Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5110 Utricularia gibba HOM05D003951 ORTHO05D020105 1.4e-201 706.1 357 100.0
MSTRG.19211 Avicennia marina HOM05D003951 ORTHO05D005378 1.6e-112 410.2 380 57.6
Migut.J00480 Erythranthe guttata HOM05D003951 ORTHO05D005378 3.1e-108 396.0 383 55.4
SalBow3G1921 Salvia bowleyana HOM05D003951 ORTHO05D005378 5.0e-106 388.7 381 54.6
Dinv30270 Davidia involucrata HOM05D003951 ORTHO05D005378 1.4e-100 370.5 380 52.1
SGA_v2.0_scaffold657G53382 Striga asiatica HOM05D003951 ORTHO05D005378 2.7e-99 366.3 383 51.4
Prupe.1G450600 Prunus persica HOM05D003951 ORTHO05D005378 1.3e-98 364.0 380 49.5
Glyma.06G083700 Glycine max HOM05D003951 ORTHO05D005378 1.7e-98 363.6 380 50.0
Lalb_Chr08g0243161 Lupinus albus HOM05D003951 ORTHO05D005378 1.7e-98 363.6 378 51.1
Glyma.04G082000 Glycine max HOM05D003951 ORTHO05D005378 2.2e-98 363.2 380 50.0
arahy.Tifrunner.gnm1.ann1.ZA6ZKK Arachis hypogaea HOM05D003951 ORTHO05D005378 3.8e-98 362.5 380 50.5
arahy.Tifrunner.gnm1.ann1.6KB6B4 Arachis hypogaea HOM05D003951 ORTHO05D005378 6.5e-98 361.7 380 49.7
Oeu038879.1 Olea europaea HOM05D003951 ORTHO05D005378 1.1e-97 360.9 380 51.3
Nitab4.5_0000132g0420 Nicotiana tabacum HOM05D003951 ORTHO05D005378 9.4e-97 357.8 380 48.7
Thecc.09G042400 Theobroma cacao HOM05D003951 ORTHO05D005378 2.7e-96 356.3 381 48.8
Duzib187G0774 Durio zibethinus HOM05D003951 ORTHO05D005378 4.7e-96 355.5 382 47.9
TAR383G0035 Trochodendron aralioides HOM05D003951 ORTHO05D005378 4.7e-96 355.5 380 48.2
Psat5g022720 Pisum sativum HOM05D003951 ORTHO05D005378 3.0e-95 352.8 378 47.6
VMungo1309G1090 Vigna mungo HOM05D003951 ORTHO05D005378 3.0e-95 352.8 381 49.1
Nitab4.5_0010350g0010 Nicotiana tabacum HOM05D003951 ORTHO05D005378 5.2e-95 352.1 380 48.4
Hma1.2p1_0590F.1_g185010 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 6.8e-95 351.7 380 50.0
CSS0015540 Camellia sinensis var. sinensis HOM05D003951 ORTHO05D005378 1.2e-94 350.9 381 49.3
GSVIVG01035648001 Vitis vinifera HOM05D003951 ORTHO05D005378 1.5e-94 350.5 382 48.4
RcHm_v2.0_Chr6g0305971 Rosa chinensis HOM05D003951 ORTHO05D005378 2.0e-94 350.1 381 48.6
Ca_15606_v3 Cicer arietinum L. HOM05D003951 ORTHO05D005378 2.6e-94 349.7 380 47.6
Actinidia14668 Actinidia chinensis HOM05D003951 ORTHO05D005378 3.4e-94 349.4 380 47.9
Cfa013355 Carpinus fangiana HOM05D003951 ORTHO05D005378 3.4e-94 349.4 376 47.9
Cpa.g.sc7.257 Carica papaya HOM05D003951 ORTHO05D005378 4.4e-94 349.0 379 48.3
Lalb_Chr23g0269551 Lupinus albus HOM05D003951 ORTHO05D005378 5.7e-94 348.6 379 48.0
Nn2g11661 Nelumbo nucifera HOM05D003951 ORTHO05D005378 5.7e-94 348.6 380 47.1
PSO210G0075 Papaver somniferum HOM05D003951 ORTHO05D005378 5.7e-94 348.6 380 48.9
TPR.G1335 Trifolium pratense HOM05D003951 ORTHO05D005378 5.7e-94 348.6 380 47.6
Oeu017004.2 Olea europaea HOM05D003951 ORTHO05D005378 7.5e-94 348.2 436 45.0
PSO210G7231 Papaver somniferum HOM05D003951 ORTHO05D005378 9.8e-94 347.8 380 48.7
Phvul.009G107800 Phaseolus vulgaris HOM05D003951 ORTHO05D005378 1.7e-93 347.1 380 48.2
Gohir.D06G093700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.2e-93 346.7 381 47.2
PGR044G0887 Punica granatum HOM05D003951 ORTHO05D005378 2.2e-93 346.7 378 47.1
Peaxi162Scf01195g00118 Petunia axillaris HOM05D003951 ORTHO05D005378 2.8e-93 346.3 380 48.4
Gorai.010G108200 Gossypium raimondii HOM05D003951 ORTHO05D005378 3.7e-93 345.9 381 47.0
Lj1g0011830 Lotus japonicus HOM05D003951 ORTHO05D005378 8.3e-93 344.7 380 48.7
MD15G1095600 Malus domestica HOM05D003951 ORTHO05D005378 1.1e-92 344.4 380 46.3
FvH4_2g35850 Fragaria vesca HOM05D003951 ORTHO05D005378 1.4e-92 344.0 380 47.6
Medtr3g110140 Medicago truncatula HOM05D003951 ORTHO05D005378 1.4e-92 344.0 380 47.4
Nitab4.5_0004281g0080 Nicotiana tabacum HOM05D003951 ORTHO05D005378 3.1e-92 342.8 380 48.2
Gohir.A06G094100 Gossypium hirsutum HOM05D003951 ORTHO05D005378 4.1e-92 342.4 381 46.7
Nitab4.5_0008726g0020 Nicotiana tabacum HOM05D003951 ORTHO05D005378 5.4e-92 342.0 380 48.4
MD08G1115900 Malus domestica HOM05D003951 ORTHO05D005378 1.2e-91 340.9 380 46.6
Potri.018G039800 Populus trichocarpa HOM05D003951 ORTHO05D005378 2.0e-91 340.1 380 45.3
vmacro10453 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 4.5e-91 339.0 389 48.8
Atru.chr7.2135 Acer truncatum HOM05D003951 ORTHO05D005378 5.9e-91 338.6 380 47.6
Manes.03G061800 Manihot esculenta HOM05D003951 ORTHO05D005378 5.9e-91 338.6 380 45.8
CiPaw.08G024600 Carya illinoinensis HOM05D003951 ORTHO05D005378 7.7e-91 338.2 373 47.5
Gohir.D08G272000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 7.7e-91 338.2 380 45.8
FAN27G3265 Fragaria x ananassa HOM05D003951 ORTHO05D005378 1.3e-90 337.4 380 46.8
Gorai.004G290400 Gossypium raimondii HOM05D003951 ORTHO05D005378 1.3e-90 337.4 380 45.8
FAN15G0863 Fragaria x ananassa HOM05D003951 ORTHO05D005378 2.2e-90 336.7 380 46.6
FAN20G1017 Fragaria x ananassa HOM05D003951 ORTHO05D005378 2.2e-90 336.7 380 46.8
HanXRQChr08g0221151 Helianthus annuus HOM05D003951 ORTHO05D005378 2.2e-90 336.7 382 47.6
CANSAT25G2930 Cannabis sativa HOM05D003951 ORTHO05D005378 3.8e-90 335.9 377 48.5
Ciclev10007348m.g Citrus clementina HOM05D003951 ORTHO05D005378 3.8e-90 335.9 381 47.2
Gohir.D13G192700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 3.8e-90 335.9 382 45.3
Gohir.A08G250500 Gossypium hirsutum HOM05D003951 ORTHO05D005378 5.0e-90 335.5 380 45.3
BcaNung01934 Brassica carinata HOM05D003951 ORTHO05D005378 6.5e-90 335.1 380 47.4
Aqoxy7G01531 Aquilegia oxysepala HOM05D003951 ORTHO05D005378 1.1e-89 334.3 380 45.3
Gorai.013G218700 Gossypium raimondii HOM05D003951 ORTHO05D005378 1.1e-89 334.3 375 45.1
Sabra18G0039700 Salix brachista HOM05D003951 ORTHO05D005378 1.1e-89 334.3 376 45.7
PGSC0003DMG400012982 Solanum tuberosum HOM05D003951 ORTHO05D005378 4.2e-89 332.4 380 46.6
AL6G22230 Arabidopsis lyrata HOM05D003951 ORTHO05D005378 5.5e-89 332.0 380 47.1
CARHR201660 Cardamine hirsuta HOM05D003951 ORTHO05D005378 5.5e-89 332.0 380 47.6
Cc06_g04830 Coffea canephora HOM05D003951 ORTHO05D005378 5.5e-89 332.0 371 47.7
Thhalv10012570m.g Eutrema salsugineum HOM05D003951 ORTHO05D005378 5.5e-89 332.0 380 47.4
ECA233G3193 Erigeron canadensis HOM05D003951 ORTHO05D005378 2.8e-88 329.7 350 48.6
Solyc09g008610.4 Solanum lycopersicum HOM05D003951 ORTHO05D005378 2.8e-88 329.7 380 46.3
AT5G11560 Arabidopsis thaliana HOM05D003951 ORTHO05D005378 3.6e-88 329.3 380 46.8
Dinv14244 Davidia involucrata HOM05D003951 ORTHO05D005378 3.6e-88 329.3 348 49.7
Gohir.A13G186000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 6.1e-88 328.6 382 44.5
Potri.006G240300 Populus trichocarpa HOM05D003951 ORTHO05D005378 1.4e-87 327.4 380 44.5
A02p01070 Brassica napus HOM05D003951 ORTHO05D005378 2.3e-87 326.6 380 46.1
A10p26200 Brassica napus HOM05D003951 ORTHO05D005378 3.0e-87 326.2 380 46.8
Sc23g0005190 Simmondsia chinensis HOM05D003951 ORTHO05D005378 3.0e-87 326.2 380 45.3
BcaB08g37043 Brassica carinata HOM05D003951 ORTHO05D005378 5.2e-87 325.5 380 46.8
MBI04_g14936_MAGBIO Magnolia biondii HOM05D003951 ORTHO05D005378 5.2e-87 325.5 379 47.0
Sopen09g003410 Solanum pennellii HOM05D003951 ORTHO05D005378 5.2e-87 325.5 383 46.0
C09p65250 Brassica napus HOM05D003951 ORTHO05D005378 6.8e-87 325.1 378 46.6
BcaC04g19214 Brassica carinata HOM05D003951 ORTHO05D005378 8.8e-87 324.7 378 46.6
Carub.0006s1003 Capsella rubella HOM05D003951 ORTHO05D005378 8.8e-87 324.7 380 46.3
BcaC03g13375 Brassica carinata HOM05D003951 ORTHO05D005378 1.5e-86 323.9 380 45.8
DCAR_004489 Daucus carota HOM05D003951 ORTHO05D005378 1.5e-86 323.9 400 45.5
Lsat_1_v5_gn_6_63741 Lactuca sativa HOM05D003951 ORTHO05D005378 5.7e-86 322.0 404 45.0
Sp6g32040 Schrenkiella parvula HOM05D003951 ORTHO05D005378 9.8e-86 321.2 380 46.3
C02p05210 Brassica napus HOM05D003951 ORTHO05D005378 1.7e-85 320.5 380 46.1
Haze_16526 Corylus avellana HOM05D003951 ORTHO05D005378 2.8e-85 319.7 344 47.7
CANSAT56G2409 Cannabis sativa HOM05D003951 ORTHO05D005378 3.7e-85 319.3 384 46.1
EL10Ac2g04048 Beta vulgaris HOM05D003951 ORTHO05D005378 6.3e-85 318.5 380 45.8
TWI32G0786 Tripterygium wilfordii HOM05D003951 ORTHO05D005378 1.8e-84 317.0 380 43.7
BraA02t05087Z Brassica rapa HOM05D003951 ORTHO05D005378 2.4e-84 316.6 395 44.3
CANSAT56G0789 Cannabis sativa HOM05D003951 ORTHO05D005378 3.1e-84 316.2 384 46.1
BolC2t06471H Brassica oleracea HOM05D003951 ORTHO05D005378 4.1e-84 315.8 395 44.6
Eucgr.C02905 Eucalyptus grandis HOM05D003951 ORTHO05D005378 9.2e-84 314.7 377 43.8
Sed0007642 Sechium edule HOM05D003951 ORTHO05D005378 9.2e-84 314.7 376 42.8
BraA10t44677Z Brassica rapa HOM05D003951 ORTHO05D005378 1.2e-83 314.3 400 44.5
Sabra06G0187900 Salix brachista HOM05D003951 ORTHO05D005378 1.6e-83 313.9 403 41.9
MELO3C011151.2 Cucumis melo HOM05D003951 ORTHO05D005378 2.7e-83 313.2 385 42.9
Hund19527 Selenicereus undatus HOM05D003951 ORTHO05D005378 4.5e-83 312.4 380 46.1
ClCG08G012310 Citrullus lanatus HOM05D003951 ORTHO05D005378 7.8e-83 311.6 385 42.6
Actinidia15735 Actinidia chinensis HOM05D003951 ORTHO05D005378 1.3e-82 310.8 317 51.1
CsaV3_2G030980 Cucumis sativus L. HOM05D003951 ORTHO05D005378 2.3e-82 310.1 385 42.9
BolC9t59353H Brassica oleracea HOM05D003951 ORTHO05D005378 6.6e-82 308.5 404 43.6
Sed0024259 Sechium edule HOM05D003951 ORTHO05D005378 8.6e-82 308.1 372 43.0
QL12p029450 Quercus lobata HOM05D003951 ORTHO05D005378 1.9e-81 307.0 380 44.2
THA.LOC104814774 Tarenaya hassleriana HOM05D003951 ORTHO05D005378 2.1e-80 303.5 380 43.4
Ah.16g105540 Amaranthus hybridus HOM05D003951 ORTHO05D005378 8.0e-80 301.6 380 42.6
TAR626G1232 Trochodendron aralioides HOM05D003951 ORTHO05D005378 1.0e-79 301.2 336 45.8
CAN.G1759.1 Capsicum annuum HOM05D003951 ORTHO05D005378 5.2e-79 298.9 347 46.4
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 3.4e-78 296.2 337 46.0
Lj7A704G78 Lonicera japonica HOM05D003951 ORTHO05D005378 1.7e-77 293.9 318 50.6
ATR0315G102 Amborella trichopoda HOM05D003951 ORTHO05D005378 7.0e-76 288.5 360 40.6
AUR62043518 Chenopodium quinoa HOM05D003951 ORTHO05D005378 3.1e-71 273.1 381 42.0
Ah.16g105420 Amaranthus hybridus HOM05D003951 ORTHO05D005378 6.8e-71 271.9 362 42.3
AUR62041721 Chenopodium quinoa HOM05D003951 ORTHO05D005378 1.2e-70 271.2 381 41.7
Os05g0230600 Oryza sativa ssp. japonica HOM05D003951 ORTHO05D005378 3.4e-70 269.6 366 38.8
CDE09G1231 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 9.8e-70 268.1 375 39.7
Zm00001eb284300 Zea mays HOM05D003951 ORTHO05D005378 8.3e-69 265.0 370 38.4
Zm00001eb350390 Zea mays HOM05D003951 ORTHO05D005378 2.0e-67 260.4 376 37.2
CDE02G1137 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 1.3e-61 241.1 349 39.0
Lj8A588G18 Lonicera japonica HOM05D003951 ORTHO05D005378 7.3e-57 225.3 353 38.2
Aa31LG3G15640 Aethionema arabicum HOM05D003951 ORTHO05D005378 3.1e-55 219.9 380 37.1
AUR62009306 Chenopodium quinoa HOM05D003951 ORTHO05D005378 8.9e-55 218.4 380 36.3
Actinidia13321 Actinidia chinensis HOM05D003951 ORTHO05D005378 1.6e-48 197.6 267 41.2
Mapoly0001s0045 Marchantia polymorpha HOM05D003951 ORTHO05D005378 3.6e-48 196.4 385 34.3
Pp3c24_6940 Physcomitrium patens HOM05D003951 ORTHO05D005378 1.4e-44 184.5 383 33.4
Hma1.2p1_1163F.1_g262790 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 9.3e-44 181.8 292 37.0
HPP92_003925 Vanilla planifolia HOM05D003951 ORTHO05D005378 9.3e-44 181.8 188 48.9
BcaB01g05472 Brassica carinata HOM05D003951 ORTHO05D020105 2.6e-38 163.7 109 71.6
C03p05850 Brassica napus HOM05D003951 ORTHO05D020105 2.6e-38 163.7 109 71.6
BolC3t13097H Brassica oleracea HOM05D003951 ORTHO05D020105 4.5e-38 162.9 109 71.6
SMO361G0709 Selaginella moellendorffii HOM05D003951 ORTHO05D005378 4.6e-35 152.9 344 31.1
AagrBONN_evm.TU.Sc2ySwM_228.1359 Anthoceros agrestis HOM05D003951 ORTHO05D005378 7.4e-33 145.6 382 29.1
Medtr3g110090 Medicago truncatula HOM05D003951 ORTHO05D005378 2.8e-32 143.7 237 33.8
CBR_g46228 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-28 131.7 232 34.9
Psat2g043440 Pisum sativum HOM05D003951 ORTHO05D005378 1.4e-28 131.3 271 30.3
SGA_v2.0_scaffold40G15445 Striga asiatica HOM05D003951 ORTHO05D005378 3.0e-26 123.6 274 30.7
Ah.10g035090 Amaranthus hybridus HOM05D003951 ORTHO05D005378 1.5e-25 121.3 234 32.1
Nn3g18130 Nelumbo nucifera HOM05D003951 ORTHO05D020105 1.8e-18 97.8 72 63.9
CiPaw.07G205500 Carya illinoinensis HOM05D003951 ORTHO05D020105 3.9e-18 96.7 71 62.0
SHI18663 Sapria himalayana HOM05D003951 ORTHO05D005378 7.4e-17 92.4 139 37.4
PRCOL_00001466 Prasinoderma coloniale HOM05D003951 ORTHO05D005378 1.3e-16 91.7 222 29.7
SHI18664 Sapria himalayana HOM05D003951 ORTHO05D020105 4.1e-15 86.7 138 38.4
Lj6g0012970 Lotus japonicus HOM05D003951 ORTHO05D006115 7.6e-14 82.4 139 33.1
Psat6g121680 Pisum sativum HOM05D000840 ORTHO05D000670 8.5e-13 79.0 67 55.2
Psat1g107320 Pisum sativum HOM05D001108 ORTHO05D001619 2.5e-09 67.4 107 34.6
Psat0s4854g0040 Pisum sativum HOM05D001108 ORTHO05D001619 2.8e-08 63.9 114 33.3


User provided reference genes

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