Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 3.0e-255 884.8 488 100.0
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 5.0e-125 452.2 495 60.0
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 3.6e-123 446.0 500 59.4
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 1.8e-119 433.7 502 60.0
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 1.0e-114 417.9 449 58.8
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 6.6e-109 398.7 459 56.6
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.5e-108 397.5 460 59.3
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 7.3e-108 395.2 467 58.5
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 7.3e-108 395.2 494 54.9
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 2.8e-107 393.3 434 55.1
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 2.8e-107 393.3 440 59.1
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 4.7e-107 392.5 463 52.5
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 6.8e-106 388.7 504 54.2
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 1.2e-105 387.9 464 52.6
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 4.4e-105 386.0 488 57.0
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 4.4e-105 386.0 445 57.8
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 4.4e-105 386.0 496 56.9
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 2.2e-104 383.6 430 54.2
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 6.4e-104 382.1 431 55.0
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 6.4e-104 382.1 433 59.6
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 1.1e-103 381.3 476 55.9
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 1.4e-103 380.9 432 60.4
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 2.4e-103 380.2 433 57.0
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 2.4e-103 380.2 435 58.4
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 4.1e-103 379.4 462 57.1
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 5.4e-103 379.0 429 59.4
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 7.1e-103 378.6 487 56.5
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 9.2e-103 378.3 462 53.5
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 2.1e-102 377.1 432 55.1
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 2.7e-102 376.7 482 52.5
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 4.6e-102 375.9 473 51.6
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 1.3e-101 374.4 435 58.6
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 1.7e-101 374.0 460 56.5
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 2.3e-101 373.6 441 58.5
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 3.0e-101 373.2 432 57.4
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 6.6e-101 372.1 432 58.8
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 6.6e-101 372.1 435 58.2
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.1e-100 371.3 464 52.6
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 1.9e-100 370.5 435 57.9
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 1.9e-100 370.5 469 55.7
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 2.5e-100 370.2 486 53.5
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 5.6e-100 369.0 432 54.6
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 7.3e-100 368.6 493 48.7
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 1.2e-99 367.9 431 58.2
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.2e-99 367.9 435 53.8
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 2.8e-99 366.7 461 56.8
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 2.8e-99 366.7 455 52.7
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 2.8e-99 366.7 433 58.0
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 4.7e-99 365.9 431 58.5
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 8.1e-99 365.2 446 55.2
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 1.1e-98 364.8 394 60.7
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.4e-98 364.4 434 55.8
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 1.8e-98 364.0 442 58.1
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 1.8e-98 364.0 434 57.6
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 2.3e-98 363.6 433 57.3
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 2.3e-98 363.6 433 57.7
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 2.3e-98 363.6 441 56.9
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.1e-98 363.2 435 58.2
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 3.1e-98 363.2 435 57.0
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 3.1e-98 363.2 455 54.9
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 4.0e-98 362.8 428 56.1
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 5.2e-98 362.5 479 55.5
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 5.2e-98 362.5 479 55.5
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 5.2e-98 362.5 439 56.5
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 1.2e-97 361.3 439 55.8
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 3.4e-97 359.8 428 56.3
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 5.8e-97 359.0 415 57.8
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.9e-95 354.0 387 58.4
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 5.4e-95 352.4 402 58.7
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 9.2e-95 351.7 432 56.9
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 9.2e-95 351.7 435 56.3
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 9.2e-95 351.7 470 54.3
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 7.8e-94 348.6 428 53.0
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 1.0e-93 348.2 461 55.3
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 3.0e-93 346.7 462 55.8
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 5.1e-93 345.9 468 54.7
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 6.6e-93 345.5 476 52.5
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 8.6e-93 345.1 472 55.5
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 1.5e-89 334.3 461 51.2
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 2.0e-89 334.0 432 55.3
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 1.7e-88 330.9 450 49.1
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 6.4e-88 328.9 379 58.8
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 6.4e-88 328.9 434 55.1
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 6.0e-86 322.4 426 55.9
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 1.1e-84 318.2 435 54.5
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 5.6e-84 315.8 667 39.7
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 4.8e-83 312.8 457 49.5
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 4.8e-83 312.8 457 49.5
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 1.5e-81 307.8 449 48.6
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 8.4e-80 302.0 442 50.2
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 2.7e-78 297.0 395 50.1
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.0e-77 295.0 387 49.1
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 3.6e-75 286.6 459 46.0
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 3.4e-73 280.0 294 58.8
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 6.4e-72 275.8 292 55.5
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 1.4e-71 274.6 391 54.0
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 8.7e-69 265.4 293 57.3
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 7.4e-68 262.3 433 49.9
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 7.4e-68 262.3 297 53.9
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 4.5e-65 253.1 287 55.7
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 7.6e-65 252.3 290 53.8
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 2.9e-64 250.4 337 53.4
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 6.5e-64 249.2 358 47.8
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 5.5e-63 246.1 288 53.1
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 3.9e-61 240.0 347 53.0
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 6.7e-61 239.2 434 42.4
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 3.7e-59 233.4 446 43.7
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 8.2e-59 232.3 179 69.3
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 3.3e-52 210.3 339 49.0
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.4e-50 204.9 397 40.6
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 2.9e-48 197.2 625 32.5
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 1.6e-46 191.4 344 50.9
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 1.5e-44 184.9 365 47.4
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 2.6e-44 184.1 511 37.4
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 1.5e-36 158.3 270 50.4
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 8.5e-32 142.5 102 75.5
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 2.0e-28 131.3 413 29.1
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 9.7e-28 129.0 204 42.6
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 2.4e-26 124.4 110 61.8
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 1.1e-23 115.5 86 72.1
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 4.2e-23 113.6 72 80.6
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 5.5e-23 113.2 119 58.8
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 2.7e-22 110.9 242 48.8
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 3.0e-21 107.5 52 92.3
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 8.3e-19 99.4 246 43.9
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 1.8e-18 98.2 99 75.8
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 7.0e-18 96.3 115 65.2
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 1.0e-16 92.4 60 73.3
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.0e-13 82.4 85 55.3
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 6.8e-13 79.7 167 40.1
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.7e-09 67.8 96 51.0
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 1.1e-07 62.4 37 75.7
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 4.3e-07 60.5 63 52.4
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 6.1e-06 56.6 138 29.0


User provided reference genes

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