Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5457 Utricularia gibba HOM05D003989 ORTHO05D004626 2.6e-115 418.7 205 100.0
unitig_60.g25751 Utricularia gibba HOM05D003989 ORTHO05D004626 7.1e-81 304.3 205 68.8
SGA_v2.0_scaffold1G00618 Striga asiatica HOM05D003989 ORTHO05D004626 1.6e-69 266.5 204 62.3
SGA_v2.0_scaffold138G35226 Striga asiatica HOM05D003989 ORTHO05D004626 6.2e-69 264.6 205 60.5
Migut.D00429 Erythranthe guttata HOM05D003989 ORTHO05D004626 1.3e-63 246.9 204 57.8
Hma1.2p1_0273F.1_g109620 Hydrangea macrophylla HOM05D003989 ORTHO05D004626 2.5e-62 242.7 206 59.7
Oeu063312.1 Olea europaea HOM05D003989 ORTHO05D004626 2.1e-61 239.6 206 57.8
Cc01_g18270 Coffea canephora HOM05D003989 ORTHO05D004626 3.7e-61 238.8 205 56.1
Nitab4.5_0000470g0010 Nicotiana tabacum HOM05D003989 ORTHO05D004626 3.7e-61 238.8 206 57.8
Atru.chr5.1704 Acer truncatum HOM05D003989 ORTHO05D004626 8.2e-61 237.7 206 59.2
Thecc.01G257400 Theobroma cacao HOM05D003989 ORTHO05D004626 1.4e-60 236.9 206 58.3
Solyc09g025250.4 Solanum lycopersicum HOM05D003989 ORTHO05D004626 3.1e-60 235.7 206 57.8
Sopen09g028270 Solanum pennellii HOM05D003989 ORTHO05D004626 3.1e-60 235.7 206 57.8
Sc05g0000580 Simmondsia chinensis HOM05D003989 ORTHO05D004626 6.9e-60 234.6 206 57.3
Manes.12G032900 Manihot esculenta HOM05D003989 ORTHO05D004626 9.0e-60 234.2 206 56.8
CsaV3_7G027030 Cucumis sativus L. HOM05D003989 ORTHO05D004626 1.5e-59 233.4 206 55.8
Duzib211G0528 Durio zibethinus HOM05D003989 ORTHO05D004626 1.5e-59 233.4 206 57.3
Lj1A67G39 Lonicera japonica HOM05D003989 ORTHO05D004626 1.5e-59 233.4 206 57.8
MSTRG.18323 Avicennia marina HOM05D003989 ORTHO05D004626 2.0e-59 233.0 206 56.8
FvH4_2g21360 Fragaria vesca HOM05D003989 ORTHO05D004626 2.6e-59 232.6 204 56.9
MD10G1183600 Malus domestica HOM05D003989 ORTHO05D004626 3.4e-59 232.3 206 55.8
Dinv22401 Davidia involucrata HOM05D003989 ORTHO05D004626 4.5e-59 231.9 206 57.8
vmacro02667 Vaccinium macrocarpon HOM05D003989 ORTHO05D004626 4.5e-59 231.9 206 56.8
PGSC0003DMG400010319 Solanum tuberosum HOM05D003989 ORTHO05D004626 7.6e-59 231.1 207 57.5
Cpa.g.sc50.14 Carica papaya HOM05D003989 ORTHO05D004626 2.2e-58 229.6 206 56.8
Prupe.8G222700 Prunus persica HOM05D003989 ORTHO05D004626 2.2e-58 229.6 206 55.8
Migut.N02208 Erythranthe guttata HOM05D003989 ORTHO05D004626 2.9e-58 229.2 206 56.8
Hma1.2p1_0576F.1_g182030 Hydrangea macrophylla HOM05D003989 ORTHO05D004626 2.9e-58 229.2 206 55.8
MSTRG.17493 Avicennia marina HOM05D003989 ORTHO05D004626 5.0e-58 228.4 204 56.9
EL10As5g23494 Beta vulgaris HOM05D003989 ORTHO05D004626 5.0e-58 228.4 206 54.4
Eucgr.K03258 Eucalyptus grandis HOM05D003989 ORTHO05D004626 5.0e-58 228.4 206 57.3
CiPaw.03G265100 Carya illinoinensis HOM05D003989 ORTHO05D004626 6.5e-58 228.0 211 55.5
CAN.G1147.6 Capsicum annuum HOM05D003989 ORTHO05D004626 8.5e-58 227.6 214 55.1
Potri.002G037900 Populus trichocarpa HOM05D003989 ORTHO05D004626 8.5e-58 227.6 206 54.9
RcHm_v2.0_Chr6g0287951 Rosa chinensis HOM05D003989 ORTHO05D004626 8.5e-58 227.6 204 54.9
Sed0015900 Sechium edule HOM05D003989 ORTHO05D004626 8.5e-58 227.6 206 53.9
DCAR_012550 Daucus carota HOM05D003989 ORTHO05D004626 1.1e-57 227.3 206 56.3
Gohir.D07G155200 Gossypium hirsutum HOM05D003989 ORTHO05D004626 1.4e-57 226.9 204 55.4
Lj5g0003366 Lotus japonicus HOM05D003989 ORTHO05D004626 1.4e-57 226.9 206 55.8
Rhsim01G0262900 Rhododendron simsii HOM05D003989 ORTHO05D004626 1.4e-57 226.9 206 55.3
Hund09614 Selenicereus undatus HOM05D003989 ORTHO05D004626 1.4e-57 226.9 204 55.9
HanXRQChr04g0115141 Helianthus annuus HOM05D003989 ORTHO05D004626 1.9e-57 226.5 206 56.8
Potri.005G225100 Populus trichocarpa HOM05D003989 ORTHO05D004626 2.5e-57 226.1 206 54.4
MD05G1196300 Malus domestica HOM05D003989 ORTHO05D004626 3.2e-57 225.7 206 53.9
Actinidia07300 Actinidia chinensis HOM05D003989 ORTHO05D004626 4.2e-57 225.3 207 56.0
FAN15G1221 Fragaria x ananassa HOM05D003989 ORTHO05D004626 7.2e-57 224.6 212 54.7
Sabra05G0173700 Salix brachista HOM05D003989 ORTHO05D004626 9.3e-57 224.2 206 53.9
ECA236G3729 Erigeron canadensis HOM05D003989 ORTHO05D004626 1.2e-56 223.8 206 55.8
FAN27G0191 Fragaria x ananassa HOM05D003989 ORTHO05D004626 1.6e-56 223.4 212 54.2
PSO210G1270 Papaver somniferum HOM05D003989 ORTHO05D004626 1.6e-56 223.4 206 55.8
PSO832G2594 Papaver somniferum HOM05D003989 ORTHO05D004626 1.6e-56 223.4 206 55.8
MELO3C012749.2 Cucumis melo HOM05D003989 ORTHO05D004626 2.1e-56 223.0 212 53.8
Hund02930 Selenicereus undatus HOM05D003989 ORTHO05D004626 4.6e-56 221.9 206 54.4
TWI75G1341 Tripterygium wilfordii HOM05D003989 ORTHO05D004626 4.6e-56 221.9 206 52.9
FAN20G0664 Fragaria x ananassa HOM05D003989 ORTHO05D004626 6.1e-56 221.5 212 54.2
Gorai.001G177700 Gossypium raimondii HOM05D003989 ORTHO05D004626 6.1e-56 221.5 207 54.6
THA.LOC104815848 Tarenaya hassleriana HOM05D003989 ORTHO05D004626 6.1e-56 221.5 206 53.4
Aqoxy5G00222 Aquilegia oxysepala HOM05D003989 ORTHO05D004626 1.0e-55 220.7 207 54.6
Nn1g02783 Nelumbo nucifera HOM05D003989 ORTHO05D004626 1.0e-55 220.7 212 54.2
Gohir.A07G148900 Gossypium hirsutum HOM05D003989 ORTHO05D004626 1.3e-55 220.3 207 54.6
arahy.Tifrunner.gnm1.ann1.CXB6W4 Arachis hypogaea HOM05D003989 ORTHO05D004626 1.8e-55 219.9 207 56.0
Haze_24640 Corylus avellana HOM05D003989 ORTHO05D004626 2.3e-55 219.5 231 50.6
FAN24G0489 Fragaria x ananassa HOM05D003989 ORTHO05D004626 2.3e-55 219.5 215 53.5
Cfa002434 Carpinus fangiana HOM05D003989 ORTHO05D004626 3.0e-55 219.2 207 55.6
THA.LOC104800868 Tarenaya hassleriana HOM05D003989 ORTHO05D004626 3.9e-55 218.8 209 53.6
Thhalv10008791m.g Eutrema salsugineum HOM05D003989 ORTHO05D004626 5.1e-55 218.4 206 51.0
Thhalv10017243m.g Eutrema salsugineum HOM05D003989 ORTHO05D004626 5.1e-55 218.4 204 51.5
Sp4g13620 Schrenkiella parvula HOM05D003989 ORTHO05D004626 6.7e-55 218.0 204 52.0
COL.COLO4_03876 Corchorus olitorius HOM05D003989 ORTHO05D004626 8.7e-55 217.6 206 53.4
CSS0015006 Camellia sinensis var. sinensis HOM05D003989 ORTHO05D004626 1.1e-54 217.2 206 53.4
Gorai.001G254000 Gossypium raimondii HOM05D003989 ORTHO05D004626 1.1e-54 217.2 206 52.9
SalBow6G3340 Salvia bowleyana HOM05D003989 ORTHO05D004626 1.5e-54 216.9 201 50.2
Ca_09678_v3 Cicer arietinum L. HOM05D003989 ORTHO05D004626 1.9e-54 216.5 206 53.9
BraA03t11012Z Brassica rapa HOM05D003989 ORTHO05D004626 3.3e-54 215.7 204 51.5
Carub.0004s1243 Capsella rubella HOM05D003989 ORTHO05D004626 3.3e-54 215.7 206 51.0
Glyma.12G060500 Glycine max HOM05D003989 ORTHO05D004626 3.3e-54 215.7 206 55.3
TAR636G0965 Trochodendron aralioides HOM05D003989 ORTHO05D004626 4.3e-54 215.3 207 52.7
BcaC01g05976 Brassica carinata HOM05D003989 ORTHO05D004626 5.7e-54 214.9 204 51.0
C03p20540 Brassica napus HOM05D003989 ORTHO05D004626 5.7e-54 214.9 204 51.0
BolC3t14434H Brassica oleracea HOM05D003989 ORTHO05D004626 5.7e-54 214.9 204 51.0
BraA08t35517Z Brassica rapa HOM05D003989 ORTHO05D004626 7.4e-54 214.5 206 51.5
CSS0015513 Camellia sinensis var. sinensis HOM05D003989 ORTHO05D004626 7.4e-54 214.5 206 54.9
BcaB01g04061 Brassica carinata HOM05D003989 ORTHO05D004626 9.7e-54 214.2 204 51.0
BraA10t42752Z Brassica rapa HOM05D003989 ORTHO05D004626 9.7e-54 214.2 206 50.5
MBI10_g23171_MAGBIO Magnolia biondii HOM05D003989 ORTHO05D004626 9.7e-54 214.2 207 53.6
CANSAT01G0960 Cannabis sativa HOM05D003989 ORTHO05D004626 1.3e-53 213.8 206 51.0
SGA_v2.0_scaffold2G00880 Striga asiatica HOM05D003989 ORTHO05D004626 1.3e-53 213.8 204 51.0
CARHR124740 Cardamine hirsuta HOM05D003989 ORTHO05D004626 1.6e-53 213.4 206 51.9
C05p04520 Brassica napus HOM05D003989 ORTHO05D004626 2.2e-53 213.0 206 50.0
Psat6g041800 Pisum sativum HOM05D003989 ORTHO05D004626 2.8e-53 212.6 206 52.9
AL1G16180 Arabidopsis lyrata HOM05D003989 ORTHO05D004626 3.7e-53 212.2 206 49.5
AT2G31140 Arabidopsis thaliana HOM05D003989 ORTHO05D004626 3.7e-53 212.2 206 51.0
CARHR005730 Cardamine hirsuta HOM05D003989 ORTHO05D004626 3.7e-53 212.2 206 49.5
Peaxi162Scf01280g00015 Petunia axillaris HOM05D003989 ORTHO05D004626 3.7e-53 212.2 175 58.3
Sabra02G0030600 Salix brachista HOM05D003989 ORTHO05D004626 3.7e-53 212.2 229 48.0
TPR.G23970 Trifolium pratense HOM05D003989 ORTHO05D004626 4.8e-53 211.8 206 52.9
BcaB03g13432 Brassica carinata HOM05D003989 ORTHO05D004626 6.3e-53 211.5 207 50.7
Carub.0001s0556 Capsella rubella HOM05D003989 ORTHO05D004626 6.3e-53 211.5 207 49.8
vmacro14818 Vaccinium macrocarpon HOM05D003989 ORTHO05D004626 6.3e-53 211.5 205 52.7
Sp1g05010 Schrenkiella parvula HOM05D003989 ORTHO05D004626 8.2e-53 211.1 206 51.0
CDE04G0538 Ceratophyllum demersum HOM05D001473 ORTHO05D003900 1.1e-52 210.7 206 51.0
ClCG09G008040 Citrullus lanatus HOM05D003989 ORTHO05D004626 1.8e-52 209.9 255 46.7
AL4G26330 Arabidopsis lyrata HOM05D003989 ORTHO05D004626 2.4e-52 209.5 206 51.0
BcaB02g06815 Brassica carinata HOM05D003989 ORTHO05D004626 2.4e-52 209.5 206 50.0
Lalb_Chr21g0313881 Lupinus albus HOM05D003989 ORTHO05D004626 2.4e-52 209.5 204 53.4
Os04g0102600 Oryza sativa ssp. japonica HOM05D003989 ORTHO05D004626 3.1e-52 209.1 207 52.7
DCAR_018490 Daucus carota HOM05D003989 ORTHO05D004626 4.1e-52 208.8 205 52.2
ATR0736G179 Amborella trichopoda HOM05D003989 ORTHO05D004626 6.9e-52 208.0 207 54.6
Phvul.007G192500 Phaseolus vulgaris HOM05D003989 ORTHO05D004626 6.9e-52 208.0 206 52.9
GSVIVG01028345001 Vitis vinifera HOM05D003989 ORTHO05D004626 6.9e-52 208.0 245 46.9
AT1G06200 Arabidopsis thaliana HOM05D003989 ORTHO05D004626 1.2e-51 207.2 204 48.5
Lalb_Chr06g0170491 Lupinus albus HOM05D003989 ORTHO05D004626 1.5e-51 206.8 204 52.9
Medtr1g069900 Medicago truncatula HOM05D003989 ORTHO05D004626 3.4e-51 205.7 206 50.5
BolC5t29223H Brassica oleracea HOM05D003989 ORTHO05D004626 4.5e-51 205.3 219 47.5
A08p36100 Brassica napus HOM05D003989 ORTHO05D004626 5.9e-51 204.9 215 49.3
Lj2A1151T33 Lonicera japonica HOM05D003989 ORTHO05D004626 7.7e-51 204.5 175 54.9
TWI12G0613 Tripterygium wilfordii HOM05D003989 ORTHO05D004626 1.3e-50 203.8 204 50.0
C08p02410 Brassica napus HOM05D003989 ORTHO05D004626 5.0e-50 201.8 215 48.4
TAR633G0447 Trochodendron aralioides HOM05D003989 ORTHO05D004626 6.5e-50 201.4 188 53.7
Zm00001eb089650 Zea mays HOM05D003989 ORTHO05D004626 1.1e-49 200.7 207 50.7
Ciclev10022360m.g Citrus clementina HOM05D003989 ORTHO05D004626 2.5e-49 199.5 182 52.7
Rhsim13G0035500 Rhododendron simsii HOM05D003989 ORTHO05D004626 3.2e-49 199.1 192 53.6
TAR362G1008 Trochodendron aralioides HOM05D003989 ORTHO05D004626 3.2e-49 199.1 188 54.3
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 4.2e-49 198.7 190 54.2
AUR62024686 Chenopodium quinoa HOM05D003989 ORTHO05D004626 9.4e-49 197.6 175 53.7
HPP92_008957 Vanilla planifolia HOM05D003989 ORTHO05D004626 9.4e-49 197.6 206 50.5
Medtr1g069870 Medicago truncatula HOM05D003989 ORTHO05D004626 1.2e-48 197.2 206 50.0
Glyma.13G123800 Glycine max HOM05D003989 ORTHO05D004626 3.6e-48 195.7 209 51.7
CiPaw.04G187100 Carya illinoinensis HOM05D003989 ORTHO05D004626 6.1e-48 194.9 203 48.3
BcaC05g24296 Brassica carinata HOM05D003989 ORTHO05D004626 3.0e-47 192.6 179 50.8
CDE04G0232 Ceratophyllum demersum HOM05D003989 ORTHO05D004626 2.0e-46 189.9 206 47.1
QL09p039095 Quercus lobata HOM05D003989 ORTHO05D004626 4.4e-46 188.7 303 37.3
Aa31LG5G5780 Aethionema arabicum HOM05D003989 ORTHO05D004626 3.1e-44 182.6 175 49.7
Gohir.D07G219600 Gossypium hirsutum HOM05D003989 ORTHO05D004626 3.1e-44 182.6 206 47.1
Gohir.A07G213400 Gossypium hirsutum HOM05D003989 ORTHO05D004626 9.1e-44 181.0 206 46.6
ATR0736G119 Amborella trichopoda HOM05D003989 ORTHO05D004626 1.5e-43 180.3 202 50.5
AUR62011843 Chenopodium quinoa HOM05D003989 ORTHO05D004626 4.5e-43 178.7 206 45.1
Lsat_1_v5_gn_8_92701 Lactuca sativa HOM05D003989 ORTHO05D004626 1.7e-42 176.8 146 60.3
SMO238G0041 Selaginella moellendorffii HOM05D003989 ORTHO05D004626 2.9e-42 176.0 195 43.1
Zm00001eb418960 Zea mays HOM05D003989 ORTHO05D004626 5.0e-42 175.3 232 44.4
COL.COLO4_04036 Corchorus olitorius HOM05D003989 ORTHO05D004626 1.1e-38 164.1 184 46.2
Pp3c12_14220 Physcomitrium patens HOM05D003989 ORTHO05D004626 1.1e-38 164.1 204 42.2
Pp3c3_23160 Physcomitrium patens HOM05D003989 ORTHO05D004626 2.0e-38 163.3 202 41.6
Mapoly0108s0055 Marchantia polymorpha HOM05D003989 ORTHO05D004626 5.7e-38 161.8 195 43.6
Oeu025856.1 Olea europaea HOM05D003989 ORTHO05D004626 1.4e-36 157.1 125 62.4
Actinidia09544 Actinidia chinensis HOM05D003989 ORTHO05D004626 4.1e-36 155.6 121 62.0
EL10Ac3g04998 Beta vulgaris HOM05D003989 ORTHO05D004626 2.9e-34 149.4 199 42.2
CBR_g23031 Chara braunii HOM05D003989 ORTHO05D004626 2.5e-33 146.4 205 39.5
Hund03044 Selenicereus undatus HOM05D003989 ORTHO05D004626 9.4e-33 144.4 196 42.3
AUR62002143 Chenopodium quinoa HOM05D003989 ORTHO05D004626 6.1e-32 141.7 178 41.6
Actinidia30162 Actinidia chinensis HOM05D003989 ORTHO05D004626 1.4e-31 140.6 143 49.0
Ah.13g072470 Amaranthus hybridus HOM05D003989 ORTHO05D004626 1.4e-31 140.6 154 44.8
AUR62015563 Chenopodium quinoa HOM05D003989 ORTHO05D004626 1.4e-31 140.6 178 41.6
Nitab4.5_0005001g0020 Nicotiana tabacum HOM05D003989 ORTHO05D004626 1.8e-31 140.2 137 51.1
Carub.0007s3141 Capsella rubella HOM05D003989 ORTHO05D004626 5.2e-31 138.7 120 55.0
AUR62015565 Chenopodium quinoa HOM05D003989 ORTHO05D004626 6.7e-31 138.3 185 43.2
EL10Ac3g05001 Beta vulgaris HOM05D003989 ORTHO05D004626 8.8e-31 137.9 173 42.8
Hund03045 Selenicereus undatus HOM05D003989 ORTHO05D004626 1.3e-29 134.0 199 41.7
SEGI_09904 Sequoiadendron giganteum HOM05D003989 ORTHO05D004626 4.1e-28 129.0 145 45.5
Medtr1g069890 Medicago truncatula HOM05D003989 ORTHO05D004626 5.3e-28 128.6 120 55.8
PGR044G1132 Punica granatum HOM05D003989 ORTHO05D004626 1.2e-27 127.5 144 45.1
AagrBONN_evm.TU.Sc2ySwM_228.3815 Anthoceros agrestis HOM05D003989 ORTHO05D004626 1.3e-18 97.4 142 36.6
MCO11G084 Micromonas commoda HOM05D003989 ORTHO05D004626 1.7e-18 97.1 148 36.5
Cre16.g694703 Chlamydomonas reinhardtii HOM05D003989 ORTHO05D004626 1.5e-17 94.0 143 37.8
BcaB06g28424 Brassica carinata HOM05D003989 ORTHO05D004626 5.2e-15 85.5 135 36.3
A04p23940 Brassica napus HOM05D003989 ORTHO05D004626 2.6e-14 83.2 98 45.9
BraA04t17918Z Brassica rapa HOM05D003989 ORTHO05D004626 2.6e-14 83.2 98 45.9
Medtr1g069860 Medicago truncatula HOM05D003989 ORTHO05D004626 9.8e-14 81.3 62 59.7
BcaB06g28507 Brassica carinata HOM05D003989 ORTHO05D004626 1.1e-12 77.8 91 44.0
A10p04820 Brassica napus HOM05D005109 ORTHO05D006084 1.2e-11 74.3 132 32.6
C04p60570 Brassica napus HOM05D003989 ORTHO05D004626 1.0e-10 71.2 76 47.4
BcaC02g11217 Brassica carinata HOM05D003989 ORTHO05D004626 2.1e-08 63.5 46 52.2
BcaC02g11218 Brassica carinata HOM05D003989 ORTHO05D004626 2.1e-08 63.5 46 52.2
BolC4t23443H Brassica oleracea HOM05D003989 ORTHO05D004626 2.1e-08 63.5 46 52.2
AUR62015564 Chenopodium quinoa HOM05D003989 ORTHO05D004626 2.8e-08 63.2 169 27.8
C04p19080 Brassica napus HOM05D003989 ORTHO05D004626 3.6e-08 62.8 46 52.2
Peaxi162Scf00016g00150 Petunia axillaris HOM05D001774 ORTHO05D001663 2.6e-06 56.6 107 31.8


User provided reference genes

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