Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5628 Utricularia gibba HOM05D000083 ORTHO05D003582 6.6e-134 480.7 245 100.0
SGA_v2.0_scaffold99G29461 Striga asiatica HOM05D000083 ORTHO05D003582 5.7e-93 344.7 259 70.7
SalBow6G1016 Salvia bowleyana HOM05D000083 ORTHO05D003582 2.0e-90 336.3 259 70.7
Lj3C850G18 Lonicera japonica HOM05D000083 ORTHO05D003582 1.7e-89 333.2 262 69.1
Dinv11712 Davidia involucrata HOM05D000083 ORTHO05D003582 9.4e-88 327.4 261 68.6
Oeu027907.6 Olea europaea HOM05D000083 ORTHO05D003582 1.2e-87 327.0 259 68.3
MSTRG.2055 Avicennia marina HOM05D000083 ORTHO05D003582 2.3e-86 322.8 259 68.3
HanXRQChr06g0172001 Helianthus annuus HOM05D000083 ORTHO05D003582 3.0e-86 322.4 265 67.5
Cc00_g03930 Coffea canephora HOM05D000083 ORTHO05D003582 5.1e-86 321.6 260 68.8
Manes.11G101900 Manihot esculenta HOM05D000083 ORTHO05D003582 1.3e-84 317.0 262 66.8
HanXRQChr17g0540841 Helianthus annuus HOM05D000083 ORTHO05D003582 2.8e-84 315.8 264 66.7
DCAR_030398 Daucus carota HOM05D000083 ORTHO05D003582 8.2e-84 314.3 263 63.9
Hma1.2p1_0499F.1_g166780 Hydrangea macrophylla HOM05D000083 ORTHO05D003582 1.1e-83 313.9 277 62.1
Nitab4.5_0002113g0210 Nicotiana tabacum HOM05D000083 ORTHO05D003582 1.1e-83 313.9 260 66.2
Nitab4.5_0011898g0010 Nicotiana tabacum HOM05D000083 ORTHO05D003582 1.4e-83 313.5 260 65.8
Potri.007G070100 Populus trichocarpa HOM05D000083 ORTHO05D003582 4.1e-83 312.0 262 66.4
Solyc11g033270.2 Solanum lycopersicum HOM05D000083 ORTHO05D003582 6.9e-83 311.2 260 64.2
Sopen11g015750 Solanum pennellii HOM05D000083 ORTHO05D003582 6.9e-83 311.2 260 64.2
Atru.chr11.1178 Acer truncatum HOM05D000083 ORTHO05D003582 3.4e-82 308.9 262 66.4
Peaxi162Scf00363g00731 Petunia axillaris HOM05D000083 ORTHO05D003582 3.4e-82 308.9 260 65.4
Lsat_1_v5_gn_3_33541 Lactuca sativa HOM05D000083 ORTHO05D003582 4.5e-82 308.5 268 64.2
Gohir.D01G014300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 5.9e-82 308.1 260 63.8
Gorai.002G016000 Gossypium raimondii HOM05D000083 ORTHO05D003582 5.9e-82 308.1 260 63.8
Potri.005G094200 Populus trichocarpa HOM05D000083 ORTHO05D003582 1.0e-81 307.4 262 65.6
Gohir.A01G013000 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.3e-81 307.0 262 64.1
Gohir.D12G137900 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.3e-81 307.0 260 62.7
Peaxi162Scf01172g00034 Petunia axillaris HOM05D000083 ORTHO05D003582 1.7e-81 306.6 260 63.8
Haze_11721 Corylus avellana HOM05D000083 ORTHO05D003582 2.2e-81 306.2 262 64.1
Cpa.g.sc119.48 Carica papaya HOM05D000083 ORTHO05D003582 2.9e-81 305.8 262 64.5
Gorai.008G149400 Gossypium raimondii HOM05D000083 ORTHO05D003582 2.9e-81 305.8 260 62.7
Sabra05G0078000 Salix brachista HOM05D000083 ORTHO05D003582 3.8e-81 305.4 266 65.4
TAR629G3380 Trochodendron aralioides HOM05D000083 ORTHO05D003582 6.5e-81 304.7 261 63.6
CAN.G624.28 Capsicum annuum HOM05D000083 ORTHO05D003582 1.4e-80 303.5 260 63.1
Thecc.02G160900 Theobroma cacao HOM05D000083 ORTHO05D003582 1.4e-80 303.5 260 63.1
TAR371G0617 Trochodendron aralioides HOM05D000083 ORTHO05D003582 2.5e-80 302.8 261 63.6
Ciclev10030510m.g Citrus clementina HOM05D000083 ORTHO05D003582 4.2e-80 302.0 265 62.6
Sabra07G0058200 Salix brachista HOM05D000083 ORTHO05D003582 9.4e-80 300.8 261 65.1
FAN07G1039 Fragaria x ananassa HOM05D000083 ORTHO05D003582 1.2e-79 300.4 263 64.3
Gohir.A12G134300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 1.2e-79 300.4 260 61.5
Sp3g11740 Schrenkiella parvula HOM05D000083 ORTHO05D003582 1.2e-79 300.4 264 63.3
Sabra07G0058700 Salix brachista HOM05D000083 ORTHO05D003582 1.6e-79 300.1 269 64.3
Duzib248G1611 Durio zibethinus HOM05D000083 ORTHO05D003582 2.1e-79 299.7 260 62.3
FAN17G2779 Fragaria x ananassa HOM05D000083 ORTHO05D003582 2.1e-79 299.7 263 64.3
AL3G25440 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 2.7e-79 299.3 264 63.6
FAN12G3263 Fragaria x ananassa HOM05D000083 ORTHO05D003582 2.7e-79 299.3 263 63.9
AT3G13530 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 3.6e-79 298.9 264 63.6
ClCG10G011890 Citrullus lanatus HOM05D000083 ORTHO05D003582 3.6e-79 298.9 262 61.8
MELO3C024030.2 Cucumis melo HOM05D000083 ORTHO05D003582 3.6e-79 298.9 262 61.5
RcHm_v2.0_Chr4g0446521 Rosa chinensis HOM05D000083 ORTHO05D003582 3.6e-79 298.9 263 63.9
BcaB04g18769 Brassica carinata HOM05D000083 ORTHO05D003582 4.7e-79 298.5 264 63.3
FvH4_4g36790 Fragaria vesca HOM05D000083 ORTHO05D003582 4.7e-79 298.5 263 63.9
CsaV3_3G031470 Cucumis sativus L. HOM05D000083 ORTHO05D003582 6.1e-79 298.1 262 61.1
THA.LOC104822679 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 6.1e-79 298.1 264 63.3
Prupe.1G346000 Prunus persica HOM05D000083 ORTHO05D003582 1.4e-78 297.0 263 62.7
MD13G1006900 Malus domestica HOM05D000083 ORTHO05D003582 1.8e-78 296.6 263 62.7
Carub.0003s1301 Capsella rubella HOM05D000083 ORTHO05D003582 2.3e-78 296.2 264 62.9
Gohir.A03G164300 Gossypium hirsutum HOM05D000083 ORTHO05D003582 3.0e-78 295.8 261 62.1
AUR62017682 Chenopodium quinoa HOM05D000083 ORTHO05D003582 5.2e-78 295.0 261 62.5
Aa31LG10G1090 Aethionema arabicum HOM05D000083 ORTHO05D003582 8.8e-78 294.3 264 62.1
C03p46440 Brassica napus HOM05D000083 ORTHO05D003582 1.1e-77 293.9 264 62.5
BolC3t16908H Brassica oleracea HOM05D000083 ORTHO05D003582 1.1e-77 293.9 264 62.5
CARHR088200 Cardamine hirsuta HOM05D000083 ORTHO05D003582 1.1e-77 293.9 264 62.9
AUR62015218 Chenopodium quinoa HOM05D000083 ORTHO05D003582 1.1e-77 293.9 261 62.1
Rhsim09G0073200 Rhododendron simsii HOM05D000083 ORTHO05D003582 1.5e-77 293.5 265 61.9
Ah.01g012890 Amaranthus hybridus HOM05D000083 ORTHO05D003582 2.0e-77 293.1 261 62.8
GSVIVG01012031001 Vitis vinifera HOM05D000083 ORTHO05D003582 2.0e-77 293.1 261 63.2
BraA03t12978Z Brassica rapa HOM05D000083 ORTHO05D003582 3.3e-77 292.4 264 62.1
A03p38250 Brassica napus HOM05D000083 ORTHO05D003582 4.4e-77 292.0 264 62.1
Gorai.005G210100 Gossypium raimondii HOM05D000083 ORTHO05D003582 7.4e-77 291.2 261 60.9
Sed0020503 Sechium edule HOM05D000083 ORTHO05D003582 7.4e-77 291.2 264 61.4
BcaC01g03989 Brassica carinata HOM05D000083 ORTHO05D003582 9.7e-77 290.8 264 61.7
TWI74G1512 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 9.7e-77 290.8 262 62.6
Aqoxy7G03614 Aquilegia oxysepala HOM05D000083 ORTHO05D003582 1.7e-76 290.0 261 60.2
CiPaw.04G139600 Carya illinoinensis HOM05D000083 ORTHO05D003582 2.2e-76 289.7 262 59.9
Gohir.D02G187600 Gossypium hirsutum HOM05D000083 ORTHO05D003582 2.2e-76 289.7 261 60.9
Lj3g0012190 Lotus japonicus HOM05D000083 ORTHO05D003582 2.2e-76 289.7 265 61.1
Aa31LG8G730 Aethionema arabicum HOM05D000083 ORTHO05D003582 6.3e-76 288.1 264 61.0
Nn7g37822 Nelumbo nucifera HOM05D000083 ORTHO05D003582 6.3e-76 288.1 259 61.0
DCAR_004230 Daucus carota HOM05D000083 ORTHO05D003582 8.2e-76 287.7 263 59.7
Sp3g06890 Schrenkiella parvula HOM05D000083 ORTHO05D003582 8.2e-76 287.7 264 61.4
MD16G1000900 Malus domestica HOM05D000083 ORTHO05D003582 1.1e-75 287.3 263 61.2
ATR0326G043 Amborella trichopoda HOM05D000083 ORTHO05D003582 1.4e-75 287.0 266 59.0
Lalb_Chr03g0024821 Lupinus albus HOM05D000083 ORTHO05D003582 5.3e-75 285.0 265 60.8
EL10Ac9g22930 Beta vulgaris HOM05D000083 ORTHO05D003582 7.0e-75 284.6 244 63.5
CANSAT64G2172 Cannabis sativa HOM05D000083 ORTHO05D003582 7.0e-75 284.6 263 62.0
arahy.Tifrunner.gnm1.ann1.FSDW2L Arachis hypogaea HOM05D000083 ORTHO05D003582 1.2e-74 283.9 263 59.3
TWI53G2094 Tripterygium wilfordii HOM05D000083 ORTHO05D003582 1.2e-74 283.9 262 61.5
arahy.Tifrunner.gnm1.ann1.ZIJB47 Arachis hypogaea HOM05D000083 ORTHO05D003582 1.6e-74 283.5 263 59.3
Sed0024928 Sechium edule HOM05D000083 ORTHO05D003582 1.6e-74 283.5 264 61.4
Eucgr.J00858 Eucalyptus grandis HOM05D000083 ORTHO05D003582 2.0e-74 283.1 265 60.0
THA.LOC104810328 Tarenaya hassleriana HOM05D000083 ORTHO05D003582 2.6e-74 282.7 262 59.9
AT3G07980 Arabidopsis thaliana HOM05D000083 ORTHO05D003582 4.5e-74 282.0 264 59.8
VMungo1383G1323 Vigna mungo HOM05D000083 ORTHO05D003582 4.5e-74 282.0 265 58.9
Lalb_Chr19g0139361 Lupinus albus HOM05D000083 ORTHO05D003582 7.7e-74 281.2 265 60.8
Carub.0003s0756 Capsella rubella HOM05D000083 ORTHO05D003582 1.3e-73 280.4 264 60.6
Glyma.11G101700 Glycine max HOM05D000083 ORTHO05D003582 1.3e-73 280.4 265 58.9
TPR.G32329 Trifolium pratense HOM05D000083 ORTHO05D003582 1.7e-73 280.0 265 60.0
ECA246G2960 Erigeron canadensis HOM05D000083 ORTHO05D003582 2.2e-73 279.6 252 61.5
PSO063G5474 Papaver somniferum HOM05D000083 ORTHO05D003582 2.9e-73 279.3 258 57.8
PSO782G1916 Papaver somniferum HOM05D000083 ORTHO05D003582 2.9e-73 279.3 258 57.4
PGR044G0594 Punica granatum HOM05D000083 ORTHO05D003582 2.9e-73 279.3 263 59.7
Ca_19030_v3 Cicer arietinum L. HOM05D000083 ORTHO05D003582 3.8e-73 278.9 265 58.9
Phvul.011G030800 Phaseolus vulgaris HOM05D000083 ORTHO05D003582 3.8e-73 278.9 265 60.0
AL3G19360 Arabidopsis lyrata HOM05D000083 ORTHO05D003582 8.5e-73 277.7 264 59.5
DCAR_023443 Daucus carota HOM05D000083 ORTHO05D003582 2.5e-72 276.2 260 57.7
Glyma.12G027600 Glycine max HOM05D000083 ORTHO05D003582 3.2e-72 275.8 265 58.1
Medtr4g075410 Medicago truncatula HOM05D000083 ORTHO05D003582 3.2e-72 275.8 264 58.7
Psat7g176440 Pisum sativum HOM05D000083 ORTHO05D003582 5.5e-72 275.0 264 59.1
A03p35590 Brassica napus HOM05D000083 ORTHO05D003582 1.2e-71 273.9 265 59.6
BraA03t12735Z Brassica rapa HOM05D000083 ORTHO05D003582 1.2e-71 273.9 265 59.6
Medtr4g074875 Medicago truncatula HOM05D000083 ORTHO05D003582 1.2e-71 273.9 264 58.7
CARHR082720 Cardamine hirsuta HOM05D000083 ORTHO05D003582 2.7e-71 272.7 264 58.3
C03p43230 Brassica napus HOM05D000083 ORTHO05D003582 3.6e-71 272.3 265 59.2
BolC3t16592H Brassica oleracea HOM05D000083 ORTHO05D003582 3.6e-71 272.3 265 59.2
Thhalv10019902m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 6.1e-71 271.6 264 58.7
Ah.07g198430 Amaranthus hybridus HOM05D005111 ORTHO05D003582 9.7e-69 264.2 262 57.6
Ah.01g001600 Amaranthus hybridus HOM05D000083 ORTHO05D003582 3.7e-68 262.3 261 57.5
Sc06g0007920 Simmondsia chinensis HOM05D000083 ORTHO05D003582 1.1e-67 260.8 260 55.4
Hund24289 Selenicereus undatus HOM05D000083 ORTHO05D003582 8.5e-65 251.1 255 55.7
HPP92_002093 Vanilla planifolia HOM05D000083 ORTHO05D003582 1.9e-64 250.0 259 53.3
BcaB03g11558 Brassica carinata HOM05D000083 ORTHO05D003582 1.0e-62 244.2 267 55.8
QL03p043964 Quercus lobata HOM05D000083 ORTHO05D003582 8.8e-62 241.1 438 38.8
Lalb_Chr10g0095051 Lupinus albus HOM05D000083 ORTHO05D003582 1.3e-60 237.3 262 51.5
Os04g0660500 Oryza sativa ssp. japonica HOM05D000083 ORTHO05D003582 7.0e-59 231.5 258 50.4
BcaB03g11553 Brassica carinata HOM05D000083 ORTHO05D003582 4.5e-58 228.8 274 52.9
SEGI_09729 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 1.0e-57 227.6 262 49.6
vmacro10904 Vaccinium macrocarpon HOM05D000083 ORTHO05D003582 1.8e-54 216.9 335 42.4
Zm00001eb067530 Zea mays HOM05D000083 ORTHO05D003582 6.8e-54 214.9 256 46.9
Actinidia04074 Actinidia chinensis HOM05D000083 ORTHO05D003582 8.3e-52 208.0 225 53.8
Zm00001eb432730 Zea mays HOM05D000083 ORTHO05D003582 8.3e-52 208.0 256 45.3
BcaB04g20987 Brassica carinata HOM05D000083 ORTHO05D003582 4.1e-51 205.7 291 45.0
C01p51560 Brassica napus HOM05D000083 ORTHO05D003582 4.1e-51 205.7 291 45.0
CDE04G1078 Ceratophyllum demersum HOM05D000083 ORTHO05D003582 5.4e-51 205.3 238 50.0
BolC1t05099H Brassica oleracea HOM05D000083 ORTHO05D003582 2.9e-49 199.5 291 44.7
A01p40080 Brassica napus HOM05D000083 ORTHO05D003582 5.0e-49 198.7 275 45.8
Duzib132G0002 Durio zibethinus HOM05D000083 ORTHO05D003582 5.0e-49 198.7 118 80.5
BraA01t04049Z Brassica rapa HOM05D000083 ORTHO05D003582 5.6e-48 195.3 289 43.9
MSTRG.2058 Avicennia marina HOM05D000083 ORTHO05D003582 2.0e-45 186.8 117 80.3
SMO198G0032 Selaginella moellendorffii HOM05D000083 ORTHO05D003582 6.4e-44 181.8 259 41.3
Mapoly0140s0044 Marchantia polymorpha HOM05D000083 ORTHO05D003582 3.2e-43 179.5 268 41.0
DCAR_026911 Daucus carota HOM05D000083 ORTHO05D003582 4.3e-40 169.1 117 69.2
HPP92_002089 Vanilla planifolia HOM05D000083 ORTHO05D003582 2.6e-37 159.8 213 45.1
Migut.E00702 Erythranthe guttata HOM05D000083 ORTHO05D003582 8.3e-36 154.8 116 73.3
Thhalv10019926m.g Eutrema salsugineum HOM05D000083 ORTHO05D003582 1.6e-34 150.6 88 84.1
Pp3c15_11760 Physcomitrium patens HOM05D000083 ORTHO05D003582 1.6e-34 150.6 249 36.5
SEGI_08600 Sequoiadendron giganteum HOM05D000083 ORTHO05D003582 2.3e-33 146.7 112 59.8
CBR_g38927 Chara braunii HOM05D000083 ORTHO05D003582 1.1e-32 144.4 112 58.9
Pp3c15_25040 Physcomitrium patens HOM05D000083 ORTHO05D003582 2.1e-31 140.2 257 39.7
CBR_g66805 Chara braunii HOM05D000083 ORTHO05D003582 1.1e-30 137.9 118 55.1
Pp3c9_25590 Physcomitrium patens HOM05D000083 ORTHO05D003582 5.2e-30 135.6 112 56.2
Actinidia04311 Actinidia chinensis HOM05D000083 ORTHO05D003582 2.0e-29 133.7 115 64.3
Migut.E00701 Erythranthe guttata HOM05D000083 ORTHO05D003582 4.1e-27 125.9 63 95.2
PRCOL_00002034 Prasinoderma coloniale HOM05D000083 ORTHO05D003582 1.5e-24 117.5 114 51.8
SHI17994 Sapria himalayana HOM05D000083 ORTHO05D003582 2.0e-21 107.1 62 80.6
COL.COLO4_08995 Corchorus olitorius HOM05D000083 ORTHO05D003582 2.6e-21 106.7 99 59.6
Cfa022394 Carpinus fangiana HOM05D000083 ORTHO05D003582 2.7e-18 96.7 232 28.4
VMungo1127G2131 Vigna mungo HOM05D000083 ORTHO05D003582 1.9e-16 90.5 104 52.9
SHI17995 Sapria himalayana HOM05D000083 ORTHO05D003582 4.3e-16 89.4 60 63.3
Cre01.g016570 Chlamydomonas reinhardtii HOM05D000083 ORTHO05D003582 1.9e-11 73.9 115 36.5


User provided reference genes

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