Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5711 Utricularia gibba HOM05D006643 ORTHO05D008368 6.0e-129 464.2 230 100.0
Manes.11G122600 Manihot esculenta HOM05D006643 ORTHO05D008368 8.2e-86 320.9 184 85.9
Dinv44177 Davidia involucrata HOM05D006643 ORTHO05D008368 5.3e-85 318.2 184 84.2
Manes.04G044300 Manihot esculenta HOM05D006643 ORTHO05D008368 5.3e-85 318.2 184 85.3
Nitab4.5_0001586g0090 Nicotiana tabacum HOM05D006643 ORTHO05D008368 5.3e-85 318.2 184 83.2
MSTRG.22006 Avicennia marina HOM05D006643 ORTHO05D008368 7.0e-85 317.8 216 76.9
Gorai.005G126600 Gossypium raimondii HOM05D006643 ORTHO05D008368 7.0e-85 317.8 237 72.6
CANSAT78G1363 Cannabis sativa HOM05D006643 ORTHO05D008368 9.1e-85 317.4 184 83.2
Haze_01468 Corylus avellana HOM05D006643 ORTHO05D008368 9.1e-85 317.4 216 75.9
Cfa000631 Carpinus fangiana HOM05D006643 ORTHO05D008368 1.2e-84 317.0 216 75.9
Nitab4.5_0006064g0060 Nicotiana tabacum HOM05D006643 ORTHO05D008368 1.2e-84 317.0 184 83.2
SalBow6G5841 Salvia bowleyana HOM05D006643 ORTHO05D008368 1.2e-84 317.0 216 76.9
PGSC0003DMG400016303 Solanum tuberosum HOM05D006643 ORTHO05D008368 2.0e-84 316.2 184 83.7
SGA_v2.0_scaffold17G08152 Striga asiatica HOM05D006643 ORTHO05D008368 3.5e-84 315.5 216 75.9
Dinv22753 Davidia involucrata HOM05D006643 ORTHO05D008368 4.5e-84 315.1 184 82.6
Glyma.12G051500 Glycine max HOM05D006643 ORTHO05D008368 4.5e-84 315.1 216 75.5
Aqoxy2G04152 Aquilegia oxysepala HOM05D006643 ORTHO05D008368 5.9e-84 314.7 216 74.5
Migut.N03101 Erythranthe guttata HOM05D006643 ORTHO05D008368 5.9e-84 314.7 184 84.2
Glyma.11G126900 Glycine max HOM05D006643 ORTHO05D008368 5.9e-84 314.7 216 75.5
Potri.017G027800 Populus trichocarpa HOM05D006643 ORTHO05D008368 5.9e-84 314.7 184 82.6
Gohir.D02G111600 Gossypium hirsutum HOM05D006643 ORTHO05D008368 1.0e-83 313.9 230 73.0
Oeu034449.1 Olea europaea HOM05D006643 ORTHO05D008368 1.0e-83 313.9 184 82.1
Solyc06g053370.3 Solanum lycopersicum HOM05D006643 ORTHO05D008368 1.0e-83 313.9 184 83.2
Sopen06g018420 Solanum pennellii HOM05D006643 ORTHO05D008368 1.0e-83 313.9 184 83.2
TWI15G0378 Tripterygium wilfordii HOM05D006643 ORTHO05D008368 1.0e-83 313.9 184 82.1
Atru.chr4.1246 Acer truncatum HOM05D006643 ORTHO05D008368 1.3e-83 313.5 216 75.0
Ca_20795_v3 Cicer arietinum L. HOM05D006643 ORTHO05D008368 1.3e-83 313.5 216 74.5
Lsat_1_v5_gn_5_71141 Lactuca sativa HOM05D006643 ORTHO05D008368 1.7e-83 313.2 237 70.0
QL10p050520 Quercus lobata HOM05D006643 ORTHO05D008368 1.7e-83 313.2 221 71.9
Sabra17G0016800 Salix brachista HOM05D006643 ORTHO05D008368 1.7e-83 313.2 184 82.1
CsaV3_6G006800 Cucumis sativus L. HOM05D006643 ORTHO05D008368 2.2e-83 312.8 184 82.6
MBI07_g02895_MAGBIO Magnolia biondii HOM05D006643 ORTHO05D008368 2.2e-83 312.8 184 82.1
VMungo1127G1158 Vigna mungo HOM05D006643 ORTHO05D008368 2.9e-83 312.4 216 74.5
Cpa.g.sc9.302 Carica papaya HOM05D006643 ORTHO05D008368 3.8e-83 312.0 184 80.4
CiPaw.02G053100 Carya illinoinensis HOM05D006643 ORTHO05D008368 3.8e-83 312.0 184 81.5
MELO3C022444.2 Cucumis melo HOM05D006643 ORTHO05D008368 3.8e-83 312.0 184 82.6
Thecc.04G176000 Theobroma cacao HOM05D006643 ORTHO05D008368 5.0e-83 311.6 230 70.4
TAR633G0985 Trochodendron aralioides HOM05D006643 ORTHO05D008368 5.0e-83 311.6 216 72.7
arahy.Tifrunner.gnm1.ann1.C0G1TY Arachis hypogaea HOM05D006643 ORTHO05D008368 6.5e-83 311.2 216 75.5
arahy.Tifrunner.gnm1.ann1.NE1CMA Arachis hypogaea HOM05D006643 ORTHO05D008368 6.5e-83 311.2 216 75.5
Ciclev10021679m.g Citrus clementina HOM05D006643 ORTHO05D008368 6.5e-83 311.2 216 74.1
Peaxi162Scf00184g00072 Petunia axillaris HOM05D006643 ORTHO05D008368 6.5e-83 311.2 218 72.9
CSS0015670 Camellia sinensis var. sinensis HOM05D006643 ORTHO05D008368 8.5e-83 310.8 216 75.0
ClCG06G000950 Citrullus lanatus HOM05D006643 ORTHO05D008368 8.5e-83 310.8 184 82.1
Gohir.A02G093700 Gossypium hirsutum HOM05D006643 ORTHO05D008368 8.5e-83 310.8 230 72.6
Phvul.011G053600 Phaseolus vulgaris HOM05D006643 ORTHO05D008368 8.5e-83 310.8 216 74.5
TPR.G34198 Trifolium pratense HOM05D006643 ORTHO05D008368 8.5e-83 310.8 216 75.0
Psat7g209520 Pisum sativum HOM05D006643 ORTHO05D008368 1.1e-82 310.5 218 74.3
Sed0005729 Sechium edule HOM05D006643 ORTHO05D008368 1.1e-82 310.5 184 82.1
Duzib151G1217 Durio zibethinus HOM05D006643 ORTHO05D008368 1.5e-82 310.1 218 74.3
RcHm_v2.0_Chr2g0172871 Rosa chinensis HOM05D006643 ORTHO05D008368 1.9e-82 309.7 216 74.5
Aa31LG10G13850 Aethionema arabicum HOM05D006643 ORTHO05D008368 2.5e-82 309.3 184 81.0
CAN.G136.18 Capsicum annuum HOM05D006643 ORTHO05D008368 2.5e-82 309.3 185 82.2
Lju682C5T3 Lonicera japonica HOM05D006643 ORTHO05D008368 2.5e-82 309.3 216 72.7
Oeu020509.1 Olea europaea HOM05D006643 ORTHO05D008368 2.5e-82 309.3 184 81.5
EL10Ac3g05986 Beta vulgaris HOM05D006643 ORTHO05D008368 3.2e-82 308.9 218 72.5
Duzib268G1702 Durio zibethinus HOM05D006643 ORTHO05D008368 3.2e-82 308.9 184 81.5
Gohir.D02G012600 Gossypium hirsutum HOM05D006643 ORTHO05D008368 3.2e-82 308.9 184 79.3
Gorai.005G016100 Gossypium raimondii HOM05D006643 ORTHO05D008368 3.2e-82 308.9 184 79.9
Prupe.8G006500 Prunus persica HOM05D006643 ORTHO05D008368 3.2e-82 308.9 216 74.1
Nn7g37598 Nelumbo nucifera HOM05D006643 ORTHO05D008368 4.2e-82 308.5 184 81.5
GSVIVG01010795001 Vitis vinifera HOM05D006643 ORTHO05D008368 4.2e-82 308.5 184 81.5
Nn7g37557 Nelumbo nucifera HOM05D006643 ORTHO05D008368 5.5e-82 308.1 216 72.2
Lalb_Chr03g0026051 Lupinus albus HOM05D006643 ORTHO05D008368 7.2e-82 307.8 216 73.1
DCAR_028434 Daucus carota HOM05D006643 ORTHO05D008368 9.4e-82 307.4 184 81.5
HanXRQChr15g0469161 Helianthus annuus HOM05D006643 ORTHO05D008368 9.4e-82 307.4 218 72.5
Medtr4g067340 Medicago truncatula HOM05D006643 ORTHO05D008368 9.4e-82 307.4 184 82.1
PGR083G2474 Punica granatum HOM05D006643 ORTHO05D008368 9.4e-82 307.4 184 82.1
Rhsim09G0023800 Rhododendron simsii HOM05D006643 ORTHO05D008368 9.4e-82 307.4 229 70.7
CARHR169900 Cardamine hirsuta HOM05D006643 ORTHO05D008368 1.2e-81 307.0 218 73.9
Lj6C78T6 Lonicera japonica HOM05D006643 ORTHO05D008368 1.2e-81 307.0 216 72.2
THA.LOC104802315 Tarenaya hassleriana HOM05D006643 ORTHO05D008368 1.2e-81 307.0 184 80.4
AL5G41440 Arabidopsis lyrata HOM05D006643 ORTHO05D008368 2.1e-81 306.2 184 80.4
Thhalv10006170m.g Eutrema salsugineum HOM05D006643 ORTHO05D008368 2.1e-81 306.2 184 80.4
MD10G1004100 Malus domestica HOM05D006643 ORTHO05D008368 2.1e-81 306.2 216 72.2
Potri.007G130300 Populus trichocarpa HOM05D006643 ORTHO05D008368 2.1e-81 306.2 216 72.7
Gohir.A02G011800 Gossypium hirsutum HOM05D006643 ORTHO05D008368 2.7e-81 305.8 184 78.8
Lalb_Chr01g0003121 Lupinus albus HOM05D006643 ORTHO05D008368 3.6e-81 305.4 216 73.1
FvH4_6g51270 Fragaria vesca HOM05D006643 ORTHO05D008368 6.1e-81 304.7 216 71.8
FAN02G2944 Fragaria x ananassa HOM05D006643 ORTHO05D008368 6.1e-81 304.7 216 71.8
Cc04_g06020 Coffea canephora HOM05D006643 ORTHO05D008368 8.0e-81 304.3 184 81.0
Eucgr.A00099 Eucalyptus grandis HOM05D006643 ORTHO05D008368 8.0e-81 304.3 184 78.3
AT3G59520 Arabidopsis thaliana HOM05D006643 ORTHO05D008368 1.0e-80 303.9 184 79.3
FAN05G3471 Fragaria x ananassa HOM05D006643 ORTHO05D008368 1.0e-80 303.9 216 71.3
FAN14G5370 Fragaria x ananassa HOM05D006643 ORTHO05D008368 1.4e-80 303.5 216 71.3
PSO675G0996 Papaver somniferum HOM05D006643 ORTHO05D008368 1.4e-80 303.5 184 79.9
Sabra07G0106000 Salix brachista HOM05D006643 ORTHO05D008368 1.4e-80 303.5 218 71.1
PSO017G5579 Papaver somniferum HOM05D006643 ORTHO05D008368 3.0e-80 302.4 184 79.3
THA.LOC104803815 Tarenaya hassleriana HOM05D006643 ORTHO05D008368 3.0e-80 302.4 184 78.3
Carub.0005s2625 Capsella rubella HOM05D006643 ORTHO05D008368 5.2e-80 301.6 184 77.7
BraA09t40614Z Brassica rapa HOM05D006643 ORTHO05D008368 6.7e-80 301.2 184 78.8
Hund12018 Selenicereus undatus HOM05D000185 ORTHO05D000105 6.7e-80 301.2 184 79.3
Lalb_Chr19g0138371 Lupinus albus HOM05D006643 ORTHO05D008368 1.2e-79 300.4 218 70.2
Rhsim02G0081600 Rhododendron simsii HOM05D006643 ORTHO05D008368 1.5e-79 300.1 215 69.8
Sp5g03640 Schrenkiella parvula HOM05D006643 ORTHO05D008368 1.5e-79 300.1 184 78.3
AUR62023855 Chenopodium quinoa HOM05D006643 ORTHO05D008368 3.3e-79 298.9 216 71.3
Os01g0895500 Oryza sativa ssp. japonica HOM05D006643 ORTHO05D008368 3.3e-79 298.9 185 78.9
A09p51790 Brassica napus HOM05D006643 ORTHO05D008368 4.4e-79 298.5 218 71.1
FAN09G1035 Fragaria x ananassa HOM05D006643 ORTHO05D008368 5.7e-79 298.1 216 70.4
ATR0743G075 Amborella trichopoda HOM05D006643 ORTHO05D008368 7.5e-79 297.7 216 69.0
C08p34520 Brassica napus HOM05D006643 ORTHO05D008368 7.5e-79 297.7 218 70.6
BolC8t51053H Brassica oleracea HOM05D006643 ORTHO05D008368 7.5e-79 297.7 218 70.6
AUR62002333 Chenopodium quinoa HOM05D006643 ORTHO05D008368 7.5e-79 297.7 216 70.8
HPP92_013566 Vanilla planifolia HOM05D006643 ORTHO05D008368 1.3e-78 297.0 184 77.2
Sc13g0006740 Simmondsia chinensis HOM05D006643 ORTHO05D008368 4.8e-78 295.0 184 77.2
SEGI_39406 Sequoiadendron giganteum HOM05D006643 ORTHO05D008368 1.4e-77 293.5 184 74.5
Zm00001eb365770 Zea mays HOM05D006643 ORTHO05D008368 2.0e-76 289.7 185 75.1
arahy.Tifrunner.gnm1.ann1.T4WUKA Arachis hypogaea HOM05D006643 ORTHO05D008368 2.7e-73 279.3 217 67.7
Mapoly0003s0018 Marchantia polymorpha HOM05D006643 ORTHO05D008368 3.6e-73 278.9 185 71.9
SMO358G0698 Selaginella moellendorffii HOM05D006643 ORTHO05D008368 8.3e-70 267.7 185 64.9
Pp3c18_5250 Physcomitrium patens HOM05D006643 ORTHO05D008368 5.4e-69 265.0 185 68.1
CBR_g12522 Chara braunii HOM05D006643 ORTHO05D008368 2.4e-61 239.6 185 62.7
CBR_g3657 Chara braunii HOM05D006643 ORTHO05D008368 3.5e-60 235.7 185 62.2
SHI23489 Sapria himalayana HOM05D006643 ORTHO05D008368 2.1e-57 226.5 156 72.4
MCO15G668 Micromonas commoda HOM05D006643 ORTHO05D008368 2.9e-46 189.5 175 52.0
ECA233G4748 Erigeron canadensis HOM05D006643 ORTHO05D008368 3.3e-42 176.0 114 77.2
EL10Ac3g05987 Beta vulgaris HOM05D001472 ORTHO05D002655 1.7e-38 163.7 123 69.1
MD03G1281100 Malus domestica HOM05D006643 ORTHO05D008368 3.4e-23 112.8 64 78.1
PRCOL_00000202 Prasinoderma coloniale HOM05D006643 ORTHO05D008368 2.5e-18 96.7 189 36.5
Oeu003367.1 Olea europaea HOM05D006643 ORTHO05D008368 4.5e-15 85.9 146 40.4
BcaC02g10058 Brassica carinata HOM05D006643 ORTHO05D008368 4.6e-12 75.9 88 48.9
Cre01.g050350 Chlamydomonas reinhardtii HOM05D006729 ORTHO05D008502 5.3e-08 62.4 143 27.3
Mapoly0022s0048 Marchantia polymorpha HOM05D006729 ORTHO05D008502 2.0e-07 60.5 196 25.5
arahy.Tifrunner.gnm1.ann1.B8V3X4 Arachis hypogaea HOM05D006729 ORTHO05D008502 3.8e-06 56.2 194 27.8
arahy.Tifrunner.gnm1.ann1.Z8UC8R Arachis hypogaea HOM05D006729 ORTHO05D008502 3.8e-06 56.2 194 27.8
SMO364G0815 Selaginella moellendorffii HOM05D006729 ORTHO05D008502 3.8e-06 56.2 183 29.5
SEGI_10602 Sequoiadendron giganteum HOM05D006729 ORTHO05D008502 3.8e-06 56.2 172 28.5


User provided reference genes

Program Settings