Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5692 Utricularia gibba HOM05D007890 ORTHO05D009945 1.1e-63 246.5 124 100.0
Hma1.2p1_0606F.1_g188050 Hydrangea macrophylla HOM05D007890 ORTHO05D009945 1.5e-17 93.2 97 49.5
Oeu025872.1 Olea europaea HOM05D007890 ORTHO05D009945 2.0e-17 92.8 104 53.8
Solyc11g065680.1 Solanum lycopersicum HOM05D007890 ORTHO05D009945 2.0e-17 92.8 105 48.6
Sopen11g025420 Solanum pennellii HOM05D007890 ORTHO05D009945 2.0e-17 92.8 105 48.6
Dinv36254 Davidia involucrata HOM05D007890 ORTHO05D009945 2.6e-17 92.4 96 54.2
PGSC0003DMG400033336 Solanum tuberosum HOM05D007890 ORTHO05D009945 5.7e-17 91.3 103 48.5
Lj1P329T66 Lonicera japonica HOM05D007890 ORTHO05D009945 1.3e-16 90.1 107 44.9
Migut.N02322 Erythranthe guttata HOM05D007890 ORTHO05D009945 1.7e-16 89.7 95 48.4
vmacro04152 Vaccinium macrocarpon HOM05D007890 ORTHO05D009945 2.8e-16 89.0 98 51.0
MSTRG.17595 Avicennia marina HOM05D007890 ORTHO05D009945 3.7e-16 88.6 109 45.9
Nitab4.5_0002741g0090 Nicotiana tabacum HOM05D007890 ORTHO05D009945 4.8e-16 88.2 97 50.5
Actinidia06910 Actinidia chinensis HOM05D007890 ORTHO05D009945 6.3e-16 87.8 125 42.4
Rhsim13G0220700 Rhododendron simsii HOM05D007890 ORTHO05D009945 1.8e-15 86.3 97 49.5
SalBow5G2971 Salvia bowleyana HOM05D007890 ORTHO05D009945 2.4e-15 85.9 102 47.1
Peaxi162Scf00004g02526 Petunia axillaris HOM05D007890 ORTHO05D009945 3.1e-15 85.5 104 49.0
Lalb_Chr15g0082521 Lupinus albus HOM05D007890 ORTHO05D009945 2.0e-14 82.8 95 46.3
HanXRQChr08g0209341 Helianthus annuus HOM05D007890 ORTHO05D009945 2.7e-14 82.4 92 52.2
GSVIVG01025250001 Vitis vinifera HOM05D007890 ORTHO05D009945 2.7e-14 82.4 96 53.1
Lj6g0024098 Lotus japonicus HOM05D007890 ORTHO05D009945 4.5e-14 81.6 115 45.2
TAR633G1231 Trochodendron aralioides HOM05D007890 ORTHO05D009945 4.5e-14 81.6 100 47.0
TWI32G0791 Tripterygium wilfordii HOM05D007890 ORTHO05D009945 2.2e-13 79.3 108 43.5
QL01p004625 Quercus lobata HOM05D007890 ORTHO05D009945 2.9e-13 79.0 104 46.2
ECA233G3563 Erigeron canadensis HOM05D000013 ORTHO05D004590 8.5e-13 77.4 97 48.5
Eucgr.B03690 Eucalyptus grandis HOM05D007890 ORTHO05D009945 1.1e-12 77.0 105 46.7
Gohir.A05G069600 Gossypium hirsutum HOM05D007890 ORTHO05D009945 1.1e-12 77.0 100 46.0
Gohir.D05G072500 Gossypium hirsutum HOM05D007890 ORTHO05D009945 1.1e-12 77.0 130 40.8
Gorai.009G073500 Gossypium raimondii HOM05D007890 ORTHO05D009945 1.1e-12 77.0 100 46.0
Manes.13G093240 Manihot esculenta HOM05D007890 ORTHO05D009945 1.1e-12 77.0 109 45.9
Ciclev10016956m.g Citrus clementina HOM05D007890 ORTHO05D009945 1.5e-12 76.6 93 49.5
Duzib170G0138 Durio zibethinus HOM05D007890 ORTHO05D009945 1.5e-12 76.6 98 49.0
Potri.001G257400 Populus trichocarpa HOM05D007890 ORTHO05D009945 1.5e-12 76.6 96 45.8
Lsat_1_v5_gn_2_29200 Lactuca sativa HOM05D007890 ORTHO05D009945 2.5e-12 75.9 97 44.3
Glyma.08G336100 Glycine max HOM05D007890 ORTHO05D009945 3.2e-12 75.5 97 42.3
Cfa009778 Carpinus fangiana HOM05D007890 ORTHO05D009945 9.4e-12 73.9 104 43.3
Medtr3g061480 Medicago truncatula HOM05D007890 ORTHO05D009945 9.4e-12 73.9 99 45.5
Phvul.006G062000 Phaseolus vulgaris HOM05D007890 ORTHO05D009945 9.4e-12 73.9 97 43.3
RcHm_v2.0_Chr5g0052301 Rosa chinensis HOM05D007890 ORTHO05D009945 9.4e-12 73.9 102 43.1
MD03G1174000 Malus domestica HOM05D007890 ORTHO05D009945 1.6e-11 73.2 93 44.1
Psat5g163960 Pisum sativum HOM05D007890 ORTHO05D009945 2.1e-11 72.8 98 44.9
Thecc.09G234600 Theobroma cacao HOM05D007890 ORTHO05D009945 2.1e-11 72.8 96 46.9
TPR.G14719 Trifolium pratense HOM05D005961 ORTHO05D007391 2.1e-11 72.8 100 45.0
MD11G1192200 Malus domestica HOM05D007890 ORTHO05D009945 4.7e-11 71.6 92 43.5
FAN21G3432 Fragaria x ananassa HOM05D007890 ORTHO05D009945 6.1e-11 71.2 105 40.0
FAN16G0819 Fragaria x ananassa HOM05D007890 ORTHO05D009945 8.0e-11 70.9 105 40.0
ClCG02G023170 Citrullus lanatus HOM05D007890 ORTHO05D009945 1.0e-10 70.5 91 45.1
FvH4_3g28750 Fragaria vesca HOM05D007890 ORTHO05D009945 1.0e-10 70.5 89 43.8
FAN11G2622 Fragaria x ananassa HOM05D007890 ORTHO05D009945 1.0e-10 70.5 89 43.8
MELO3C014589.2 Cucumis melo HOM05D007890 ORTHO05D009945 1.4e-10 70.1 91 42.9
Atru.chr3.2706 Acer truncatum HOM05D007890 ORTHO05D009945 1.8e-10 69.7 100 42.0
Aqoxy2G00189 Aquilegia oxysepala HOM05D007890 ORTHO05D009945 1.8e-10 69.7 97 41.2
PSO724G0038 Papaver somniferum HOM05D007890 ORTHO05D009945 2.3e-10 69.3 128 39.8
EL10Ac4g10243 Beta vulgaris HOM05D007890 ORTHO05D009945 4.0e-10 68.6 94 39.4
VMungo0540G1907 Vigna mungo HOM05D007890 ORTHO05D009945 6.8e-10 67.8 102 43.1
Sed0013757 Sechium edule HOM05D007890 ORTHO05D009945 8.8e-10 67.4 90 42.2
Ah.06g194130 Amaranthus hybridus HOM05D007890 ORTHO05D009945 1.5e-09 66.6 94 42.6
arahy.Tifrunner.gnm1.ann1.I2HDTW Arachis hypogaea HOM05D007890 ORTHO05D009945 1.5e-09 66.6 96 38.5
CiPaw.13G159700 Carya illinoinensis HOM05D007890 ORTHO05D009945 1.5e-09 66.6 104 39.4
arahy.Tifrunner.gnm1.ann1.SWS7SX Arachis hypogaea HOM05D007890 ORTHO05D009945 2.0e-09 66.2 96 38.5
CsaV3_6G039340 Cucumis sativus L. HOM05D007890 ORTHO05D009945 2.0e-09 66.2 112 36.6
CDE05G2272 Ceratophyllum demersum HOM05D007890 ORTHO05D009945 7.5e-09 64.3 97 40.2
PSO423G0105 Papaver somniferum HOM05D007890 ORTHO05D009945 1.3e-08 63.5 114 41.2
THA.LOC104801952 Tarenaya hassleriana HOM05D007890 ORTHO05D009945 2.2e-08 62.8 90 42.2
CARHR144430 Cardamine hirsuta HOM05D007890 ORTHO05D009945 2.8e-08 62.4 100 41.0
Sabra16G0157400 Salix brachista HOM05D007890 ORTHO05D009945 2.8e-08 62.4 123 33.3
Aa31LG2G8040 Aethionema arabicum HOM05D007890 ORTHO05D009945 4.9e-08 61.6 94 41.5
AT2G01870 Arabidopsis thaliana HOM05D007890 ORTHO05D009945 4.9e-08 61.6 101 35.6
BcaC06g31267 Brassica carinata HOM05D007890 ORTHO05D009945 1.1e-07 60.5 95 43.2
BcaC06g34102 Brassica carinata HOM05D007890 ORTHO05D009945 7.0e-07 57.8 95 41.1
C07p32670 Brassica napus HOM05D001297 ORTHO05D001135 7.0e-07 57.8 95 41.1
BolC7t43788H Brassica oleracea HOM05D001297 ORTHO05D001135 7.0e-07 57.8 95 41.1
AL5G10980 Arabidopsis lyrata HOM05D007890 ORTHO05D009945 1.6e-06 56.6 91 44.0
A06p43960 Brassica napus HOM05D001297 ORTHO05D001135 1.6e-06 56.6 95 40.0
BraA06t27271Z Brassica rapa HOM05D001297 ORTHO05D001135 1.6e-06 56.6 95 40.0
MBI02_g09445_MAGBIO Magnolia biondii HOM05D007890 ORTHO05D009945 1.6e-06 56.6 101 34.7
Sp2g13290 Schrenkiella parvula HOM05D007890 ORTHO05D009945 1.6e-06 56.6 94 42.6
Thhalv10005015m.g Eutrema salsugineum HOM05D007890 ORTHO05D009945 2.0e-06 56.2 96 38.5
Carub.0005s0083 Capsella rubella HOM05D007890 ORTHO05D009945 3.5e-06 55.5 92 39.1


User provided reference genes

Program Settings