Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5568 Utricularia gibba HOM05D002253 ORTHO05D002351 4.5e-98 361.3 187 100.0
unitig_10.g29679 Utricularia gibba HOM05D002253 ORTHO05D002351 1.6e-58 229.9 187 68.4
unitig_8.g3977 Utricularia gibba HOM05D002253 ORTHO05D002351 1.6e-58 229.9 187 68.4
SGA_v2.0_scaffold170G38753 Striga asiatica HOM05D002253 ORTHO05D002351 4.4e-21 105.5 168 41.7
SalBow8G5368 Salvia bowleyana HOM05D002253 ORTHO05D002351 4.9e-20 102.1 197 40.1
MSTRG.2245 Avicennia marina HOM05D002253 ORTHO05D002351 8.3e-20 101.3 192 39.6
MSTRG.13521 Avicennia marina HOM05D002253 ORTHO05D002351 1.1e-19 100.9 196 41.3
SalBow8G3108 Salvia bowleyana HOM05D002253 ORTHO05D002351 1.0e-17 94.4 179 38.5
SalBow8G4143 Salvia bowleyana HOM05D002253 ORTHO05D002351 1.0e-17 94.4 179 38.5
TWI31G0181 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 1.7e-17 93.6 185 39.5
ECA233G6013 Erigeron canadensis HOM05D002253 ORTHO05D002351 3.9e-17 92.4 187 36.9
Lsat_1_v5_gn_3_59460 Lactuca sativa HOM05D002253 ORTHO05D002351 6.6e-17 91.7 194 36.6
HanXRQChr17g0552161 Helianthus annuus HOM05D002253 ORTHO05D002351 1.5e-16 90.5 173 39.3
Nitab4.5_0011024g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 1.5e-16 90.5 186 39.8
Cc00_g12390 Coffea canephora HOM05D002253 ORTHO05D002351 2.5e-16 89.7 193 40.4
FvH4_4g27540 Fragaria vesca HOM05D002253 ORTHO05D002351 5.6e-16 88.6 197 35.0
Oeu014307.1 Olea europaea HOM05D002253 ORTHO05D002351 1.2e-15 87.4 163 39.3
Oeu039263.1 Olea europaea HOM05D002253 ORTHO05D002351 1.6e-15 87.0 195 38.5
GSVIVG01011906001 Vitis vinifera HOM05D002253 ORTHO05D002351 1.6e-15 87.0 186 40.3
FAN22G1215 Fragaria x ananassa HOM05D002253 ORTHO05D002351 3.6e-15 85.9 187 37.4
Sopen05g005330 Solanum pennellii HOM05D002253 ORTHO05D002351 3.6e-15 85.9 162 37.7
FAN07G2061 Fragaria x ananassa HOM05D002253 ORTHO05D002351 4.7e-15 85.5 190 35.8
Nitab4.5_0004895g0030 Nicotiana tabacum HOM05D002253 ORTHO05D002351 4.7e-15 85.5 186 37.6
FAN12G2183 Fragaria x ananassa HOM05D002253 ORTHO05D002351 6.2e-15 85.1 184 34.8
Actinidia38380 Actinidia chinensis HOM05D002253 ORTHO05D002351 2.3e-14 83.2 177 33.9
Migut.L01071 Erythranthe guttata HOM05D002253 ORTHO05D002351 3.1e-14 82.8 162 38.3
Oeu027682.1 Olea europaea HOM05D002253 ORTHO05D002351 3.1e-14 82.8 201 34.8
Peaxi162Scf00382g00023 Petunia axillaris HOM05D002253 ORTHO05D002351 4.0e-14 82.4 184 37.0
PGSC0003DMG400012967 Solanum tuberosum HOM05D002253 ORTHO05D002351 5.2e-14 82.0 182 37.9
Rhsim09G0108900 Rhododendron simsii HOM05D002253 ORTHO05D002351 6.8e-14 81.6 184 34.8
Migut.E00330 Erythranthe guttata HOM05D002253 ORTHO05D002351 8.9e-14 81.3 197 38.6
FAN12G1145 Fragaria x ananassa HOM05D002253 ORTHO05D002351 8.9e-14 81.3 184 34.2
HanXRQChr08g0214131 Helianthus annuus HOM05D002253 ORTHO05D002351 2.0e-13 80.1 187 38.0
CSS0039080 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 2.6e-13 79.7 151 37.7
RcHm_v2.0_Chr4g0435381 Rosa chinensis HOM05D002253 ORTHO05D002351 2.6e-13 79.7 186 35.5
TWI79G0250 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 3.4e-13 79.3 185 34.6
MSTRG.831 Avicennia marina HOM05D002253 ORTHO05D002351 9.9e-13 77.8 180 40.0
Dinv21099 Davidia involucrata HOM05D002253 ORTHO05D002351 1.3e-12 77.4 178 38.2
DCAR_030071 Daucus carota HOM05D002253 ORTHO05D002351 1.7e-12 77.0 186 37.1
Cfa018604 Carpinus fangiana HOM05D002253 ORTHO05D002351 3.7e-12 75.9 182 35.7
TAR371G1148 Trochodendron aralioides HOM05D002253 ORTHO05D002351 3.7e-12 75.9 182 35.7
Lj3P1016T15 Lonicera japonica HOM05D002253 ORTHO05D002351 4.9e-12 75.5 176 35.2
Peaxi162Scf00086g00101 Petunia axillaris HOM05D002253 ORTHO05D002351 4.9e-12 75.5 179 34.6
Nn3g17816 Nelumbo nucifera HOM05D002253 ORTHO05D002351 6.4e-12 75.1 177 34.5
TAR629G0720 Trochodendron aralioides HOM05D002253 ORTHO05D002351 8.4e-12 74.7 163 36.8
TWI75G0443 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 1.1e-11 74.3 182 37.9
CSS0015690 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 1.9e-11 73.6 179 35.8
Carub.0001s1308 Capsella rubella HOM05D002253 ORTHO05D002351 2.4e-11 73.2 193 34.7
Cc04_g07200 Coffea canephora HOM05D002253 ORTHO05D002351 2.4e-11 73.2 151 35.8
Hma1.2p1_1001F.1_g246520 Hydrangea macrophylla HOM05D002253 ORTHO05D002351 3.2e-11 72.8 151 37.1
Lsat_1_v5_gn_4_18360 Lactuca sativa HOM05D002253 ORTHO05D002351 3.2e-11 72.8 173 35.3
CSS0050023 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 4.1e-11 72.4 179 35.8
Solyc04g007130.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 4.1e-11 72.4 192 34.4
PGSC0003DMG400015874 Solanum tuberosum HOM05D002253 ORTHO05D002351 4.1e-11 72.4 199 32.2
unitig_52.g17137 Utricularia gibba HOM05D002253 ORTHO05D002351 4.1e-11 72.4 141 42.6
CiPaw.16G064200 Carya illinoinensis HOM05D002253 ORTHO05D002351 5.4e-11 72.0 194 35.6
Sopen04g002220 Solanum pennellii HOM05D002253 ORTHO05D002351 7.1e-11 71.6 192 34.4
CSS0003643 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 1.2e-10 70.9 189 30.7
CiPaw.15G129600 Carya illinoinensis HOM05D002253 ORTHO05D002351 1.2e-10 70.9 164 32.9
Oeu008049.1 Olea europaea HOM05D002253 ORTHO05D002351 1.2e-10 70.9 177 37.3
SalBow4G2594 Salvia bowleyana HOM05D002253 ORTHO05D002351 1.2e-10 70.9 152 37.5
Haze_17470 Corylus avellana HOM05D002253 ORTHO05D002351 1.6e-10 70.5 192 33.9
QL10p025078 Quercus lobata HOM05D002253 ORTHO05D002351 1.6e-10 70.5 164 36.0
TPR.G26279 Trifolium pratense HOM05D002253 ORTHO05D002351 1.6e-10 70.5 186 31.7
Thhalv10008809m.g Eutrema salsugineum HOM05D002253 ORTHO05D002351 2.1e-10 70.1 161 36.0
HanXRQChr12g0364641 Helianthus annuus HOM05D002253 ORTHO05D002351 2.7e-10 69.7 181 34.8
Nitab4.5_0003189g0020 Nicotiana tabacum HOM05D002253 ORTHO05D002351 2.7e-10 69.7 170 33.5
Oeu009782.1 Olea europaea HOM05D002253 ORTHO05D002351 2.7e-10 69.7 159 36.5
AT1G13360 Arabidopsis thaliana HOM05D002253 ORTHO05D002351 3.5e-10 69.3 203 31.5
Cpa.g.sc448.1 Carica papaya HOM05D002253 ORTHO05D002351 3.5e-10 69.3 198 31.8
unitig_26.g10262 Utricularia gibba HOM05D002253 ORTHO05D002351 4.6e-10 68.9 165 32.7
AL1G25110 Arabidopsis lyrata HOM05D002253 ORTHO05D002351 7.8e-10 68.2 162 35.2
DCAR_026730 Daucus carota HOM05D002253 ORTHO05D002351 7.8e-10 68.2 180 31.1
MD16G1043800 Malus domestica HOM05D002253 ORTHO05D002351 7.8e-10 68.2 201 33.8
A06p08400 Brassica napus HOM05D002253 ORTHO05D002351 1.0e-09 67.8 157 35.7
BraA06t24036Z Brassica rapa HOM05D002253 ORTHO05D002351 1.0e-09 67.8 157 35.7
PGSC0003DMG400005716 Solanum tuberosum HOM05D002253 ORTHO05D002351 1.0e-09 67.8 157 35.0
CARHR013740 Cardamine hirsuta HOM05D002253 ORTHO05D002351 1.3e-09 67.4 170 35.3
Duzib268G0137 Durio zibethinus HOM05D002253 ORTHO05D002351 1.3e-09 67.4 181 33.1
C05p09930 Brassica napus HOM05D002253 ORTHO05D002351 1.7e-09 67.0 158 34.8
unitig_22.g6553 Utricularia gibba HOM05D002253 ORTHO05D002351 1.7e-09 67.0 154 34.4
Haze_18660 Corylus avellana HOM05D002253 ORTHO05D002351 2.3e-09 66.6 148 36.5
Rhsim12G0083100 Rhododendron simsii HOM05D002253 ORTHO05D002351 2.3e-09 66.6 179 33.0
Potri.010G126000 Populus trichocarpa HOM05D002253 ORTHO05D002351 3.0e-09 66.2 190 34.7
unitig_27.g25192 Utricularia gibba HOM05D002253 ORTHO05D002351 3.0e-09 66.2 152 35.5
Duzib251G0566 Durio zibethinus HOM05D002253 ORTHO05D002351 3.9e-09 65.9 179 33.5
MBI16_g16414_MAGBIO Magnolia biondii HOM05D002253 ORTHO05D002351 3.9e-09 65.9 123 37.4
Prupe.1G309700 Prunus persica HOM05D002253 ORTHO05D002351 3.9e-09 65.9 197 32.5
QL01p043511 Quercus lobata HOM05D002253 ORTHO05D002351 3.9e-09 65.9 191 34.0
Actinidia14884 Actinidia chinensis HOM05D002253 ORTHO05D002351 5.1e-09 65.5 183 33.3
COL.COLO4_07913 Corchorus olitorius HOM05D002253 ORTHO05D002351 5.1e-09 65.5 181 31.5
Duzib248G1226 Durio zibethinus HOM05D002253 ORTHO05D002351 5.1e-09 65.5 175 33.7
TAR374G0921 Trochodendron aralioides HOM05D002253 ORTHO05D002351 6.6e-09 65.1 195 31.3
Manes.06G069300 Manihot esculenta HOM05D002253 ORTHO05D002351 8.6e-09 64.7 183 36.6
Peaxi162Scf00015g00812 Petunia axillaris HOM05D002253 ORTHO05D002351 8.6e-09 64.7 155 32.9
Sed0022428 Sechium edule HOM05D002253 ORTHO05D002351 8.6e-09 64.7 155 32.9
Gohir.A12G167500 Gossypium hirsutum HOM05D002253 ORTHO05D002351 1.1e-08 64.3 186 34.4
MBI10_g16026_MAGBIO Magnolia biondii HOM05D002253 ORTHO05D002351 1.1e-08 64.3 157 37.6
MD14G1226200 Malus domestica HOM05D002253 ORTHO05D002351 1.1e-08 64.3 152 36.2
Potri.015G054300 Populus trichocarpa HOM05D002253 ORTHO05D002351 1.1e-08 64.3 177 35.0
Actinidia16646 Actinidia chinensis HOM05D002253 ORTHO05D002351 1.5e-08 63.9 180 32.8
BolC5t29733H Brassica oleracea HOM05D002253 ORTHO05D002351 1.5e-08 63.9 158 34.2
Nn4g23814 Nelumbo nucifera HOM05D002253 ORTHO05D002351 1.5e-08 63.9 171 36.3
Phvul.004G158400 Phaseolus vulgaris HOM05D002253 ORTHO05D002351 1.5e-08 63.9 141 39.0
PGSC0003DMG400028789 Solanum tuberosum HOM05D002253 ORTHO05D002351 1.5e-08 63.9 160 35.0
Thecc.02G356300 Theobroma cacao HOM05D002253 ORTHO05D002351 1.5e-08 63.9 182 31.9
CAN.G438.133 Capsicum annuum HOM05D002253 ORTHO05D002351 1.9e-08 63.5 159 34.6
Cfa019788 Carpinus fangiana HOM05D002253 ORTHO05D002351 1.9e-08 63.5 147 38.1
Eucgr.B03018 Eucalyptus grandis HOM05D002253 ORTHO05D002351 1.9e-08 63.5 202 34.7
Nitab4.5_0000057g0330 Nicotiana tabacum HOM05D002253 ORTHO05D002351 1.9e-08 63.5 190 32.6
Nitab4.5_0010492g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 1.9e-08 63.5 161 34.8
Aa31LG1G1510 Aethionema arabicum HOM05D002253 ORTHO05D002351 2.5e-08 63.2 163 34.4
A08p32340 Brassica napus HOM05D002253 ORTHO05D002351 2.5e-08 63.2 165 35.2
BraA08t35157Z Brassica rapa HOM05D002253 ORTHO05D002351 2.5e-08 63.2 165 35.2
Sp1g11860 Schrenkiella parvula HOM05D002253 ORTHO05D002351 2.5e-08 63.2 168 33.9
Dinv09805 Davidia involucrata HOM05D002253 ORTHO05D002351 3.3e-08 62.8 148 35.8
TAR622G0007 Trochodendron aralioides HOM05D002253 ORTHO05D002351 3.3e-08 62.8 182 30.8
Glyma.07G090800 Glycine max HOM05D002253 ORTHO05D002351 4.3e-08 62.4 149 36.9
Nitab4.5_0001194g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 4.3e-08 62.4 156 35.9
Lalb_Chr02g0146041 Lupinus albus HOM05D002253 ORTHO05D002351 5.6e-08 62.0 190 31.1
CiPaw.15G084000 Carya illinoinensis HOM05D002253 ORTHO05D002351 7.3e-08 61.6 186 32.3
Gohir.D09G172900 Gossypium hirsutum HOM05D002253 ORTHO05D002351 7.3e-08 61.6 158 33.5
Nitab4.5_0007985g0040 Nicotiana tabacum HOM05D002253 ORTHO05D002351 7.3e-08 61.6 166 34.3
Solyc06g069150.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 7.3e-08 61.6 159 33.3
THA.LOC104825702 Tarenaya hassleriana HOM05D002253 ORTHO05D002351 7.3e-08 61.6 179 30.2
Aqoxy3G00318 Aquilegia oxysepala HOM05D002253 ORTHO05D002351 9.6e-08 61.2 180 30.6
ClCG05G022790 Citrullus lanatus HOM05D002253 ORTHO05D002351 9.6e-08 61.2 183 32.8
Sopen03g038440 Solanum pennellii HOM05D002253 ORTHO05D002351 9.6e-08 61.2 160 33.1
arahy.Tifrunner.gnm1.ann1.AI2V23 Arachis hypogaea HOM05D002253 ORTHO05D002351 1.2e-07 60.8 151 35.1
CANSAT01G2454 Cannabis sativa HOM05D002253 ORTHO05D002351 1.2e-07 60.8 171 32.2
Glyma.08G040800 Glycine max HOM05D002253 ORTHO05D002351 1.2e-07 60.8 159 35.2
MD06G1215300 Malus domestica HOM05D002253 ORTHO05D002351 1.2e-07 60.8 160 35.0
Solyc03g119610.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 1.2e-07 60.8 157 32.5
Sopen06g026430 Solanum pennellii HOM05D002253 ORTHO05D002351 1.2e-07 60.8 160 32.5
BcaC06g33945 Brassica carinata HOM05D002253 ORTHO05D002351 1.6e-07 60.5 180 31.1
BcaC07g38689 Brassica carinata HOM05D002253 ORTHO05D002351 1.6e-07 60.5 168 33.3
C07p34900 Brassica napus HOM05D002253 ORTHO05D002351 1.6e-07 60.5 180 31.1
C08p16090 Brassica napus HOM05D002253 ORTHO05D002351 1.6e-07 60.5 168 33.3
BolC8t49232H Brassica oleracea HOM05D002253 ORTHO05D002351 1.6e-07 60.5 168 33.3
MELO3C012239.2 Cucumis melo HOM05D002253 ORTHO05D002351 1.6e-07 60.5 185 33.5
Glyma.20G114800 Glycine max HOM05D002253 ORTHO05D002351 1.6e-07 60.5 185 34.1
Nitab4.5_0017241g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 1.6e-07 60.5 163 33.1
Sabra15G0075100 Salix brachista HOM05D002253 ORTHO05D002351 1.6e-07 60.5 156 34.0
FAN08G0576 Fragaria x ananassa HOM05D002253 ORTHO05D002351 2.1e-07 60.1 168 32.7
Gorai.006G194800 Gossypium raimondii HOM05D002253 ORTHO05D002351 2.1e-07 60.1 158 32.9
AL5G14510 Arabidopsis lyrata HOM05D002253 ORTHO05D002351 2.8e-07 59.7 179 34.1
BcaC05g25051 Brassica carinata HOM05D002253 ORTHO05D002351 2.8e-07 59.7 181 33.7
BolC7t44021H Brassica oleracea HOM05D002253 ORTHO05D002351 2.8e-07 59.7 180 31.1
CARHR146830 Cardamine hirsuta HOM05D002253 ORTHO05D002351 3.6e-07 59.3 180 32.2
Sabra10G0095700 Salix brachista HOM05D002253 ORTHO05D002351 3.6e-07 59.3 187 31.0
FvH4_5g12280 Fragaria vesca HOM05D002253 ORTHO05D002351 4.7e-07 58.9 168 32.1
FAN18G0057 Fragaria x ananassa HOM05D002253 ORTHO05D002351 4.7e-07 58.9 168 32.1
FAN18G1637 Fragaria x ananassa HOM05D002253 ORTHO05D002351 4.7e-07 58.9 168 32.1
Medtr1g111060 Medicago truncatula HOM05D002253 ORTHO05D002351 6.2e-07 58.5 181 30.9
Potri.008G119800 Populus trichocarpa HOM05D002253 ORTHO05D002351 6.2e-07 58.5 166 35.5
Prupe.5G220600 Prunus persica HOM05D002253 ORTHO05D002351 6.2e-07 58.5 122 38.5
Sabra08G0090800 Salix brachista HOM05D002253 ORTHO05D002351 6.2e-07 58.5 191 34.0
Sed0004753 Sechium edule HOM05D002253 ORTHO05D002351 1.1e-06 57.8 179 34.1
ClCG04G011180 Citrullus lanatus HOM05D002253 ORTHO05D002351 1.4e-06 57.4 175 33.1
CsaV3_1G006570 Cucumis sativus L. HOM05D002253 ORTHO05D002351 1.4e-06 57.4 173 34.1
Gohir.A13G054900 Gossypium hirsutum HOM05D002253 ORTHO05D002351 1.4e-06 57.4 188 33.0
Gohir.D12G171100 Gossypium hirsutum HOM05D002253 ORTHO05D002351 1.4e-06 57.4 186 33.3
Gorai.008G183700 Gossypium raimondii HOM05D002253 ORTHO05D002351 1.4e-06 57.4 186 33.3
Solyc05g009520.2 Solanum lycopersicum HOM05D002253 ORTHO05D002351 1.4e-06 57.4 84 44.0
VMungo0464G1075 Vigna mungo HOM05D002253 ORTHO05D002351 1.4e-06 57.4 147 34.7
FAN13G2702 Fragaria x ananassa HOM05D002253 ORTHO05D002351 1.8e-06 57.0 167 32.9
Gohir.D13G067100 Gossypium hirsutum HOM05D002253 ORTHO05D002351 1.8e-06 57.0 183 32.2
Hma1.2p1_0061F.1_g034080 Hydrangea macrophylla HOM05D002253 ORTHO05D002351 1.8e-06 57.0 159 32.7
Phvul.002G315700 Phaseolus vulgaris HOM05D002253 ORTHO05D002351 1.8e-06 57.0 154 33.1
VMungo0720G1033 Vigna mungo HOM05D002253 ORTHO05D002351 2.4e-06 56.6 184 31.0
Ca_25451_v3 Cicer arietinum L. HOM05D002253 ORTHO05D002351 3.1e-06 56.2 143 32.2
CsaV3_5G034240 Cucumis sativus L. HOM05D002253 ORTHO05D002351 3.1e-06 56.2 181 33.1
Phvul.007G026700 Phaseolus vulgaris HOM05D002253 ORTHO05D002351 3.1e-06 56.2 162 31.5
Sed0025092 Sechium edule HOM05D002253 ORTHO05D002351 3.1e-06 56.2 144 35.4
Glyma.09G185200 Glycine max HOM05D002253 ORTHO05D002351 4.0e-06 55.8 155 36.1
Gorai.013G076400 Gossypium raimondii HOM05D002253 ORTHO05D002351 4.0e-06 55.8 187 32.6
EL10Ac6g14427 Beta vulgaris HOM05D002253 ORTHO05D002351 5.2e-06 55.5 201 29.4
CAN.G423.8 Capsicum annuum HOM05D002253 ORTHO05D002351 5.2e-06 55.5 158 34.8
MELO3C011565.2 Cucumis melo HOM05D002253 ORTHO05D002351 5.2e-06 55.5 157 31.2
MELO3C002083.2 Cucumis melo HOM05D002253 ORTHO05D002351 6.8e-06 55.1 173 31.2
FAN04G1468 Fragaria x ananassa HOM05D002253 ORTHO05D002351 6.8e-06 55.1 177 31.6
TWI81G0977 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 6.8e-06 55.1 127 36.2
Carub.0005s0370 Capsella rubella HOM05D002253 ORTHO05D002351 8.9e-06 54.7 178 33.1
AUR62035241 Chenopodium quinoa HOM05D002253 ORTHO05D002351 8.9e-06 54.7 180 31.1
Gohir.D11G004801 Gossypium hirsutum HOM05D002253 ORTHO05D002351 8.9e-06 54.7 152 35.5
PGR044G1243 Punica granatum HOM05D002253 ORTHO05D002351 8.9e-06 54.7 179 30.7
Sc04g0006530 Simmondsia chinensis HOM05D002253 ORTHO05D002351 8.9e-06 54.7 178 35.4


User provided reference genes

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