Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 2.8e-45 184.9 92 100.0
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.7e-37 159.1 91 84.6
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 4.8e-37 157.5 92 82.6
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 6.3e-37 157.1 91 83.5
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 6.3e-37 157.1 91 83.5
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 1.1e-36 156.4 92 82.6
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 1.1e-36 156.4 92 82.6
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 1.4e-36 156.0 92 82.6
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 1.4e-36 156.0 92 82.6
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 1.4e-36 156.0 92 81.5
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 5.3e-36 154.1 88 84.1
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 5.3e-36 154.1 92 80.4
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 9.1e-36 153.3 92 82.6
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.2e-35 152.9 92 77.2
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 1.2e-35 152.9 92 80.4
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 1.6e-35 152.5 88 81.8
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 2.0e-35 152.1 92 79.3
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 3.5e-35 151.4 88 83.0
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 4.5e-35 151.0 92 80.4
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 5.9e-35 150.6 92 80.4
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 5.9e-35 150.6 92 79.3
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 7.7e-35 150.2 92 78.3
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.0e-34 149.8 92 79.3
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 79.3
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 79.3
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 79.3
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 79.3
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 78.3
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 1.3e-34 149.4 88 80.7
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 77.2
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 1.3e-34 149.4 92 79.3
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.7e-34 149.1 92 79.3
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 1.7e-34 149.1 87 82.8
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 2.2e-34 148.7 92 79.3
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 2.2e-34 148.7 92 79.3
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 2.9e-34 148.3 88 80.7
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 3.8e-34 147.9 88 81.8
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 3.8e-34 147.9 88 81.8
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 3.8e-34 147.9 92 79.3
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 5.0e-34 147.5 92 78.3
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 6.5e-34 147.1 89 78.7
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 8.5e-34 146.7 92 76.1
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 8.5e-34 146.7 92 76.1
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 8.5e-34 146.7 92 76.1
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 8.5e-34 146.7 92 78.3
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 8.5e-34 146.7 88 80.7
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 8.5e-34 146.7 92 75.0
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 8.5e-34 146.7 86 82.6
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 1.1e-33 146.4 92 77.2
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 1.9e-33 145.6 92 75.0
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 1.9e-33 145.6 92 75.0
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 1.9e-33 145.6 92 75.0
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 1.9e-33 145.6 92 75.0
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 1.9e-33 145.6 92 77.2
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 2.5e-33 145.2 88 79.5
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 2.5e-33 145.2 92 76.1
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 3.2e-33 144.8 92 77.2
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 4.2e-33 144.4 92 73.9
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 4.2e-33 144.4 90 75.6
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 4.2e-33 144.4 92 75.0
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 4.2e-33 144.4 92 77.2
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 5.5e-33 144.1 88 78.4
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 7.2e-33 143.7 92 73.9
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 7.2e-33 143.7 92 73.9
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 7.2e-33 143.7 92 73.9
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 7.2e-33 143.7 92 73.9
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 7.2e-33 143.7 92 73.9
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 9.4e-33 143.3 92 73.9
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 9.4e-33 143.3 92 73.9
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 9.4e-33 143.3 92 73.9
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 9.4e-33 143.3 88 78.4
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 9.4e-33 143.3 89 76.4
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 2.1e-32 142.1 88 77.3
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 2.1e-32 142.1 88 77.3
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 2.1e-32 142.1 88 77.3
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 2.1e-32 142.1 89 74.2
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 2.1e-32 142.1 84 81.0
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 2.1e-32 142.1 84 81.0
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 2.1e-32 142.1 87 78.2
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 2.7e-32 141.7 87 78.2
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 3.6e-32 141.4 92 77.2
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 4.7e-32 141.0 88 76.1
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 4.7e-32 141.0 92 72.8
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 6.1e-32 140.6 92 72.8
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 6.1e-32 140.6 88 73.9
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 6.1e-32 140.6 88 76.1
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 1.0e-31 139.8 88 72.7
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 1.0e-31 139.8 88 75.0
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 2.3e-31 138.7 88 71.6
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 2.3e-31 138.7 88 71.6
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 2.3e-31 138.7 92 70.7
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 3.0e-31 138.3 92 71.7
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 3.0e-31 138.3 92 71.7
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 5.2e-31 137.5 89 71.9
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 8.8e-31 136.7 88 72.7
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 4.4e-30 134.4 89 76.4
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 2.8e-29 131.7 80 80.0
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 5.3e-28 127.5 135 51.9
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 9.1e-28 126.7 92 67.4
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 9.1e-28 126.7 92 67.4
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.9e-27 124.0 120 56.7
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 6.5e-26 120.6 119 53.8
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 1.9e-25 119.0 144 50.7
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 1.9e-25 119.0 92 67.4
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 1.2e-24 116.3 66 84.8
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 4.0e-23 111.3 66 80.3
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 4.0e-23 111.3 73 71.2
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 5.2e-23 110.9 88 64.8
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 2.6e-22 108.6 66 77.3
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 1.7e-21 105.9 119 53.8
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 2.2e-21 105.5 66 74.2
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 4.8e-21 104.4 94 63.8
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 2.4e-20 102.1 65 73.8
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 1.7e-18 95.9 89 59.6
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.1e-17 93.2 93 52.7
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 1.5e-17 92.8 60 71.7
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 6.1e-16 87.4 56 71.4
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 8.8e-15 83.6 78 48.7
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 8.8e-15 83.6 76 51.3
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 2.8e-13 78.6 69 49.3
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 5.4e-12 74.3 266 26.7
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 9.2e-12 73.6 72 54.2
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 4.5e-11 71.2 72 52.8
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 2.3e-10 68.9 66 57.6
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 2.5e-09 65.5 56 58.9
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 3.6e-08 61.6 69 40.6
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 6.8e-07 57.4 63 46.0
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 4.4e-06 54.7 49 49.0


User provided reference genes

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