_Chr7g0226301 Rosa chinensis HOM05D003386 ORTHO05D004061 2.3e-11 72.4 66 51.5
HPP92_011382 Vanilla planifolia HOM05D003386 ORTHO05D004061 8.6e-11 70.5 61 62.3
CSS0037466 Camellia sinensis var. sinensis HOM05D003386 ORTHO05D004061 3.6e-09 65.1 69 53.6
CARHR113430 Cardamine hirsuta HOM05D003386 ORTHO05D004061 2.6e-07 58.9 61 50.8
C04p51280 Brassica napus HOM05D003386 ORTHO05D042771 3.4e-07 58.5 48 62.5
BolC4t26718H Brassica oleracea HOM05D003386 ORTHO05D042771 3.4e-07 58.5 48 62.5
MCO11G889 Micromonas commoda HOM05D003386 ORTHO05D004061 9.8e-07 57.0 64 39.1
PRCOL_00002661 Prasinoderma coloniale HOM05D003386 ORTHO05D004061 2.2e-06 55.8 68 44.1


User provided reference genes

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