Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 2.2e-88 328.9 165 100.0
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 4.6e-22 108.6 157 49.0
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 1.8e-18 96.7 155 45.8
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 1.7e-16 90.1 163 43.6
unitig_8.g3919 Utricularia gibba HOM05D008113 ORTHO05D009793 4.9e-16 88.6 65 69.2
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 5.5e-15 85.1 158 38.6
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 1.1e-12 77.4 154 37.7
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 1.9e-12 76.6 174 33.9
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.5e-12 76.3 163 38.7
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.5e-12 76.3 163 38.7
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.5e-12 76.3 144 41.0
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 3.3e-12 75.9 153 35.9
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 4.3e-12 75.5 143 41.3
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 7.4e-12 74.7 162 38.3
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 9.6e-12 74.3 159 39.0
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.6e-11 73.6 174 31.0
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.8e-11 72.8 160 36.2
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 2.8e-11 72.8 158 36.7
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 2.8e-11 72.8 166 38.0
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 3.1e-10 69.3 166 35.5
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 5.3e-10 68.6 158 36.7
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 6.9e-10 68.2 156 37.2
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 6.9e-10 68.2 166 34.9
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 6.9e-10 68.2 156 37.2
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 1.2e-09 67.4 166 36.1
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.5e-09 67.0 152 37.5
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.0e-09 66.6 166 36.1
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.0e-09 66.6 92 45.7
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 2.6e-09 66.2 164 33.5
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 3.4e-09 65.9 156 35.9
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 3.4e-09 65.9 167 36.5
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 4.5e-09 65.5 96 45.8
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 4.5e-09 65.5 157 35.0
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 5.8e-09 65.1 154 35.1
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 7.6e-09 64.7 157 35.7
HPP92_014861 Vanilla planifolia HOM05D008113 ORTHO05D009793 7.6e-09 64.7 160 36.2
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 1.0e-08 64.3 164 37.2
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.0e-08 64.3 157 35.7
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 1.3e-08 63.9 155 34.8
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.7e-08 63.5 142 36.6
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 1.7e-08 63.5 142 36.6
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 1.7e-08 63.5 153 38.6
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 2.2e-08 63.2 156 35.9
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.2e-08 63.2 166 34.9
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.2e-08 63.2 156 33.3
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.9e-08 62.8 96 45.8
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 3.8e-08 62.4 151 34.4
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 4.9e-08 62.0 155 36.8
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 4.9e-08 62.0 154 36.4
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 4.9e-08 62.0 138 34.8
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 8.4e-08 61.2 160 33.8
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 8.4e-08 61.2 181 33.7
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 1.4e-07 60.5 158 34.2
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 1.9e-07 60.1 192 32.3
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 2.5e-07 59.7 151 35.1
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 4.2e-07 58.9 107 42.1
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 9.3e-07 57.8 162 33.3
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 2.7e-06 56.2 151 34.4
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 3.5e-06 55.8 172 34.3
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 7.9e-06 54.7 204 31.4


User provided reference genes

Program Settings