Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5282 Utricularia gibba HOM05D003099 ORTHO05D003604 3.4e-46 188.0 95 100.0
unitig_8.g3732 Utricularia gibba HOM05D003099 ORTHO05D003604 4.5e-14 81.3 42 92.9
Glyma.03G159100 Glycine max HOM05D003099 ORTHO05D003604 3.4e-09 65.1 39 84.6
Sc24g0004320 Simmondsia chinensis HOM05D003099 ORTHO05D003604 3.4e-09 65.1 34 85.3
Nn1g02577 Nelumbo nucifera HOM05D003099 ORTHO05D003604 9.8e-09 63.5 40 80.0
Sabra02G0035600 Salix brachista HOM05D003099 ORTHO05D003604 9.8e-09 63.5 39 82.1
CSS0002873 Camellia sinensis var. sinensis HOM05D003099 ORTHO05D003604 1.7e-08 62.8 41 78.0
COL.COLO4_05100 Corchorus olitorius HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
HanXRQChr01g0006831 Helianthus annuus HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Lsat_1_v5_gn_5_186721 Lactuca sativa HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Nitab4.5_0001044g0040 Nicotiana tabacum HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Nitab4.5_0004899g0020 Nicotiana tabacum HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Peaxi162Scf01311g00015 Petunia axillaris HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Peaxi162Scf01311g00019 Petunia axillaris HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Peaxi162Scf01311g00120 Petunia axillaris HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Peaxi162Scf01311g00122 Petunia axillaris HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
Peaxi162Scf15014g00002 Petunia axillaris HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 79.5
unitig_699.g19314 Utricularia gibba HOM05D003099 ORTHO05D003604 1.7e-08 62.8 39 84.6
ECA248G3440 Erigeron canadensis HOM05D003099 ORTHO05D003604 2.2e-08 62.4 39 79.5
HanXRQChr01g0006821 Helianthus annuus HOM05D003099 ORTHO05D003604 2.2e-08 62.4 39 79.5
FvH4_2g22470 Fragaria vesca HOM05D003099 ORTHO05D003604 2.8e-08 62.0 39 79.5
FAN15G0314 Fragaria x ananassa HOM05D003099 ORTHO05D003604 2.8e-08 62.0 39 79.5
FAN20G0198 Fragaria x ananassa HOM05D003099 ORTHO05D003604 2.8e-08 62.0 39 79.5
FAN24G2455 Fragaria x ananassa HOM05D003099 ORTHO05D003604 2.8e-08 62.0 39 79.5
Hma1.2p1_0172F.1_g076240 Hydrangea macrophylla HOM05D003099 ORTHO05D003604 2.8e-08 62.0 43 79.1
Lj5g0001887 Lotus japonicus HOM05D003099 ORTHO05D003604 2.8e-08 62.0 39 79.5
RcHm_v2.0_Chr6g0289411 Rosa chinensis HOM05D003099 ORTHO05D003604 2.8e-08 62.0 39 79.5
TPR.G5768 Trifolium pratense HOM05D003099 ORTHO05D003604 2.8e-08 62.0 38 81.6
Atru.chr5.1586 Acer truncatum HOM05D003099 ORTHO05D003604 3.7e-08 61.6 39 76.9
Actinidia24941 Actinidia chinensis HOM05D003099 ORTHO05D003604 3.7e-08 61.6 41 75.6
DCAR_018450 Daucus carota HOM05D003099 ORTHO05D003604 3.7e-08 61.6 39 79.5
DCAR_018451 Daucus carota HOM05D003099 ORTHO05D003604 3.7e-08 61.6 39 79.5
Migut.D00378 Erythranthe guttata HOM05D003099 ORTHO05D003604 3.7e-08 61.6 39 79.5
AUR62032252 Chenopodium quinoa HOM05D003099 ORTHO05D003604 4.9e-08 61.2 41 75.6
Nitab4.5_0000187g0260 Nicotiana tabacum HOM05D003099 ORTHO05D003604 4.9e-08 61.2 41 75.6
Nitab4.5_0002680g0040 Nicotiana tabacum HOM05D003099 ORTHO05D003604 4.9e-08 61.2 39 76.9
Peaxi162Scf01099g00035 Petunia axillaris HOM05D003099 ORTHO05D003604 4.9e-08 61.2 39 76.9
Psat3g060160 Pisum sativum HOM05D003099 ORTHO05D003604 4.9e-08 61.2 38 78.9
Solyc06g084050.4 Solanum lycopersicum HOM05D003099 ORTHO05D003604 4.9e-08 61.2 41 73.2
Sopen06g035440 Solanum pennellii HOM05D003099 ORTHO05D003604 4.9e-08 61.2 41 73.2
Thecc.05G281400 Theobroma cacao HOM05D003099 ORTHO05D003604 4.9e-08 61.2 43 79.1
Aqoxy5G00342 Aquilegia oxysepala HOM05D003099 ORTHO05D003604 6.3e-08 60.8 41 78.0
arahy.Tifrunner.gnm1.ann1.RVN5Z1 Arachis hypogaea HOM05D003099 ORTHO05D003604 6.3e-08 60.8 40 72.5
CiPaw.04G182400 Carya illinoinensis HOM05D003099 ORTHO05D003604 6.3e-08 60.8 39 76.9
Potri.002G044300 Populus trichocarpa HOM05D003099 ORTHO05D003604 6.3e-08 60.8 41 75.6
Potri.005G218800 Populus trichocarpa HOM05D003099 ORTHO05D003604 6.3e-08 60.8 41 75.6
TPR.G35733 Trifolium pratense HOM05D003099 ORTHO05D003604 6.3e-08 60.8 39 76.9
TAR633G0978 Trochodendron aralioides HOM05D003099 ORTHO05D003604 6.3e-08 60.8 41 78.0
ECA247G0513 Erigeron canadensis HOM05D003099 ORTHO05D003604 8.3e-08 60.5 37 81.1
Lalb_Chr01g0019881 Lupinus albus HOM05D003099 ORTHO05D003604 8.3e-08 60.5 40 75.0
Medtr7g096150 Medicago truncatula HOM05D003099 ORTHO05D003604 8.3e-08 60.5 38 76.3
Nn3g19519 Nelumbo nucifera HOM05D003099 ORTHO05D003604 8.3e-08 60.5 41 78.0
CAN.G824.14 Capsicum annuum HOM05D003099 ORTHO05D003604 1.1e-07 60.1 38 81.6
Medtr1g070495 Medicago truncatula HOM05D003099 ORTHO05D003604 1.1e-07 60.1 39 74.4
Psat3g060600 Pisum sativum HOM05D003099 ORTHO05D003604 1.1e-07 60.1 43 76.7
Actinidia24954 Actinidia chinensis HOM05D001376 ORTHO05D019477 1.4e-07 59.7 53 64.2
Ah.02g111450 Amaranthus hybridus HOM05D003099 ORTHO05D003604 1.4e-07 59.7 39 76.9
Ah.11g049930 Amaranthus hybridus HOM05D003099 ORTHO05D003604 1.4e-07 59.7 41 73.2
AUR62011936 Chenopodium quinoa HOM05D003099 ORTHO05D003604 1.4e-07 59.7 41 73.2
Psat6g057600 Pisum sativum HOM05D003099 ORTHO05D003604 1.4e-07 59.7 39 74.4
Solyc09g065910.3 Solanum lycopersicum HOM05D003099 ORTHO05D003604 1.4e-07 59.7 39 74.4
CANSAT35G0793 Cannabis sativa HOM05D003099 ORTHO05D003604 1.8e-07 59.3 41 75.6
Ca_08647_v3 Cicer arietinum L. HOM05D003099 ORTHO05D003604 1.8e-07 59.3 43 74.4
Ca_09712_v3 Cicer arietinum L. HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 74.4
Ca_09713_v3 Cicer arietinum L. HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 74.4
DCAR_005874 Daucus carota HOM05D003099 ORTHO05D003604 1.8e-07 59.3 41 70.7
Gohir.A11G127700 Gossypium hirsutum HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 74.4
Gohir.D11G133100 Gossypium hirsutum HOM05D003099 ORTHO05D003604 1.8e-07 59.3 60 56.7
Gorai.007G142300 Gossypium raimondii HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 74.4
Lsat_1_v5_gn_9_9761 Lactuca sativa HOM05D003099 ORTHO05D003604 1.8e-07 59.3 37 78.4
Lalb_Chr20g0107821 Lupinus albus HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 76.9
Sopen09g027700 Solanum pennellii HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 74.4
PGSC0003DMG400007536 Solanum tuberosum HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 74.4
PGSC0003DMG400020141 Solanum tuberosum HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 79.5
SGA_v2.0_scaffold138G35271 Striga asiatica HOM05D003099 ORTHO05D003604 1.8e-07 59.3 39 74.4
Actinidia21159 Actinidia chinensis HOM05D003099 ORTHO05D003604 2.4e-07 58.9 41 73.2
ClCG09G007590 Citrullus lanatus HOM05D003099 ORTHO05D003604 2.4e-07 58.9 39 76.9
MELO3C015772.2 Cucumis melo HOM05D003099 ORTHO05D003604 2.4e-07 58.9 39 76.9
CsaV3_7G027520 Cucumis sativus L. HOM05D003099 ORTHO05D003604 2.4e-07 58.9 39 76.9
Glyma.02G141700 Glycine max HOM05D003099 ORTHO05D003604 2.4e-07 58.9 41 75.6
Glyma.10G032200 Glycine max HOM05D003099 ORTHO05D003604 2.4e-07 58.9 41 75.6
Glyma.19G161400 Glycine max HOM05D003099 ORTHO05D003604 2.4e-07 58.9 41 73.2
Manes.08G135500 Manihot esculenta HOM05D003099 ORTHO05D003604 2.4e-07 58.9 41 75.6
Phvul.001G157100 Phaseolus vulgaris HOM05D003099 ORTHO05D003604 2.4e-07 58.9 41 73.2
Sed0028129 Sechium edule HOM05D003099 ORTHO05D003604 2.4e-07 58.9 39 76.9
THA.LOC104826257 Tarenaya hassleriana HOM05D003099 ORTHO05D003604 2.4e-07 58.9 39 76.9
VMungo1383G1041 Vigna mungo HOM05D003099 ORTHO05D003604 2.4e-07 58.9 41 73.2
TAR365G0594 Trochodendron aralioides HOM05D003099 ORTHO05D003604 3.1e-07 58.5 41 73.2
CiPaw.03G258100 Carya illinoinensis HOM05D003099 ORTHO05D003604 4.1e-07 58.2 39 74.4
Ciclev10024455m.g Citrus clementina HOM05D003099 ORTHO05D003604 4.1e-07 58.2 41 70.7
Gohir.A07G209400 Gossypium hirsutum HOM05D003099 ORTHO05D003604 4.1e-07 58.2 41 70.7
Gohir.D07G215500 Gossypium hirsutum HOM05D003099 ORTHO05D003604 4.1e-07 58.2 41 70.7
Gorai.001G243300 Gossypium raimondii HOM05D003099 ORTHO05D003604 4.1e-07 58.2 41 70.7
HanXRQChr10g0281431 Helianthus annuus HOM05D003099 ORTHO05D003604 4.1e-07 58.2 36 77.8
Phvul.007G177300 Phaseolus vulgaris HOM05D003099 ORTHO05D003604 4.1e-07 58.2 41 73.2
Sabra05G0167800 Salix brachista HOM05D003099 ORTHO05D003604 4.1e-07 58.2 41 73.2
TWI18G0559 Tripterygium wilfordii HOM05D003099 ORTHO05D003604 4.1e-07 58.2 39 76.9
Aa31LG5G6200 Aethionema arabicum HOM05D003099 ORTHO05D003604 5.4e-07 57.8 37 81.1
MSTRG.18291 Avicennia marina HOM05D003099 ORTHO05D003604 5.4e-07 57.8 30 90.0
BcaC05g24651 Brassica carinata HOM05D003099 ORTHO05D003604 5.4e-07 57.8 40 67.5
C05p04960 Brassica napus HOM05D003099 ORTHO05D003604 5.4e-07 57.8 40 67.5
Cfa006410 Carpinus fangiana HOM05D003099 ORTHO05D003604 5.4e-07 57.8 44 70.5
QL03p027212 Quercus lobata HOM05D003099 ORTHO05D003604 5.4e-07 57.8 43 72.1
Sp1g05520 Schrenkiella parvula HOM05D003099 ORTHO05D003604 5.4e-07 57.8 31 87.1
AL4G25450 Arabidopsis lyrata HOM05D003099 ORTHO05D003604 7.0e-07 57.4 45 71.1
AT2G30570 Arabidopsis thaliana HOM05D003099 ORTHO05D003604 7.0e-07 57.4 45 71.1
arahy.Tifrunner.gnm1.ann1.RCVM4C Arachis hypogaea HOM05D003099 ORTHO05D003604 7.0e-07 57.4 41 73.2
Cfa002335 Carpinus fangiana HOM05D000186 ORTHO05D005094 7.0e-07 57.4 39 74.4
ClCG02G016710 Citrullus lanatus HOM05D003099 ORTHO05D003604 7.0e-07 57.4 41 75.6
Haze_24538 Corylus avellana HOM05D003099 ORTHO05D003604 7.0e-07 57.4 39 74.4
Dinv22474 Davidia involucrata HOM05D003099 ORTHO05D003604 7.0e-07 57.4 39 74.4
Thhalv10009104m.g Eutrema salsugineum HOM05D003099 ORTHO05D003604 7.0e-07 57.4 36 75.0
MD05G1205000 Malus domestica HOM05D003099 ORTHO05D003604 7.0e-07 57.4 39 74.4
MD10G1192100 Malus domestica HOM05D003099 ORTHO05D003604 7.0e-07 57.4 39 74.4
Manes.09G152100 Manihot esculenta HOM05D003099 ORTHO05D003604 7.0e-07 57.4 41 75.6
PGR119G2190 Punica granatum HOM05D003099 ORTHO05D003604 7.0e-07 57.4 40 72.5
TAR362G0504 Trochodendron aralioides HOM05D003099 ORTHO05D003604 7.0e-07 57.4 41 73.2
GSVIVG01000743001 Vitis vinifera HOM05D003099 ORTHO05D003604 7.0e-07 57.4 41 70.7
CAN.G771.15 Capsicum annuum HOM05D003099 ORTHO05D003604 9.2e-07 57.0 40 75.0
Cpa.g.sc52.136 Carica papaya HOM05D003099 ORTHO05D003604 9.2e-07 57.0 42 71.4
Cc01_g18800 Coffea canephora HOM05D003099 ORTHO05D003604 9.2e-07 57.0 39 71.8
CsaV3_2G004030 Cucumis sativus L. HOM05D003099 ORTHO05D003604 9.2e-07 57.0 40 75.0
Lj1g0021907 Lotus japonicus HOM05D003099 ORTHO05D003604 9.2e-07 57.0 39 74.4
Lalb_Chr06g0162641 Lupinus albus HOM05D003099 ORTHO05D003604 9.2e-07 57.0 39 74.4
Oeu058804.1 Olea europaea HOM05D003099 ORTHO05D003604 9.2e-07 57.0 38 78.9
Sed0003828 Sechium edule HOM05D003099 ORTHO05D003604 9.2e-07 57.0 39 79.5
SGA_v2.0_scaffold1G00561 Striga asiatica HOM05D003099 ORTHO05D003604 9.2e-07 57.0 30 86.7
VMungo0720G0343 Vigna mungo HOM05D003099 ORTHO05D003604 9.2e-07 57.0 41 73.2
GSVIVG01036277001 Vitis vinifera HOM05D003099 ORTHO05D003604 9.2e-07 57.0 29 93.1
MSTRG.17474 Avicennia marina HOM05D003099 ORTHO05D003604 1.2e-06 56.6 39 74.4
BcaB02g06758 Brassica carinata HOM05D003099 ORTHO05D003604 1.2e-06 56.6 40 67.5
A10p05380 Brassica napus HOM05D003099 ORTHO05D003604 1.2e-06 56.6 40 67.5
BolC5t29268H Brassica oleracea HOM05D003099 ORTHO05D003604 1.2e-06 56.6 40 67.5
BraA10t42802Z Brassica rapa HOM05D003099 ORTHO05D003604 1.2e-06 56.6 40 67.5
Haze_04368 Corylus avellana HOM05D003099 ORTHO05D003604 1.2e-06 56.6 43 69.8
PSO210G4858 Papaver somniferum HOM05D003099 ORTHO05D003604 1.2e-06 56.6 41 73.2
Prupe.8G231600 Prunus persica HOM05D003099 ORTHO05D003604 1.2e-06 56.6 39 71.8
QL12p042781 Quercus lobata HOM05D003099 ORTHO05D003604 1.2e-06 56.6 40 75.0
Sed0006021 Sechium edule HOM05D003099 ORTHO05D003604 1.2e-06 56.6 29 93.1
Hund02884 Selenicereus undatus HOM05D003099 ORTHO05D003604 1.2e-06 56.6 41 68.3
Thecc.01G266800 Theobroma cacao HOM05D003099 ORTHO05D003604 1.2e-06 56.6 43 65.1
TWI75G1330 Tripterygium wilfordii HOM05D003099 ORTHO05D003604 1.2e-06 56.6 45 73.3
BcaB02g10333 Brassica carinata HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
BcaC02g11153 Brassica carinata HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
A04p23310 Brassica napus HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
A05p14910 Brassica napus HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
C04p19910 Brassica napus HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
C04p19940 Brassica napus HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
C04p59610 Brassica napus HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
BolC4t23533H Brassica oleracea HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
BolC4t27469H Brassica oleracea HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
BraA04t17859Z Brassica rapa HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
BraA05t20417Z Brassica rapa HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
CARHR124030 Cardamine hirsuta HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
COL.COLO4_15367 Corchorus olitorius HOM05D003099 ORTHO05D003604 1.6e-06 56.2 29 89.7
MELO3C004388.2 Cucumis melo HOM05D003099 ORTHO05D003604 1.6e-06 56.2 40 72.5
Eucgr.B01493 Eucalyptus grandis HOM05D003099 ORTHO05D003604 1.6e-06 56.2 39 71.8
Thhalv10017409m.g Eutrema salsugineum HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
Gohir.A08G188400 Gossypium hirsutum HOM05D003099 ORTHO05D003604 1.6e-06 56.2 29 89.7
Gohir.D08G206800 Gossypium hirsutum HOM05D003099 ORTHO05D003604 1.6e-06 56.2 29 89.7
Gorai.004G219000 Gossypium raimondii HOM05D003099 ORTHO05D003604 1.6e-06 56.2 29 89.7
Manes.05G084800 Manihot esculenta HOM05D003099 ORTHO05D003604 1.6e-06 56.2 39 71.8
Sp4g13110 Schrenkiella parvula HOM05D003099 ORTHO05D003604 1.6e-06 56.2 45 68.9
THA.LOC104800799 Tarenaya hassleriana HOM05D003099 ORTHO05D003604 1.6e-06 56.2 29 89.7
Carub.0004s1172 Capsella rubella HOM05D003099 ORTHO05D003604 2.0e-06 55.8 45 68.9
Hma1.2p1_1029F.1_g249630 Hydrangea macrophylla HOM05D003099 ORTHO05D003604 2.0e-06 55.8 39 69.2
Hma1.2p1_1029F.1_g249643 Hydrangea macrophylla HOM05D003099 ORTHO05D003604 2.0e-06 55.8 39 69.2
PSO210G4758 Papaver somniferum HOM05D003099 ORTHO05D003604 2.0e-06 55.8 39 74.4
TWI12G1033 Tripterygium wilfordii HOM05D003099 ORTHO05D003604 2.0e-06 55.8 41 68.3
CDE10G0122 Ceratophyllum demersum HOM05D003099 ORTHO05D003604 2.7e-06 55.5 39 79.5
CDE10G0819 Ceratophyllum demersum HOM05D003099 ORTHO05D003604 2.7e-06 55.5 39 79.5
PSO238G0010 Papaver somniferum HOM05D003099 ORTHO05D003604 3.5e-06 55.1 29 93.1
PGR044G2666 Punica granatum HOM05D003099 ORTHO05D003604 3.5e-06 55.1 40 72.5
Thecc.05G281600 Theobroma cacao HOM05D003099 ORTHO05D003604 3.5e-06 55.1 39 79.5
BcaC02g11149 Brassica carinata HOM05D003099 ORTHO05D003604 4.5e-06 54.7 39 69.2
Atru.chr2.833 Acer truncatum HOM05D003099 ORTHO05D003604 5.9e-06 54.3 29 89.7
EL10Ac5g10460 Beta vulgaris HOM05D003099 ORTHO05D003604 5.9e-06 54.3 29 82.8
Actinidia09089 Actinidia chinensis HOM05D003099 ORTHO05D003604 7.8e-06 53.9 39 69.2
Oeu010131.1 Olea europaea HOM05D000186 ORTHO05D003604 7.8e-06 53.9 43 69.8


User provided reference genes

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