Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.8e-66 255.8 130 100.0
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 6.2e-38 161.0 138 65.2
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 3.1e-37 158.7 106 75.5
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 3.1e-37 158.7 142 64.8
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 6.8e-37 157.5 131 67.9
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 1.2e-36 156.8 109 72.5
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.5e-36 156.4 130 68.5
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.5e-36 156.4 93 81.7
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 4.4e-36 154.8 136 65.4
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 4.4e-36 154.8 107 74.8
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 5.8e-36 154.5 96 81.2
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 5.8e-36 154.5 86 89.5
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 9.8e-36 153.7 95 78.9
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 9.8e-36 153.7 96 81.2
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 9.8e-36 153.7 96 81.2
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 9.8e-36 153.7 88 84.1
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.3e-35 153.3 102 77.5
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 1.7e-35 152.9 144 61.1
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.7e-35 152.9 86 87.2
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.7e-35 152.9 92 82.6
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.7e-35 152.9 107 72.0
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.2e-35 152.5 106 77.4
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 2.9e-35 152.1 111 71.2
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.9e-35 152.1 135 64.4
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 3.7e-35 151.8 100 76.0
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 3.7e-35 151.8 89 84.3
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 4.9e-35 151.4 139 64.0
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 4.9e-35 151.4 85 85.9
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 6.4e-35 151.0 98 75.5
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 6.4e-35 151.0 137 63.5
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 6.4e-35 151.0 134 63.4
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 8.3e-35 150.6 100 74.0
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 8.3e-35 150.6 107 74.8
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 8.3e-35 150.6 96 79.2
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 8.3e-35 150.6 89 84.3
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.1e-34 150.2 135 63.7
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.4e-34 149.8 86 82.6
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.9e-34 149.4 94 78.7
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.9e-34 149.4 85 87.1
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 2.4e-34 149.1 118 68.6
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 3.2e-34 148.7 99 76.8
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 3.2e-34 148.7 118 66.1
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 3.2e-34 148.7 92 80.4
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 4.1e-34 148.3 136 62.5
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 4.1e-34 148.3 86 83.7
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.1e-34 148.3 119 67.2
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 5.4e-34 147.9 133 64.7
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 5.4e-34 147.9 96 77.1
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 5.4e-34 147.9 86 84.9
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 7.0e-34 147.5 138 60.9
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 9.2e-34 147.1 93 79.6
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 9.2e-34 147.1 124 64.5
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 9.2e-34 147.1 84 84.5
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.2e-33 146.7 85 83.5
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 2.1e-33 146.0 89 82.0
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 2.1e-33 146.0 109 69.7
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 2.1e-33 146.0 107 71.0
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 2.1e-33 146.0 107 71.0
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 2.1e-33 146.0 109 69.7
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.7e-33 145.6 97 74.2
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 4.6e-33 144.8 126 61.9
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 4.6e-33 144.8 120 63.3
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 4.6e-33 144.8 113 66.4
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 6.0e-33 144.4 96 74.0
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 6.0e-33 144.4 96 74.0
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 6.0e-33 144.4 110 70.0
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.0e-33 144.4 110 70.0
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.0e-33 144.4 110 70.0
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.0e-33 144.4 110 70.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 6.0e-33 144.4 130 60.8
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 7.8e-33 144.1 86 83.7
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.0e-32 143.7 96 75.0
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.3e-32 143.3 96 75.0
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.3e-32 143.3 83 83.1
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 1.3e-32 143.3 113 65.5
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 1.3e-32 143.3 136 60.3
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 1.7e-32 142.9 83 85.5
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 2.3e-32 142.5 92 75.0
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 2.3e-32 142.5 85 81.2
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 3.9e-32 141.7 85 80.0
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 3.9e-32 141.7 110 70.0
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 3.9e-32 141.7 142 55.6
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 5.1e-32 141.4 96 72.9
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 5.1e-32 141.4 86 79.1
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 6.6e-32 141.0 89 78.7
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 8.6e-32 140.6 130 58.5
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.1e-31 140.2 88 77.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.5e-31 139.8 89 76.4
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.9e-31 139.4 82 81.7
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.9e-31 139.4 84 78.6
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 4.3e-31 138.3 84 81.0
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 5.6e-31 137.9 90 71.1
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 7.3e-31 137.5 82 79.3
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 7.3e-31 137.5 109 67.9
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.2e-30 136.7 128 57.0
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.6e-30 136.3 134 54.5
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 6.2e-30 134.4 109 63.3
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 6.8e-29 131.0 86 73.3
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.3e-27 126.7 97 71.1
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 8.3e-27 124.0 85 69.4
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.1e-26 123.6 84 72.6
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.1e-23 113.6 85 67.1
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.5e-20 103.2 102 58.8
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 3.9e-16 88.6 46 87.0
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 5.6e-15 84.7 46 82.6
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 8.7e-08 60.8 39 74.4
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 7.3e-07 57.8 87 44.8


User provided reference genes

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