Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 1.9e-145 519.2 283 100.0
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 6.5e-101 371.3 305 73.4
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 2.1e-83 313.2 289 64.4
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 9.8e-81 304.3 289 62.6
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 1.3e-80 303.9 293 61.1
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 6.4e-80 301.6 291 61.9
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 3.5e-78 295.8 286 61.5
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 3.0e-77 292.7 299 59.5
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 3.9e-77 292.4 290 59.3
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 5.0e-77 292.0 293 58.7
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 1.1e-76 290.8 289 60.9
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 4.3e-76 288.9 290 58.6
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.6e-75 287.0 296 57.8
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 2.1e-75 286.6 293 58.4
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 3.6e-75 285.8 295 57.3
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 5.2e-74 282.0 308 57.5
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 1.5e-73 280.4 245 64.5
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 2.0e-73 280.0 293 57.0
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 3.4e-73 279.3 298 57.7
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 7.5e-73 278.1 296 57.8
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 1.7e-72 276.9 284 58.8
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 2.9e-72 276.2 280 57.5
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 2.9e-72 276.2 303 56.8
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 3.7e-72 275.8 295 55.3
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 4.9e-72 275.4 286 60.1
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 6.4e-72 275.0 297 56.2
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 6.4e-72 275.0 293 56.3
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 6.4e-72 275.0 284 57.4
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 6.4e-72 275.0 296 55.7
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 8.3e-72 274.6 297 56.2
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 8.3e-72 274.6 294 58.2
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.1e-71 274.2 288 56.2
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.1e-71 274.2 295 54.9
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 1.1e-71 274.2 281 58.0
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 1.4e-71 273.9 293 55.6
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 1.4e-71 273.9 287 57.1
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 1.4e-71 273.9 286 56.6
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 1.9e-71 273.5 213 70.0
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 1.9e-71 273.5 295 56.6
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 1.9e-71 273.5 291 56.0
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 3.2e-71 272.7 260 59.2
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 4.1e-71 272.3 268 57.5
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 4.1e-71 272.3 289 57.4
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 4.1e-71 272.3 289 56.7
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 5.4e-71 271.9 298 55.7
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 5.4e-71 271.9 198 71.7
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 5.4e-71 271.9 285 58.2
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 9.2e-71 271.2 220 67.3
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 9.2e-71 271.2 287 57.5
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 9.2e-71 271.2 210 70.0
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 9.2e-71 271.2 291 56.4
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 1.6e-70 270.4 216 66.7
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 1.6e-70 270.4 290 56.2
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 1.6e-70 270.4 273 57.5
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 1.6e-70 270.4 223 64.1
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 2.7e-70 269.6 306 54.6
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 2.7e-70 269.6 295 57.3
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 4.6e-70 268.9 285 57.2
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 4.6e-70 268.9 278 56.1
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 4.6e-70 268.9 284 54.2
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 4.6e-70 268.9 297 55.9
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 6.0e-70 268.5 287 56.1
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 7.8e-70 268.1 295 55.9
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 1.0e-69 267.7 297 55.2
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 1.3e-69 267.3 197 72.6
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 1.3e-69 267.3 291 56.0
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 1.3e-69 267.3 300 56.0
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.3e-69 267.3 298 54.4
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 1.3e-69 267.3 234 62.8
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 1.7e-69 266.9 298 55.0
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 2.3e-69 266.5 290 54.8
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 2.3e-69 266.5 215 67.0
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 3.0e-69 266.2 279 55.2
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 3.0e-69 266.2 278 56.5
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 3.9e-69 265.8 279 54.8
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 3.9e-69 265.8 302 55.6
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 5.0e-69 265.4 214 67.3
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 6.6e-69 265.0 292 56.5
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 1.1e-68 264.2 199 69.3
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 1.1e-68 264.2 282 57.1
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 1.9e-68 263.5 205 69.3
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 1.9e-68 263.5 205 69.3
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 2.5e-68 263.1 201 70.6
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 2.5e-68 263.1 195 71.3
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 2.5e-68 263.1 275 57.5
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 4.3e-68 262.3 298 54.7
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 4.3e-68 262.3 297 53.9
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 5.6e-68 261.9 287 55.1
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 7.3e-68 261.5 284 56.7
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 7.3e-68 261.5 244 60.7
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 7.3e-68 261.5 244 60.7
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 7.3e-68 261.5 299 53.8
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 9.5e-68 261.2 294 56.1
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 9.5e-68 261.2 283 56.9
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 9.5e-68 261.2 295 55.6
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.2e-67 260.8 295 55.3
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 2.8e-67 259.6 211 66.8
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 3.6e-67 259.2 235 62.6
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 3.6e-67 259.2 293 54.3
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 3.6e-67 259.2 289 55.4
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 3.6e-67 259.2 283 56.2
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 6.2e-67 258.5 241 60.6
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 6.2e-67 258.5 287 55.1
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 8.1e-67 258.1 290 53.8
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 1.1e-66 257.7 287 55.1
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 1.1e-66 257.7 282 55.7
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 1.4e-66 257.3 293 54.6
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 1.8e-66 256.9 272 56.6
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 1.8e-66 256.9 283 56.2
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 1.8e-66 256.9 289 52.2
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 3.1e-66 256.1 294 56.1
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 4.0e-66 255.8 186 71.5
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 5.2e-66 255.4 275 56.4
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 1.2e-65 254.2 269 54.3
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.5e-65 253.8 292 54.5
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 2.0e-65 253.4 297 53.2
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 2.6e-65 253.1 275 55.3
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 3.4e-65 252.7 297 53.9
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 5.8e-65 251.9 272 55.1
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 5.8e-65 251.9 274 56.2
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 9.9e-65 251.1 275 55.6
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.3e-64 250.8 298 54.4
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 2.4e-63 246.5 215 61.9
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 1.2e-62 244.2 282 54.6
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 2.1e-62 243.4 193 67.9
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.0e-61 241.1 189 66.7
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 1.7e-61 240.4 351 46.7
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 3.3e-60 236.1 269 53.5
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 9.5e-60 234.6 178 68.5
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 9.5e-60 234.6 280 52.1
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 6.2e-59 231.9 225 56.4
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 8.1e-59 231.5 361 45.4
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 1.1e-58 231.1 271 55.4
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 1.2e-57 227.6 211 58.8
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 9.9e-57 224.6 275 49.5
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 1.3e-56 224.2 208 62.0
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 1.7e-56 223.8 278 52.2
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 1.7e-56 223.8 243 55.1
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 2.9e-56 223.0 234 54.7
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 1.4e-55 220.7 348 44.5
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 2.4e-55 219.9 305 46.9
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 9.2e-55 218.0 184 63.6
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 7.8e-54 214.9 290 44.8
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.1e-52 211.1 241 53.1
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 2.1e-51 206.8 181 62.4
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 9.9e-49 198.0 202 54.0
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 3.8e-40 169.5 195 50.3
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 1.1e-39 167.9 148 60.8
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 1.0e-37 161.4 191 51.3
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 7.9e-30 135.2 107 68.2
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 9.6e-28 128.3 271 36.5
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 2.8e-27 126.7 283 36.7
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 5.3e-26 122.5 115 55.7
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 7.6e-25 118.6 89 66.3
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 1.2e-22 111.3 209 36.8
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 2.5e-20 103.6 75 72.0
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 1.3e-19 101.3 206 37.4
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 3.7e-19 99.8 158 47.5
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 4.8e-19 99.4 91 58.2
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 2.5e-15 87.0 65 66.2
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 3.2e-15 86.7 65 66.2
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 1.1e-10 71.6 167 36.5
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 4.2e-07 59.7 42 66.7


User provided reference genes

Program Settings