Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 1.5e-203 712.6 361 100.0
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 1.2e-43 181.4 324 42.0
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 3.1e-39 166.8 327 37.9
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 3.2e-36 156.8 345 35.9
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 2.3e-34 150.6 344 36.6
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 5.0e-29 132.9 319 35.7
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.5e-28 130.6 318 33.6
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 3.6e-27 126.7 325 34.8
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 3.3e-25 120.2 320 32.5
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 7.5e-25 119.0 320 32.2
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 2.2e-24 117.5 318 34.9
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 1.4e-23 114.8 360 31.7
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.4e-23 114.8 196 39.8
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 4.1e-23 113.2 326 33.1
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 2.0e-22 110.9 344 30.8
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 2.0e-22 110.9 332 34.0
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 2.0e-22 110.9 340 30.0
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 2.0e-22 110.9 340 30.0
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 3.5e-22 110.2 333 30.9
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 3.5e-22 110.2 331 31.4
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 7.7e-22 109.0 345 33.6
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 1.0e-21 108.6 333 32.4
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 3.8e-21 106.7 326 33.4
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 6.5e-21 105.9 328 33.2
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 6.5e-21 105.9 342 32.5
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 8.5e-21 105.5 346 31.2
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 8.5e-21 105.5 335 31.6
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.1e-20 105.1 343 33.8
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 1.9e-20 104.4 346 30.3
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 2.5e-20 104.0 342 29.5
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 7.2e-20 102.4 340 29.7
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 9.4e-20 102.1 335 34.6
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 1.2e-19 101.7 343 30.9
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 2.1e-19 100.9 337 32.3
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 8.0e-19 99.0 349 30.4
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 1.0e-18 98.6 351 32.2
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.0e-18 98.6 342 32.7
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.4e-18 98.2 330 29.4
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 1.4e-18 98.2 316 32.0
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 1.2e-17 95.1 334 28.1
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 1.5e-17 94.7 329 29.8
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.5e-17 94.7 334 27.5
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.4e-17 93.6 334 26.9
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 3.4e-17 93.6 331 32.0
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.7e-17 92.8 343 28.6
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 5.7e-17 92.8 348 31.6
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 7.5e-17 92.4 334 29.0
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 9.8e-17 92.0 331 29.6
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 1.3e-16 91.7 330 28.5
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 1.7e-16 91.3 333 29.4
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.2e-16 90.9 341 27.9
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 3.7e-16 90.1 332 30.1
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 1.4e-15 88.2 299 31.4
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 1.4e-15 88.2 334 30.8
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 2.4e-15 87.4 349 28.9
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 5.4e-15 86.3 328 28.0
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 1.6e-14 84.7 328 29.3
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 2.0e-14 84.3 354 28.8
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 2.0e-14 84.3 354 28.8
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 3.5e-14 83.6 295 31.2
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 4.5e-14 83.2 192 32.8
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 7.7e-14 82.4 339 28.3
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.0e-13 82.0 348 26.4
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 1.3e-13 81.6 330 29.7
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 2.3e-13 80.9 360 28.6
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 2.9e-13 80.5 330 30.0
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 6.5e-13 79.3 319 30.1
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 8.6e-13 79.0 185 33.5
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 3.2e-12 77.0 333 30.3
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 3.2e-12 77.0 361 26.3
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 3.2e-12 77.0 364 29.4
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 4.2e-12 76.6 184 38.0
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 3.6e-11 73.6 324 28.1
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 4.7e-11 73.2 226 31.0
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 6.1e-11 72.8 347 27.4
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 1.0e-10 72.0 189 33.9
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 2.3e-10 70.9 207 33.8
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 6.8e-10 69.3 234 29.1
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 8.8e-10 68.9 322 28.0
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 8.8e-10 68.9 318 27.7
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 3.4e-09 67.0 325 26.8
Migut.O00875 Erythranthe guttata HOM05D007538 ORTHO05D009464 4.4e-09 66.6 63 55.6
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.4e-09 66.6 326 26.7
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 5.7e-09 66.2 268 30.2
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 2.8e-08 63.9 207 32.9
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 3.7e-08 63.5 324 28.1
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 4.9e-08 63.2 322 27.6
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 1.8e-07 61.2 318 26.7


User provided reference genes

Program Settings