Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 2.0e-109 399.1 195 100.0
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 7.3e-59 231.1 205 63.4
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 2.6e-56 222.6 135 77.8
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 5.8e-56 221.5 188 60.6
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 7.5e-56 221.1 156 69.2
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 9.8e-56 220.7 137 77.4
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 3.7e-55 218.8 133 76.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 6.4e-55 218.0 123 81.3
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 6.4e-55 218.0 122 81.1
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 6.4e-55 218.0 196 59.7
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 8.3e-55 217.6 205 59.5
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 1.1e-54 217.2 163 67.5
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.4e-54 216.9 151 70.2
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 1.9e-54 216.5 203 59.1
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 2.4e-54 216.1 191 60.7
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 2.4e-54 216.1 117 85.5
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 4.1e-54 215.3 117 84.6
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 4.1e-54 215.3 117 83.8
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 5.4e-54 214.9 186 59.7
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 7.0e-54 214.5 190 59.5
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 9.2e-54 214.2 199 58.3
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 9.2e-54 214.2 117 82.9
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.2e-53 213.8 124 79.8
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.6e-53 213.4 203 56.7
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 1.6e-53 213.4 123 80.5
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.6e-53 213.4 166 65.1
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 2.0e-53 213.0 184 58.7
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 2.7e-53 212.6 117 82.9
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.7e-53 212.6 122 79.5
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.7e-53 212.6 137 75.2
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 4.6e-53 211.8 132 75.8
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 4.6e-53 211.8 204 59.8
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 4.6e-53 211.8 156 68.6
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 6.0e-53 211.5 141 73.8
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 7.8e-53 211.1 122 80.3
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 1.0e-52 210.7 128 78.1
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 1.3e-52 210.3 117 81.2
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 1.7e-52 209.9 117 82.9
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 6.6e-52 208.0 117 82.1
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 8.6e-52 207.6 123 80.5
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.5e-51 206.1 145 67.6
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 2.5e-51 206.1 168 61.9
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 3.3e-51 205.7 168 61.3
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 3.3e-51 205.7 204 55.4
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 3.3e-51 205.7 204 55.4
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 5.6e-51 204.9 204 55.4
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 5.6e-51 204.9 204 55.4
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 9.5e-51 204.1 123 77.2
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.2e-50 203.8 137 70.1
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 1.2e-50 203.8 205 56.1
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 2.8e-50 202.6 164 65.2
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 3.6e-50 202.2 124 75.8
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 3.6e-50 202.2 205 55.6
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 4.7e-50 201.8 123 76.4
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 8.1e-50 201.1 220 51.8
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 2.3e-49 199.5 123 74.8
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 3.1e-49 199.1 120 77.5
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 5.2e-49 198.4 137 66.4
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 5.2e-49 198.4 200 54.5
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 6.8e-49 198.0 123 74.0
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 6.8e-49 198.0 117 77.8
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 8.9e-49 197.6 117 78.6
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.2e-48 197.2 197 55.8
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 1.2e-48 197.2 115 77.4
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 4.4e-48 195.3 121 73.6
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 4.4e-48 195.3 137 67.2
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 4.4e-48 195.3 142 66.2
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 5.8e-48 194.9 126 72.2
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 7.5e-48 194.5 193 53.9
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 9.9e-48 194.1 175 60.0
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.3e-47 193.7 134 70.1
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.3e-47 193.7 160 64.4
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 4.9e-47 191.8 133 68.4
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 4.9e-47 191.8 117 76.1
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 6.4e-47 191.4 118 77.1
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 6.4e-47 191.4 122 73.8
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 8.3e-47 191.0 131 67.2
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 8.3e-47 191.0 122 73.8
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 2.1e-45 186.4 118 73.7
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 3.5e-45 185.7 156 64.1
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 4.6e-45 185.3 115 73.0
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 7.8e-45 184.5 171 60.8
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.3e-44 183.7 187 54.0
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 4.0e-41 172.2 135 63.7
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 2.0e-40 169.9 172 57.6
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.0e-40 169.9 115 67.0
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 3.4e-40 169.1 124 65.3
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 4.4e-40 168.7 122 64.8
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 7.8e-37 157.9 191 46.6
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.1e-35 154.1 115 63.5
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.5e-35 153.7 117 63.2
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 5.2e-33 145.2 153 52.9
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.4e-32 142.5 199 43.2
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 5.3e-25 118.6 65 84.6
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.5e-24 117.1 67 82.1
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 3.4e-24 115.9 64 85.9
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 2.9e-23 112.8 80 67.5
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 1.8e-20 103.6 59 78.0
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 8.2e-10 68.2 52 59.6
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 4.5e-08 62.4 44 68.2
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 5.8e-08 62.0 36 75.0


User provided reference genes

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