Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5966 Utricularia gibba HOM05D004638 ORTHO05D005443 2.9e-91 338.6 173 100.0
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 1.0e-35 154.1 163 57.1
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 1.7e-35 153.3 157 58.6
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 2.7e-33 146.0 152 56.6
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 2.2e-30 136.3 150 54.0
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 6.3e-30 134.8 158 53.2
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 1.1e-26 124.0 171 47.4
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 7.2e-26 121.3 150 52.7
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 1.0e-24 117.5 157 45.9
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 4.8e-22 108.6 174 39.7
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 6.3e-22 108.2 169 43.8
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 8.2e-22 107.8 136 47.8
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.4e-21 107.1 153 45.8
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 1.8e-21 106.7 154 44.2
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 1.8e-21 106.7 185 39.5
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 1.8e-21 106.7 153 41.8
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 2.4e-21 106.3 153 45.1
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.4e-21 106.3 153 45.1
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 2.4e-21 106.3 185 38.4
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.4e-21 106.3 156 43.6
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 3.1e-21 105.9 152 40.8
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 3.1e-21 105.9 158 44.3
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 4.1e-21 105.5 173 41.6
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 4.1e-21 105.5 153 44.4
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 5.3e-21 105.1 153 45.1
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 5.3e-21 105.1 156 41.7
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 5.3e-21 105.1 159 40.9
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 7.0e-21 104.8 150 46.0
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 7.0e-21 104.8 174 39.1
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 7.0e-21 104.8 156 43.6
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 7.0e-21 104.8 191 39.8
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 7.0e-21 104.8 170 40.0
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 9.1e-21 104.4 153 43.8
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 9.1e-21 104.4 167 43.1
HanXRQChr11g0320651 Helianthus annuus HOM05D004638 ORTHO05D005443 1.2e-20 104.0 185 37.3
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 1.2e-20 104.0 157 43.3
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 1.6e-20 103.6 155 41.9
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 2.6e-20 102.8 155 42.6
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 2.6e-20 102.8 157 42.0
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.6e-20 102.8 153 42.5
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 3.5e-20 102.4 158 43.0
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 3.5e-20 102.4 146 41.8
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 4.5e-20 102.1 149 46.3
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 5.9e-20 101.7 170 42.4
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 7.7e-20 101.3 175 37.1
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 7.7e-20 101.3 145 44.1
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 1.0e-19 100.9 183 36.1
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 1.0e-19 100.9 162 42.0
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 1.3e-19 100.5 141 44.7
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 1.3e-19 100.5 165 41.8
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 1.3e-19 100.5 192 37.0
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 1.7e-19 100.1 130 44.6
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 2.9e-19 99.4 142 45.8
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 3.8e-19 99.0 146 40.4
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 5.0e-19 98.6 174 39.7
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 5.0e-19 98.6 159 39.0
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 5.0e-19 98.6 159 39.0
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 6.5e-19 98.2 149 40.9
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 6.5e-19 98.2 149 43.6
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 6.5e-19 98.2 173 37.0
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 6.5e-19 98.2 175 41.7
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 6.5e-19 98.2 166 38.6
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 8.5e-19 97.8 170 38.8
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 8.5e-19 97.8 140 42.1
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 1.1e-18 97.4 172 39.0
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 1.1e-18 97.4 141 41.1
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 1.5e-18 97.1 154 39.6
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 1.9e-18 96.7 153 41.2
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 1.9e-18 96.7 169 42.6
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 2.5e-18 96.3 156 40.4
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 2.5e-18 96.3 156 41.0
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 3.2e-18 95.9 152 41.4
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 4.2e-18 95.5 149 41.6
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 7.2e-18 94.7 162 39.5
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 7.2e-18 94.7 162 38.9
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 9.4e-18 94.4 111 49.5
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 9.4e-18 94.4 157 37.6
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 1.2e-17 94.0 152 42.8
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 1.6e-17 93.6 166 38.6
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 2.1e-17 93.2 173 38.7
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 2.7e-17 92.8 173 37.6
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 2.7e-17 92.8 140 40.7
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 3.6e-17 92.4 160 38.1
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 3.6e-17 92.4 173 39.3
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 3.6e-17 92.4 146 38.4
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 3.6e-17 92.4 155 42.6
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 6.1e-17 91.7 149 41.6
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 6.1e-17 91.7 151 40.4
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 8.0e-17 91.3 172 37.8
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 8.0e-17 91.3 177 38.4
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 2.3e-16 89.7 163 39.3
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 3.0e-16 89.4 157 38.2
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 3.0e-16 89.4 144 39.6
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 4.0e-16 89.0 162 35.8
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 4.0e-16 89.0 169 37.9
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 5.2e-16 88.6 162 38.9
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 5.2e-16 88.6 177 35.6
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 5.2e-16 88.6 177 35.6
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 5.2e-16 88.6 180 38.9
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 5.2e-16 88.6 172 36.0
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 6.8e-16 88.2 152 35.5
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 6.8e-16 88.2 152 35.5
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 6.8e-16 88.2 173 37.6
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 6.8e-16 88.2 178 35.4
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 8.8e-16 87.8 145 41.4
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 8.8e-16 87.8 145 41.4
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 8.8e-16 87.8 152 36.8
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 2.6e-15 86.3 140 41.4
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 3.4e-15 85.9 106 42.5
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 1.3e-14 84.0 145 36.6
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 2.8e-14 82.8 150 38.0
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 8.3e-14 81.3 181 33.7
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 4.1e-13 79.0 128 39.8
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 5.4e-13 78.6 136 38.2
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 2.0e-12 76.6 180 33.9
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 2.7e-12 76.3 164 33.5
Os05g0372200 Oryza sativa ssp. japonica HOM05D004638 ORTHO05D005443 3.5e-12 75.9 148 36.5
Pp3c8_4010 Physcomitrium patens HOM05D004638 ORTHO05D005443 4.5e-12 75.5 124 37.1
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 5.9e-12 75.1 91 50.5
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 1.0e-11 74.3 154 35.1
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 1.3e-11 73.9 201 30.3
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 8.5e-11 71.2 134 35.1
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 1.1e-10 70.9 139 36.7
AagrBONN_evm.TU.Sc2ySwM_368.887 Anthoceros agrestis HOM05D004638 ORTHO05D005443 1.9e-10 70.1 132 37.9
AUR62039395 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.6e-09 67.0 71 45.1
SMO119G0466 Selaginella moellendorffii HOM05D004638 ORTHO05D005443 6.1e-09 65.1 159 29.6
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 3.0e-08 62.8 123 37.4
AUR62014564 Chenopodium quinoa HOM05D004638 ORTHO05D005443 3.0e-08 62.8 172 27.9
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 2.8e-06 56.2 126 35.7


User provided reference genes

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