Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 2.1e-83 312.4 167 100.0
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 8.2e-27 124.4 97 68.0
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 2.4e-26 122.9 97 68.0
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 6.9e-26 121.3 99 65.7
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 7.7e-25 117.9 99 64.6
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 1.0e-24 117.5 97 67.0
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 1.7e-24 116.7 94 66.0
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 8.5e-24 114.4 97 64.9
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 8.5e-24 114.4 97 64.9
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 5.5e-23 111.7 97 58.8
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 7.2e-23 111.3 99 56.6
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 1.6e-22 110.2 96 60.4
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.1e-22 109.8 99 60.6
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.1e-22 109.8 99 60.6
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 4.7e-22 108.6 97 56.7
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 4.7e-22 108.6 97 56.7
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 3.0e-21 105.9 101 58.4
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 3.9e-21 105.5 99 60.6
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 6.7e-21 104.8 95 60.0
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 1.1e-20 104.0 99 61.6
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 1.5e-20 103.6 104 55.8
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 4.4e-20 102.1 101 58.4
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 4.4e-20 102.1 101 58.4
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 7.4e-20 101.3 101 58.4
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 7.4e-20 101.3 101 58.4
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 9.7e-20 100.9 101 57.4
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 1.7e-19 100.1 102 55.9
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 1.7e-19 100.1 101 57.4
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 1.7e-19 100.1 101 57.4
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 1.7e-19 100.1 101 57.4
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 1.7e-19 100.1 104 56.7
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 1.7e-19 100.1 102 53.9
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 2.2e-19 99.8 104 55.8
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 2.2e-19 99.8 102 52.9
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 2.2e-19 99.8 89 60.7
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 2.8e-19 99.4 101 57.4
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 2.8e-19 99.4 101 56.4
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 2.8e-19 99.4 103 53.4
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 2.8e-19 99.4 94 57.4
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 2.8e-19 99.4 89 57.3
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 2.8e-19 99.4 101 57.4
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 3.7e-19 99.0 104 53.8
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 3.7e-19 99.0 88 60.2
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 4.8e-19 98.6 102 52.9
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 4.8e-19 98.6 89 59.6
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 4.8e-19 98.6 102 54.9
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 6.3e-19 98.2 102 54.9
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 6.3e-19 98.2 102 54.9
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 8.2e-19 97.8 102 56.9
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 8.2e-19 97.8 89 60.7
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 8.2e-19 97.8 89 56.2
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 1.1e-18 97.4 89 58.4
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 1.1e-18 97.4 102 55.9
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 1.4e-18 97.1 94 53.2
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 1.4e-18 97.1 102 52.0
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 1.4e-18 97.1 101 55.4
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 1.8e-18 96.7 101 55.4
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 1.8e-18 96.7 102 52.9
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 1.8e-18 96.7 94 57.4
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 1.8e-18 96.7 102 53.9
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 2.4e-18 96.3 99 52.5
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 2.4e-18 96.3 103 51.5
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 3.1e-18 95.9 89 57.3
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 4.1e-18 95.5 88 53.4
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 5.3e-18 95.1 101 55.4
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 5.3e-18 95.1 104 54.8
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 5.3e-18 95.1 89 53.9
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 7.0e-18 94.7 102 51.0
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 7.0e-18 94.7 89 57.3
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 9.1e-18 94.4 89 55.1
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 9.1e-18 94.4 89 55.1
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 1.2e-17 94.0 102 53.9
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 1.2e-17 94.0 102 52.9
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 1.6e-17 93.6 104 51.0
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 1.6e-17 93.6 89 55.1
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 1.6e-17 93.6 89 55.1
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 1.6e-17 93.6 102 51.0
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 3.5e-17 92.4 88 56.8
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 3.5e-17 92.4 89 52.8
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 3.5e-17 92.4 102 50.0
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 4.5e-17 92.0 100 50.0
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 4.5e-17 92.0 102 52.9
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 4.5e-17 92.0 99 54.5
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 4.5e-17 92.0 89 53.9
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 4.5e-17 92.0 89 52.8
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 7.7e-17 91.3 89 51.7
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 7.7e-17 91.3 102 51.0
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 2.2e-16 89.7 92 50.0
AT2G27750 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 2.2e-16 89.7 99 49.5
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 2.2e-16 89.7 88 51.1
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 2.9e-16 89.4 89 51.7
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 2.9e-16 89.4 89 51.7
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 2.9e-16 89.4 102 51.0
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 6.5e-16 88.2 97 47.4
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 6.5e-16 88.2 97 47.4
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 6.5e-16 88.2 97 47.4
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 8.5e-16 87.8 94 47.9
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 8.5e-16 87.8 94 47.9
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 8.5e-16 87.8 94 47.9
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 8.5e-16 87.8 97 48.5
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 1.1e-15 87.4 94 47.9
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 3.2e-15 85.9 89 48.3
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 1.4e-13 80.5 99 48.5
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 6.7e-13 78.2 89 47.2
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 8.8e-13 77.8 99 49.5
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 1.3e-11 73.9 103 44.7
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 1.3e-11 73.9 99 47.5
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 2.2e-11 73.2 102 46.1
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 2.2e-11 73.2 89 49.4
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 1.1e-10 70.9 88 45.5
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 1.1e-10 70.9 102 45.1
Nitab4.5_0000047g0220 Nicotiana tabacum HOM05D004638 ORTHO05D005443 1.4e-10 70.5 91 47.3
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 7.0e-10 68.2 83 48.2
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 9.1e-10 67.8 82 46.3
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 2.0e-09 66.6 89 43.8
AUR62039396 Chenopodium quinoa HOM05D004638 ORTHO05D005443 4.5e-09 65.5 89 41.6
Nitab4.5_0000047g0240 Nicotiana tabacum HOM05D004638 ORTHO05D005443 4.5e-09 65.5 71 53.5
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 1.7e-08 63.5 87 41.4
AagrBONN_evm.TU.Sc2ySwM_368.887 Anthoceros agrestis HOM05D004638 ORTHO05D005443 1.7e-08 63.5 80 43.8
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 3.8e-08 62.4 89 41.6
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 3.8e-08 62.4 89 41.6
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 1.1e-07 60.8 75 45.3
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 1.5e-07 60.5 102 40.2
arahy.Tifrunner.gnm1.ann1.XHZZ6B Arachis hypogaea HOM05D004638 ORTHO05D005443 2.5e-07 59.7 101 41.6
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 2.5e-07 59.7 73 45.2
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 3.2e-07 59.3 53 49.1
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 3.2e-07 59.3 89 39.3
Nitab4.5_0000047g0210 Nicotiana tabacum HOM05D004638 ORTHO05D005443 1.2e-06 57.4 92 41.3
Actinidia16422 Actinidia chinensis HOM05D004638 ORTHO05D005443 8.0e-06 54.7 53 54.7


User provided reference genes

Program Settings