Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g21031 Utricularia gibba HOM05D002160 ORTHO05D002012 7.2e-34 146.7 78 100.0
unitig_744.g24657 Utricularia gibba HOM05D002160 ORTHO05D002012 5.9e-28 127.1 78 85.9
Oeu049244.1 Olea europaea HOM05D002160 ORTHO05D002012 3.0e-16 88.2 84 59.5
SGA_v2.0_scaffold35G14233 Striga asiatica HOM05D000119 ORTHO05D000054 5.2e-16 87.4 81 67.9
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 2.6e-15 85.1 79 62.0
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 4.4e-15 84.3 79 60.8
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 4.4e-15 84.3 79 62.0
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 5.7e-15 84.0 79 62.0
Oeu051930.1 Olea europaea HOM05D002160 ORTHO05D002012 7.5e-15 83.6 84 50.0
Gorai.002G257700 Gossypium raimondii HOM05D002160 ORTHO05D002012 9.8e-15 83.2 79 60.8
Migut.J00330 Erythranthe guttata HOM05D002160 ORTHO05D002012 1.3e-14 82.8 81 53.1
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 2.2e-14 82.0 82 58.5
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 2.9e-14 81.6 81 60.5
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.7e-14 81.3 80 55.0
Gohir.D01G211900 Gossypium hirsutum HOM05D002160 ORTHO05D002012 3.7e-14 81.3 83 59.0
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 4.9e-14 80.9 79 59.5
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 4.9e-14 80.9 80 63.8
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 6.3e-14 80.5 79 60.8
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 6.3e-14 80.5 80 63.8
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 6.3e-14 80.5 79 60.8
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 8.3e-14 80.1 79 59.5
SalBow3G1804 Salvia bowleyana HOM05D002160 ORTHO05D002012 8.3e-14 80.1 82 62.2
Psat3g140160 Pisum sativum HOM05D002160 ORTHO05D002012 1.4e-13 79.3 78 59.0
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 1.8e-13 79.0 79 58.2
TWI31G0007 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.8e-13 79.0 79 63.3
Migut.L01944 Erythranthe guttata HOM05D002160 ORTHO05D002012 2.4e-13 78.6 80 61.2
TWI31G0178 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 2.4e-13 78.6 79 62.0
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 3.2e-13 78.2 81 61.7
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 3.2e-13 78.2 80 61.2
Lsat_1_v5_gn_7_83340 Lactuca sativa HOM05D002160 ORTHO05D002012 5.4e-13 77.4 80 60.0
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.0e-13 77.0 79 59.5
Manes.08G079000 Manihot esculenta HOM05D002160 ORTHO05D002012 7.0e-13 77.0 80 57.5
Eucgr.A01262 Eucalyptus grandis HOM05D002160 ORTHO05D002012 9.2e-13 76.6 81 59.3
TWI79G1473 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 9.2e-13 76.6 79 62.0
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 1.2e-12 76.3 79 59.5
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 1.2e-12 76.3 83 55.4
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.6e-12 75.9 80 57.5
CsaV3_3G034920 Cucumis sativus L. HOM05D002160 ORTHO05D002012 2.0e-12 75.5 81 65.4
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 2.7e-12 75.1 81 60.5
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 2.7e-12 75.1 81 60.5
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 2.7e-12 75.1 79 57.0
Potri.006G085200 Populus trichocarpa HOM05D002160 ORTHO05D002012 2.7e-12 75.1 80 57.5
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 3.5e-12 74.7 80 57.5
MD12G1141500 Malus domestica HOM05D002160 ORTHO05D002012 3.5e-12 74.7 78 56.4
Potri.009G030800 Populus trichocarpa HOM05D002160 ORTHO05D002012 3.5e-12 74.7 81 60.5
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 3.5e-12 74.7 80 58.8
THA.LOC104816271 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 3.5e-12 74.7 83 62.7
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 4.6e-12 74.3 79 58.2
MELO3C009260.2 Cucumis melo HOM05D002160 ORTHO05D002012 4.6e-12 74.3 81 64.2
Manes.08G079262 Manihot esculenta HOM05D002160 ORTHO05D002012 4.6e-12 74.3 83 57.8
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 4.6e-12 74.3 80 56.2
Sed0021463 Sechium edule HOM05D002160 ORTHO05D002012 4.6e-12 74.3 81 59.3
EL10Ac1g00022 Beta vulgaris HOM05D002160 ORTHO05D002012 5.9e-12 73.9 80 57.5
TPR.G23304 Trifolium pratense HOM05D002160 ORTHO05D002012 5.9e-12 73.9 78 53.8
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 7.8e-12 73.6 79 48.1
Medtr7g061018 Medicago truncatula HOM05D002160 ORTHO05D002012 1.0e-11 73.2 79 58.2
SEGI_28885 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 1.0e-11 73.2 79 57.0
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.3e-11 72.8 79 57.0
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 1.3e-11 72.8 80 55.0
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 1.7e-11 72.4 79 58.2
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.7e-11 72.4 73 49.3
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 1.7e-11 72.4 78 56.4
Aqoxy4G02920 Aquilegia oxysepala HOM05D002160 ORTHO05D002012 2.3e-11 72.0 80 57.5
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 2.3e-11 72.0 76 56.6
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 2.3e-11 72.0 79 57.0
BcaC05g29516 Brassica carinata HOM05D002160 ORTHO05D002012 2.9e-11 71.6 82 62.2
CARHR083780 Cardamine hirsuta HOM05D002160 ORTHO05D002012 2.9e-11 71.6 82 63.4
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.9e-11 71.6 82 59.8
A03p00650 Brassica napus HOM05D002160 ORTHO05D002012 3.9e-11 71.2 86 50.0
BraA03t09455Z Brassica rapa HOM05D002160 ORTHO05D002012 3.9e-11 71.2 86 50.0
CANSAT35G0429 Cannabis sativa HOM05D002160 ORTHO05D002012 3.9e-11 71.2 80 58.8
DCAR_014852 Daucus carota HOM05D002160 ORTHO05D002012 3.9e-11 71.2 81 51.9
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 3.9e-11 71.2 82 45.1
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 3.9e-11 71.2 78 56.4
BcaC06g31984 Brassica carinata HOM05D002160 ORTHO05D002012 5.0e-11 70.9 86 50.0
Cpa.g.sc228.19 Carica papaya HOM05D002160 ORTHO05D002012 5.0e-11 70.9 82 61.0
Sp6g40100 Schrenkiella parvula HOM05D002160 ORTHO05D002012 5.0e-11 70.9 86 50.0
HPP92_006614 Vanilla planifolia HOM05D002160 ORTHO05D002012 5.0e-11 70.9 78 52.6
BcaNung02128 Brassica carinata HOM05D002160 ORTHO05D002012 6.6e-11 70.5 86 50.0
A10p33280 Brassica napus HOM05D002160 ORTHO05D002012 6.6e-11 70.5 86 50.0
C09p74190 Brassica napus HOM05D002160 ORTHO05D002012 6.6e-11 70.5 86 50.0
BolC9t60152H Brassica oleracea HOM05D002160 ORTHO05D002012 6.6e-11 70.5 86 50.0
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 6.6e-11 70.5 79 57.0
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 6.6e-11 70.5 79 57.0
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 6.6e-11 70.5 79 57.0
Thhalv10015167m.g Eutrema salsugineum HOM05D002160 ORTHO05D002012 6.6e-11 70.5 86 50.0
C03p00920 Brassica napus HOM05D002160 ORTHO05D002012 8.6e-11 70.1 86 50.0
BolC3t12655H Brassica oleracea HOM05D002160 ORTHO05D002012 8.6e-11 70.1 86 50.0
Thhalv10022195m.g Eutrema salsugineum HOM05D002160 ORTHO05D002012 8.6e-11 70.1 82 59.8
HPP92_026928 Vanilla planifolia HOM05D002160 ORTHO05D002012 8.6e-11 70.1 79 57.0
C05p58620 Brassica napus HOM05D002160 ORTHO05D002012 1.1e-10 69.7 85 60.0
CAN.G326.9 Capsicum annuum HOM05D002160 ORTHO05D002012 1.1e-10 69.7 79 57.0
Cc06_g02650 Coffea canephora HOM05D002160 ORTHO05D002012 1.1e-10 69.7 83 55.4
Oeu011407.1 Olea europaea HOM05D002160 ORTHO05D002012 1.1e-10 69.7 82 58.5
Sabra06G0064700 Salix brachista HOM05D002160 ORTHO05D002012 1.1e-10 69.7 79 54.4
SEGI_27294 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 1.1e-10 69.7 79 57.0
THA.LOC104823261 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 1.1e-10 69.7 83 57.8
Manes.08G079293 Manihot esculenta HOM05D002160 ORTHO05D002012 1.5e-10 69.3 80 55.0
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 1.5e-10 69.3 80 57.5
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 1.9e-10 68.9 81 58.0
A05p39590 Brassica napus HOM05D002160 ORTHO05D002012 1.9e-10 68.9 85 60.0
BraA05t22740Z Brassica rapa HOM05D002160 ORTHO05D002012 1.9e-10 68.9 85 60.0
Nitab4.5_0006455g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 1.9e-10 68.9 79 53.2
SEGI_13620 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 1.9e-10 68.9 81 55.6
CDE08G0642 Ceratophyllum demersum HOM05D002160 ORTHO05D002012 2.5e-10 68.6 81 55.6
AUR62019082 Chenopodium quinoa HOM05D002160 ORTHO05D002012 2.5e-10 68.6 78 56.4
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.5e-10 68.6 80 51.2
MD04G1128900 Malus domestica HOM05D002160 ORTHO05D002012 2.5e-10 68.6 76 53.9
Aa31LG3G1880 Aethionema arabicum HOM05D002160 ORTHO05D002012 3.3e-10 68.2 84 48.8
CiPaw.10G145400 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.3e-10 68.2 80 53.8
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.3e-10 68.2 79 44.3
CDE02G2904 Ceratophyllum demersum HOM05D002160 ORTHO05D002012 3.3e-10 68.2 80 53.8
Aa31LG1G22420 Aethionema arabicum HOM05D002160 ORTHO05D002012 4.3e-10 67.8 83 57.8
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 4.3e-10 67.8 79 53.2
Eucgr.K03136 Eucalyptus grandis HOM05D002160 ORTHO05D002012 4.3e-10 67.8 78 55.1
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 4.3e-10 67.8 79 54.4
THA.LOC104827014 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 4.3e-10 67.8 82 62.2
BcaC05g29670 Brassica carinata HOM05D002160 ORTHO05D002012 5.6e-10 67.4 85 58.8
BolC5t34512H Brassica oleracea HOM05D002160 ORTHO05D002012 5.6e-10 67.4 85 58.8
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 5.6e-10 67.4 80 52.5
arahy.Tifrunner.gnm1.ann1.02J1VT Arachis hypogaea HOM05D002160 ORTHO05D002012 7.3e-10 67.0 80 55.0
arahy.Tifrunner.gnm1.ann1.8X9BUY Arachis hypogaea HOM05D002160 ORTHO05D002012 7.3e-10 67.0 80 55.0
DCAR_018908 Daucus carota HOM05D002160 ORTHO05D002012 7.3e-10 67.0 79 57.0
Manes.08G079200 Manihot esculenta HOM05D002160 ORTHO05D002012 7.3e-10 67.0 80 52.5
Solyc09g010800.5.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 7.3e-10 67.0 82 54.9
Sopen09g005530 Solanum pennellii HOM05D002160 ORTHO05D002012 7.3e-10 67.0 82 54.9
AT3G09390 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 9.5e-10 66.6 83 57.8
BcaB01g06159 Brassica carinata HOM05D002160 ORTHO05D002012 9.5e-10 66.6 86 47.7
Gohir.D11G345700 Gossypium hirsutum HOM05D002160 ORTHO05D002012 9.5e-10 66.6 77 49.4
Sp3g07770 Schrenkiella parvula HOM05D002160 ORTHO05D002012 9.5e-10 66.6 82 57.3
AL3G20560 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 1.2e-09 66.2 83 56.6
PGSC0003DMG402008909 Solanum tuberosum HOM05D002160 ORTHO05D002012 1.2e-09 66.2 82 54.9
ATR0559G129 Amborella trichopoda HOM05D002160 ORTHO05D002012 1.6e-09 65.9 79 54.4
Carub.0003s0850 Capsella rubella HOM05D002160 ORTHO05D002012 1.6e-09 65.9 84 57.1
ECA236G5071 Erigeron canadensis HOM05D002160 ORTHO05D002012 2.1e-09 65.5 80 47.5
BcaC09g48025 Brassica carinata HOM05D002160 ORTHO05D002012 2.8e-09 65.1 79 58.2
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 2.8e-09 65.1 80 51.2
Sed0014826 Sechium edule HOM05D002160 ORTHO05D002012 2.8e-09 65.1 80 43.8
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 3.6e-09 64.7 80 51.2
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 3.6e-09 64.7 84 54.8
ECA236G3652 Erigeron canadensis HOM05D002160 ORTHO05D002012 3.6e-09 64.7 79 54.4
CARHR211040 Cardamine hirsuta HOM05D002160 ORTHO05D002012 4.7e-09 64.3 81 50.6
MD06G1098000 Malus domestica HOM05D002160 ORTHO05D002012 4.7e-09 64.3 75 52.0
SEGI_22523 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.2e-09 63.9 77 42.9
SEGI_32259 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 6.2e-09 63.9 79 55.7
BcaB03g11601 Brassica carinata HOM05D002160 ORTHO05D002012 8.0e-09 63.5 80 50.0
MD16G1208900 Malus domestica HOM05D002160 ORTHO05D002012 8.0e-09 63.5 76 39.5
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 8.0e-09 63.5 79 54.4
Dinv37173 Davidia involucrata HOM05D002160 ORTHO05D002012 1.0e-08 63.2 85 50.6
TWI74G0912 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.0e-08 63.2 75 56.0
SEGI_29180 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 1.4e-08 62.8 79 53.2
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 1.8e-08 62.4 84 53.6
Gorai.007G376000 Gossypium raimondii HOM05D002160 ORTHO05D002012 1.8e-08 62.4 77 46.8
Lalb_Chr19g0125331 Lupinus albus HOM05D002160 ORTHO05D002012 2.3e-08 62.0 77 51.9
SEGI_28651 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 3.1e-08 61.6 78 51.3
BraA01t04299Z Brassica rapa HOM05D002269 ORTHO05D002421 4.0e-08 61.2 79 57.0
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 4.0e-08 61.2 79 50.6
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 4.0e-08 61.2 80 55.0
Haze_11621 Corylus avellana HOM05D002160 ORTHO05D002012 5.2e-08 60.8 79 55.7
AT5G02380 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 8.9e-08 60.1 84 52.4
SEGI_27338 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 8.9e-08 60.1 78 50.0
SEGI_31010 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 8.9e-08 60.1 78 50.0
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 1.2e-07 59.7 78 48.7
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 1.5e-07 59.3 80 50.0
Gohir.A11G326800 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.6e-07 58.5 79 51.9
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.6e-07 58.5 80 51.2
GSVIVG01027808001 Vitis vinifera HOM05D002160 ORTHO05D002012 2.6e-07 58.5 82 50.0
Aqoxy2G02118 Aquilegia oxysepala HOM05D002160 ORTHO05D002012 9.8e-07 56.6 58 51.7
BcaC01g04233 Brassica carinata HOM05D002160 ORTHO05D002012 1.3e-06 56.2 80 43.8
A01p42320 Brassica napus HOM05D000351 ORTHO05D000250 1.3e-06 56.2 79 54.4
A03p35970 Brassica napus HOM05D002160 ORTHO05D002012 1.7e-06 55.8 80 42.5
Dinv35604 Davidia involucrata HOM05D002160 ORTHO05D002012 1.7e-06 55.8 56 48.2
CSS0026015 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 2.9e-06 55.1 95 46.3
Medtr4g021730 Medicago truncatula HOM05D002160 ORTHO05D002012 2.9e-06 55.1 74 50.0
SHI12670 Sapria himalayana HOM05D002160 ORTHO05D002012 3.7e-06 54.7 76 52.6
Hund10660 Selenicereus undatus HOM05D002160 ORTHO05D002012 4.9e-06 54.3 59 50.8
C03p43610 Brassica napus HOM05D002160 ORTHO05D002012 6.4e-06 53.9 80 41.2
Prupe.6G077800 Prunus persica HOM05D002160 ORTHO05D002012 6.4e-06 53.9 77 51.9
Atru.chr3.3900 Acer truncatum HOM05D002160 ORTHO05D002012 8.3e-06 53.5 82 48.8
Atru.chr3.3901 Acer truncatum HOM05D002160 ORTHO05D002012 8.3e-06 53.5 82 48.8
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 8.3e-06 53.5 101 40.6
Zm00001eb124800 Zea mays HOM05D002160 ORTHO05D002012 8.3e-06 53.5 56 50.0


User provided reference genes

Program Settings