Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5431 Utricularia gibba HOM05D007109 ORTHO05D008813 2.1e-139 499.2 284 100.0
MSTRG.20556 Avicennia marina HOM05D007109 ORTHO05D008813 5.0e-32 142.5 287 35.5
Migut.B01258 Erythranthe guttata HOM05D007109 ORTHO05D008813 4.2e-31 139.4 309 33.3
Migut.B01259 Erythranthe guttata HOM05D007109 ORTHO05D008813 5.1e-29 132.5 297 34.7
SGA_v2.0_scaffold4G02475 Striga asiatica HOM05D007109 ORTHO05D008813 9.7e-28 128.3 285 31.2
MSTRG.17005 Avicennia marina HOM05D007109 ORTHO05D008813 1.8e-26 124.0 237 35.4
MSTRG.5044 Avicennia marina HOM05D007109 ORTHO05D008813 2.2e-24 117.1 313 31.3
Cfa010821 Carpinus fangiana HOM05D007109 ORTHO05D008813 7.2e-23 112.1 278 30.6
Dinv07428 Davidia involucrata HOM05D007109 ORTHO05D008813 1.2e-22 111.3 276 31.2
Oeu014598.1 Olea europaea HOM05D007109 ORTHO05D008813 1.4e-21 107.8 287 30.7
THA.LOC104827430 Tarenaya hassleriana HOM05D007109 ORTHO05D008813 2.0e-20 104.0 250 34.8
Nitab4.5_0001244g0020 Nicotiana tabacum HOM05D007109 ORTHO05D008813 2.6e-20 103.6 238 31.5
PGSC0003DMG400041994 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.3e-20 103.2 194 35.1
PGSC0003DMG402006771 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.3e-20 103.2 194 35.1
Nitab4.5_0004222g0010 Nicotiana tabacum HOM05D007109 ORTHO05D008813 5.7e-20 102.4 190 36.3
Sopen01g034880 Solanum pennellii HOM05D007109 ORTHO05D008813 5.7e-20 102.4 193 34.7
TWI09G0588 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 7.4e-20 102.1 231 31.6
SalBow5G4816 Salvia bowleyana HOM05D007109 ORTHO05D008813 3.7e-19 99.8 235 31.1
CAN.G909.14 Capsicum annuum HOM05D007109 ORTHO05D008813 4.8e-19 99.4 192 32.8
Solyc01g087980.4 Solanum lycopersicum HOM05D007109 ORTHO05D008813 1.1e-18 98.2 194 33.5
Potri.009G055800 Populus trichocarpa HOM05D007109 ORTHO05D008813 1.4e-18 97.8 285 30.2
SalBow5G4465 Salvia bowleyana HOM05D007109 ORTHO05D008813 1.4e-18 97.8 228 31.1
Actinidia19426 Actinidia chinensis HOM05D007109 ORTHO05D008813 1.8e-18 97.4 282 30.1
QL04p010443 Quercus lobata HOM05D007109 ORTHO05D008813 2.4e-18 97.1 293 30.4
TWI73G0029 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 2.4e-18 97.1 234 31.2
Prupe.2G023200 Prunus persica HOM05D007109 ORTHO05D008813 6.9e-18 95.5 233 33.5
Rhsim01G0124900 Rhododendron simsii HOM05D007109 ORTHO05D008813 6.9e-18 95.5 278 29.5
Duzib138G1369 Durio zibethinus HOM05D007109 ORTHO05D008813 9.1e-18 95.1 192 33.9
Peaxi162Scf01108g00310 Petunia axillaris HOM05D007109 ORTHO05D008813 9.1e-18 95.1 184 33.7
AUR62009423 Chenopodium quinoa HOM05D007109 ORTHO05D008813 2.0e-17 94.0 239 30.1
Duzib268G1698 Durio zibethinus HOM05D007109 ORTHO05D008813 3.4e-17 93.2 194 32.5
RcHm_v2.0_Chr1g0318291 Rosa chinensis HOM05D007109 ORTHO05D008813 3.4e-17 93.2 195 31.8
Cc02_g28960 Coffea canephora HOM05D007109 ORTHO05D008813 5.9e-17 92.4 280 26.1
ClCG10G012150 Citrullus lanatus HOM05D007109 ORTHO05D008813 7.7e-17 92.0 249 33.7
Eucgr.G03285 Eucalyptus grandis HOM05D007109 ORTHO05D008813 7.7e-17 92.0 283 31.1
Atru.chr11.2527 Acer truncatum HOM05D007109 ORTHO05D008813 1.3e-16 91.3 203 28.1
COL.COLO4_12331 Corchorus olitorius HOM05D007109 ORTHO05D008813 1.3e-16 91.3 194 33.0
Thecc.01G404600 Theobroma cacao HOM05D007109 ORTHO05D008813 2.2e-16 90.5 192 32.3
FAN10G2826 Fragaria x ananassa HOM05D007109 ORTHO05D008813 2.9e-16 90.1 219 29.2
Psat7g150920 Pisum sativum HOM05D007109 ORTHO05D008813 2.9e-16 90.1 228 31.1
MD07G1022700 Malus domestica HOM05D007109 ORTHO05D008813 6.5e-16 89.0 194 30.9
vmacro13699 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 6.5e-16 89.0 292 27.7
arahy.Tifrunner.gnm1.ann1.K9M8RY Arachis hypogaea HOM05D007109 ORTHO05D008813 8.5e-16 88.6 236 32.2
Sabra09G0040900 Salix brachista HOM05D007109 ORTHO05D008813 8.5e-16 88.6 309 28.8
AUR62023101 Chenopodium quinoa HOM05D007109 ORTHO05D008813 1.1e-15 88.2 239 29.3
FvH4_7g01730 Fragaria vesca HOM05D007109 ORTHO05D008813 1.1e-15 88.2 195 29.7
FAN06G2427 Fragaria x ananassa HOM05D007109 ORTHO05D008813 1.1e-15 88.2 195 29.7
Manes.10G135500 Manihot esculenta HOM05D007109 ORTHO05D008813 1.1e-15 88.2 160 32.5
vmacro13701 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 1.9e-15 87.4 148 35.1
FAN03G1693 Fragaria x ananassa HOM05D007109 ORTHO05D008813 2.5e-15 87.0 195 30.3
MELO3C024000.2 Cucumis melo HOM05D007109 ORTHO05D008813 3.2e-15 86.7 251 33.5
Gorai.004G169100 Gossypium raimondii HOM05D007109 ORTHO05D008813 4.2e-15 86.3 244 28.3
Gohir.D08G162700 Gossypium hirsutum HOM05D007109 ORTHO05D008813 5.5e-15 85.9 241 28.2
Lj3g0020735 Lotus japonicus HOM05D007109 ORTHO05D008813 5.5e-15 85.9 278 28.4
Ah.10g038560 Amaranthus hybridus HOM05D007109 ORTHO05D008813 1.6e-14 84.3 241 30.7
Duzib133G0385 Durio zibethinus HOM05D007109 ORTHO05D008813 1.6e-14 84.3 257 28.4
MD07G1022600 Malus domestica HOM05D007109 ORTHO05D008813 1.6e-14 84.3 194 31.4
TPR.G14571 Trifolium pratense HOM05D007109 ORTHO05D008813 1.6e-14 84.3 211 30.3
Glyma.11G159021 Glycine max HOM05D007109 ORTHO05D008813 2.1e-14 84.0 261 29.5
Lsat_1_v5_gn_1_104740 Lactuca sativa HOM05D007109 ORTHO05D008813 2.1e-14 84.0 302 28.5
Glyma.04G142400 Glycine max HOM05D007109 ORTHO05D008813 2.7e-14 83.6 192 33.9
CiPaw.13G008200 Carya illinoinensis HOM05D007109 ORTHO05D008813 3.6e-14 83.2 281 27.8
Lj3g0012595 Lotus japonicus HOM05D007109 ORTHO05D008813 4.7e-14 82.8 259 29.0
MD02G1301300 Malus domestica HOM05D007109 ORTHO05D008813 4.7e-14 82.8 194 30.9
Medtr3g028060 Medicago truncatula HOM05D007109 ORTHO05D008813 6.1e-14 82.4 225 28.9
Hma1.2p1_0269F.1_g107760 Hydrangea macrophylla HOM05D007109 ORTHO05D008813 7.9e-14 82.0 283 28.6
Rhsim07G0059100 Rhododendron simsii HOM05D007109 ORTHO05D008813 7.9e-14 82.0 244 27.5
TPR.G8349 Trifolium pratense HOM05D007109 ORTHO05D008813 1.0e-13 81.6 222 30.2
Ciclev10032181m.g Citrus clementina HOM05D007109 ORTHO05D008813 1.8e-13 80.9 248 27.0
HanXRQChr01g0007891 Helianthus annuus HOM05D007109 ORTHO05D008813 1.8e-13 80.9 192 28.6
CANSAT80G2748 Cannabis sativa HOM05D007109 ORTHO05D008813 2.3e-13 80.5 183 33.3
Ca_26440_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 2.3e-13 80.5 223 30.0
Actinidia23253 Actinidia chinensis HOM05D007109 ORTHO05D008813 3.0e-13 80.1 261 30.3
Medtr0003s0580 Medicago truncatula HOM05D007109 ORTHO05D008813 3.0e-13 80.1 200 28.0
Nn7g36341 Nelumbo nucifera HOM05D007109 ORTHO05D008813 3.0e-13 80.1 281 26.7
CiPaw.15G135600 Carya illinoinensis HOM05D007109 ORTHO05D008813 3.9e-13 79.7 244 27.9
Cpa.g.sc125.54 Carica papaya HOM05D007109 ORTHO05D008813 6.7e-13 79.0 196 31.6
Gohir.A08G141600 Gossypium hirsutum HOM05D007109 ORTHO05D008813 6.7e-13 79.0 229 27.9
Lsat_1_v5_gn_1_104720 Lactuca sativa HOM05D007109 ORTHO05D008813 8.8e-13 78.6 282 27.0
ECA248G3518 Erigeron canadensis HOM05D007109 ORTHO05D008813 1.5e-12 77.8 196 29.1
Phvul.005G036000 Phaseolus vulgaris HOM05D007109 ORTHO05D008813 1.5e-12 77.8 248 28.6
Manes.07G011500 Manihot esculenta HOM05D007109 ORTHO05D008813 2.0e-12 77.4 199 29.1
Lalb_Chr25g0282601 Lupinus albus HOM05D007109 ORTHO05D008813 4.4e-12 76.3 230 27.4
Sed0007712 Sechium edule HOM05D007109 ORTHO05D008813 4.4e-12 76.3 241 33.2
CiPaw.14G003600 Carya illinoinensis HOM05D007109 ORTHO05D008813 5.7e-12 75.9 245 28.6
Cpa.g.c33908 Carica papaya HOM05D007109 ORTHO05D008813 7.4e-12 75.5 200 31.0
Lalb_Chr01g0000491 Lupinus albus HOM05D007109 ORTHO05D008813 1.7e-11 74.3 197 31.5
Medtr3g034370 Medicago truncatula HOM05D007109 ORTHO05D008813 2.2e-11 73.9 215 29.8
Oeu049473.1 Olea europaea HOM05D007109 ORTHO05D008813 2.2e-11 73.9 269 26.8
Ca_27474_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 3.7e-11 73.2 173 31.2
ClCG09G004450 Citrullus lanatus HOM05D007109 ORTHO05D008813 3.7e-11 73.2 238 28.6
Sc14g0004980 Simmondsia chinensis HOM05D007109 ORTHO05D008813 4.8e-11 72.8 89 40.4
CsaV3_7G030690 Cucumis sativus L. HOM05D007109 ORTHO05D008813 1.1e-10 71.6 232 26.7
TAR633G0887 Trochodendron aralioides HOM05D007109 ORTHO05D008813 3.1e-10 70.1 101 36.6
MELO3C023587.2 Cucumis melo HOM05D007109 ORTHO05D008813 4.1e-10 69.7 185 33.5
VMungo1080G0219 Vigna mungo HOM05D007109 ORTHO05D008813 7.0e-10 68.9 173 31.8
Sed0006814 Sechium edule HOM05D007109 ORTHO05D008813 9.1e-10 68.6 193 28.5
Solyc04g050200.1 Solanum lycopersicum HOM05D007109 ORTHO05D008813 2.6e-09 67.0 70 41.4
Actinidia08354 Actinidia chinensis HOM05D007109 ORTHO05D008813 7.7e-09 65.5 116 31.9
Actinidia25349 Actinidia chinensis HOM05D007109 ORTHO05D008813 7.7e-09 65.5 116 31.9
TPR.G40170 Trifolium pratense HOM05D007109 ORTHO05D008813 3.2e-07 60.1 68 39.7
Sed0019738 Sechium edule HOM05D007109 ORTHO05D008813 9.4e-07 58.5 173 24.3
SalBow1G2857 Salvia bowleyana HOM05D007109 ORTHO05D008813 8.0e-06 55.5 69 37.7


User provided reference genes

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